RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 AFAP1Q8N556 730 aa18.08■□□□□ 0.48
PDPK1-201ENST00000268673 LRPPRCP42704 1394 aaKnown RBP18.08■□□□□ 0.48
PDPK1-201ENST00000268673 GRIN2BQ13224 1484 aa18.08■□□□□ 0.48
PDPK1-201ENST00000268673 K7ELQ4 463 aaPredicted RBP18.08■□□□□ 0.48
PDPK1-201ENST00000268673 TBC1D2Q9BYX2 928 aa18.08■□□□□ 0.48
PDPK1-201ENST00000268673 RNF123Q5XPI4 1314 aa18.07■□□□□ 0.48
PDPK1-201ENST00000268673 FOXD4L6Q3SYB3 417 aaPredicted RBP18.07■□□□□ 0.48
PDPK1-201ENST00000268673 FOXD4L3Q6VB84 417 aaPredicted RBP18.07■□□□□ 0.48
PDPK1-201ENST00000268673 GCC1Q96CN9 775 aa18.07■□□□□ 0.48
PDPK1-201ENST00000268673 NKTRP30414 1462 aaKnown RBP18.07■□□□□ 0.48
PDPK1-201ENST00000268673 ABCC5O15440 1437 aa18.07■□□□□ 0.48
PDPK1-201ENST00000268673 HMGN5P82970 282 aaKnown RBP18.07■□□□□ 0.48
PDPK1-201ENST00000268673 CCDC9Q9Y3X0 531 aaKnown RBP18.07■□□□□ 0.48
PDPK1-201ENST00000268673 AMER1Q5JTC6 1135 aaPredicted RBP18.06■□□□□ 0.48
PDPK1-201ENST00000268673 RILPL2Q969X0 211 aa18.06■□□□□ 0.48
PDPK1-201ENST00000268673 DIAPH3Q9NSV4 1193 aa18.06■□□□□ 0.48
PDPK1-201ENST00000268673 GPATCH3Q96I76 525 aa18.06■□□□□ 0.48
PDPK1-201ENST00000268673 TPM4P67936 248 aa18.05■□□□□ 0.48
PDPK1-201ENST00000268673 RBM10P98175 930 aaKnown RBP18.05■□□□□ 0.48
PDPK1-201ENST00000268673 EXOSC9Q06265 439 aaKnown RBP18.05■□□□□ 0.48
PDPK1-201ENST00000268673 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
PDPK1-201ENST00000268673 ZNF771Q7L3S4 317 aaPredicted RBP18.05■□□□□ 0.48
PDPK1-201ENST00000268673 TNNT3P45378 269 aaPredicted RBP18.04■□□□□ 0.48
PDPK1-201ENST00000268673 TULP1O00294 542 aaPredicted RBP18.04■□□□□ 0.48
PDPK1-201ENST00000268673 GNAI1P63096 354 aa18.04■□□□□ 0.48
PDPK1-201ENST00000268673 WWC1Q8IX03 1113 aa18.04■□□□□ 0.48
PDPK1-201ENST00000268673 RNF214Q8ND24 703 aa18.04■□□□□ 0.48
PDPK1-201ENST00000268673 CHMP3Q9Y3E7 222 aa18.04■□□□□ 0.48
PDPK1-201ENST00000268673 CFAP43Q8NDM7 1665 aa18.03■□□□□ 0.48
PDPK1-201ENST00000268673 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
PDPK1-201ENST00000268673 CLCN1P35523 988 aa18.03■□□□□ 0.48
PDPK1-201ENST00000268673 C8orf34Q49A92 452 aa18.03■□□□□ 0.48
PDPK1-201ENST00000268673 ATF7IPQ6VMQ6 1270 aa18.03■□□□□ 0.48
PDPK1-201ENST00000268673 GORABQ5T7V8 394 aa18.02■□□□□ 0.48
PDPK1-201ENST00000268673 PRG4Q92954 1404 aaPredicted RBP18.02■□□□□ 0.48
PDPK1-201ENST00000268673 CDK13Q14004 1512 aaKnown RBP18.02■□□□□ 0.47
PDPK1-201ENST00000268673 MCM2P49736 904 aa18.01■□□□□ 0.47
PDPK1-201ENST00000268673 TPM3P06753 285 aa18.01■□□□□ 0.47
PDPK1-201ENST00000268673 TBC1D32Q96NH3 1257 aa18.01■□□□□ 0.47
PDPK1-201ENST00000268673 GOLGA6L19H0YKK7 550 aa18■□□□□ 0.47
PDPK1-201ENST00000268673 PDCL3Q9H2J4 239 aa18■□□□□ 0.47
PDPK1-201ENST00000268673 ANO2Q9NQ90 1003 aa18■□□□□ 0.47
PDPK1-201ENST00000268673 TSPY26PQ9H489 355 aa18■□□□□ 0.47
PDPK1-201ENST00000268673 TAF7LQ5H9L4 462 aa17.99■□□□□ 0.47
PDPK1-201ENST00000268673 NOB1Q9ULX3 412 aaKnown RBP17.99■□□□□ 0.47
PDPK1-201ENST00000268673 CHD1LQ86WJ1 897 aa17.99■□□□□ 0.47
PDPK1-201ENST00000268673 RARSP54136 660 aaKnown RBP17.98■□□□□ 0.47
PDPK1-201ENST00000268673 UQCRHLA0A096LP55 91 aa17.98■□□□□ 0.47
PDPK1-201ENST00000268673 UQCRHP07919 91 aa17.98■□□□□ 0.47
PDPK1-201ENST00000268673 LETM1O95202 739 aaPredicted RBP17.98■□□□□ 0.47
PDPK1-201ENST00000268673 KIF3AQ9Y496 699 aa17.98■□□□□ 0.47
PDPK1-201ENST00000268673 CFAP70Q5T0N1 1121 aa17.97■□□□□ 0.47
PDPK1-201ENST00000268673 DHX29Q7Z478 1369 aaKnown RBP17.97■□□□□ 0.47
PDPK1-201ENST00000268673 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
PDPK1-201ENST00000268673 XