RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
CTDSPL-201ENST00000273179 RAI14Q9P0K7 980 aa10.92□□□□□ -0.66
CTDSPL-201ENST00000273179 CCDC172P0C7W6 258 aa10.92□□□□□ -0.66
CTDSPL-201ENST00000273179 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
CTDSPL-201ENST00000273179 GPBP1L1Q9HC44 474 aaPredicted RBP10.92□□□□□ -0.66
CTDSPL-201ENST00000273179 WDHD1O75717 1129 aaPredicted RBP10.91□□□□□ -0.66
CTDSPL-201ENST00000273179 ANAPC4Q9UJX5 808 aa10.91□□□□□ -0.66
CTDSPL-201ENST00000273179 URB2Q14146 1524 aaKnown RBP10.91□□□□□ -0.66
CTDSPL-201ENST00000273179 ZKSCAN2Q63HK3 967 aa10.91□□□□□ -0.66
CTDSPL-201ENST00000273179 HSP90AB2PQ58FF8 381 aa10.9□□□□□ -0.66
CTDSPL-201ENST00000273179 CALCOCO1Q9P1Z2 691 aa10.9□□□□□ -0.66
CTDSPL-201ENST00000273179 ZRANB2O95218 330 aaKnown RBP eCLIP10.9□□□□□ -0.66
CTDSPL-201ENST00000273179 RRAGDQ9NQL2 400 aaPredicted RBP10.9□□□□□ -0.66
CTDSPL-201ENST00000273179 WASHC2AQ641Q2 1341 aa10.9□□□□□ -0.66
CTDSPL-201ENST00000273179 CTR9Q6PD62 1173 aa10.9□□□□□ -0.66
CTDSPL-201ENST00000273179 CCDC34Q96HJ3 373 aa10.9□□□□□ -0.66
CTDSPL-201ENST00000273179 TOMM22Q9NS69 142 aa10.9□□□□□ -0.66
CTDSPL-201ENST00000273179 FHOD3Q2V2M9 1422 aa10.9□□□□□ -0.67
CTDSPL-201ENST00000273179 IRF6O14896 467 aa10.9□□□□□ -0.67
CTDSPL-201ENST00000273179 NPM3O75607 178 aaKnown RBP10.9□□□□□ -0.67
CTDSPL-201ENST00000273179 ADRA2BP18089 450 aa10.9□□□□□ -0.67
CTDSPL-201ENST00000273179 CHAF1AQ13111 956 aaPredicted RBP10.89□□□□□ -0.67
CTDSPL-201ENST00000273179 IPO7O95373 1038 aaKnown RBP10.89□□□□□ -0.67
CTDSPL-201ENST00000273179 CBX1P83916 185 aa10.89□□□□□ -0.67
CTDSPL-201ENST00000273179 MSL3Q8N5Y2 521 aaKnown RBP10.89□□□□□ -0.67
CTDSPL-201ENST00000273179 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
CTDSPL-201ENST00000273179 FHAD1B1AJZ9 1412 aa10.89□□□□□ -0.67
CTDSPL-201ENST00000273179 PPME1Q9Y570 386 aa10.89□□□□□ -0.67
CTDSPL-201ENST00000273179 GOPCQ9HD26 462 aa10.88□□□□□ -0.67
CTDSPL-201ENST00000273179 KRBA2Q6ZNG9 492 aa10.87□□□□□ -0.67
CTDSPL-201ENST00000273179 HIRIP3Q9BW71 556 aaPredicted RBP10.87□□□□□ -0.67
CTDSPL-201ENST00000273179 PRDM2Q13029 1718 aa10.87□□□□□ -0.67
CTDSPL-201ENST00000273179 ZKSCAN8Q15776 578 aaPredicted RBP10.87□□□□□ -0.67
CTDSPL-201ENST00000273179 R3HCC1Q9Y3T6 440 aaKnown RBP10.87□□□□□ -0.67
CTDSPL-201ENST00000273179 MICAL1Q8TDZ2 1067 aa10.87□□□□□ -0.67
CTDSPL-201ENST00000273179 TRERF1Q96PN7 1200 aa10.86□□□□□ -0.67
CTDSPL-201ENST00000273179 NBPF3Q9H094 633 aa10.86□□□□□ -0.67
CTDSPL-201ENST00000273179 CTDP1Q9Y5B0 961 aaPredicted RBP10.86□□□□□ -0.67
CTDSPL-201ENST00000273179 CCDC96Q2M329 555 aa10.86□□□□□ -0.67
CTDSPL-201ENST00000273179 CPSF2Q9P2I0 782 aaKnown RBP10.86□□□□□ -0.67
CTDSPL-201ENST00000273179 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
CTDSPL-201ENST00000273179 MYBPC2Q14324 1141 aa10.86□□□□□ -0.67
CTDSPL-201ENST00000273179 PDILTQ8N807 584 aa10.86□□□□□ -0.67
CTDSPL-201ENST00000273179 DNMBPQ6XZF7 1577 aa10.85□□□□□ -0.67
CTDSPL-201ENST00000273179 SSFA2P28290 1259 aa10.85□□□□□ -0.67
CTDSPL-201ENST00000273179 CWC15Q9P013 229 aaKnown RBP10.85□□□□□ -0.67
CTDSPL-201ENST00000273179 SF3A1Q15459 793 aaKnown RBP10.85□□□□□ -0.67
CTDSPL-201ENST00000273179 EFCC1Q9HA90 598 aa10.85□□□□□ -0.67
CTDSPL-201ENST00000273179 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 PPP4R2Q9NY27 417 aa10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 KNSTRNQ9Y448 316 aa10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 ERBB3P21860 1342 aa10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 AQRO60306 1485 aaKnown RBP eCLIP10.84□□□□□ -0.672e-9■■■■■ 31.6
CTDSPL-201ENST00000273179 CCDC175P0C221 793 aa10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 NBPF10Q6P3W6 841 aaKnown RBP10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 MTA3Q9BTC8 594 aa10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 METTL14Q9HCE5 456 aaKnown RBP10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 SCP2P22307 547 aa10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 PPP2R5AQ15172 486 aa10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.84□□□□□ -0.67
CTDSPL-201ENST00000273179 HDGFL1Q5TGJ6 251 aa10.83□□□□□ -0.68
CTDSPL-201ENST00000273179 CCNB3Q8WWL7 1395 aa10.83□□□□□ -0.68
CTDSPL-201ENST00000273179 PDS5BQ9NTI5 1447 aa10.83□□□□□ -0.68
CTDSPL-201ENST00000273179 ESPNB1AK53 854 aa10.83□□□□□ -0.68
CTDSPL-201ENST00000273179 PAX3P23760 479 aa10.83□□□□□ -0.68
CTDSPL-201ENST00000273179 IRAK4Q9NWZ3 460 aa10.83□□□□□ -0.68
CTDSPL-201ENST00000273179 TONSLQ96HA7 1378 aa10.83□□□□□ -0.68
CTDSPL-201ENST00000273179 EPB41L2O43491 1005 aaKnown RBP10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 LONRF3Q496Y0 759 aa10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 MORC4Q8TE76 937 aa10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 CHMP3Q9Y3E7 222 aa10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 IRX5P78411 483 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 NOM1Q5C9Z4 860 aaKnown RBP10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 NFKBIBQ15653 356 aa10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 KIF21AQ7Z4S6 1674 aa10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 TERF1P54274 439 aa10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 BECN1Q14457 450 aa10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 SLC26A8Q96RN1 970 aa10.82□□□□□ -0.68
CTDSPL-201ENST00000273179 DDX49Q9Y6V7 483 aaKnown RBP10.81□□□□□ -0.68
CTDSPL-201ENST00000273179 TAX1BP1Q86VP1 789 aa10.81□□□□□ -0.68
CTDSPL-201ENST00000273179 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 NCAPGQ9BPX3 1015 aa10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 NOL10Q9BSC4 688 aaKnown RBP10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 SMC3Q9UQE7 1217 aa10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 UQCRHLA0A096LP55 91 aa10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 UQCRHP07919 91 aa10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 CASQ1P31415 396 aa10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 INF2Q27J81 1249 aa10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 PHLDB1Q86UU1 1377 aa10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 SETDB1Q15047 1291 aa10.8□□□□□ -0.68
CTDSPL-201ENST00000273179 GAPVD1Q14C86 1478 aa10.79□□□□□ -0.68
CTDSPL-201ENST00000273179 SH3BGRP55822 239 aaPredicted RBP10.79□□□□□ -0.68
CTDSPL-201ENST00000273179 CCDC91Q7Z6B0 441 aa10.79□□□□□ -0.68
CTDSPL-201ENST00000273179 TSPAN18Q96SJ8 248 aa10.79□□□□□ -0.68
CTDSPL-201ENST00000273179 RMI1Q9H9A7 625 aa10.79□□□□□ -0.68
CTDSPL-201ENST00000273179 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
CTDSPL-201ENST00000273179 LAMC3Q9Y6N6 1575 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms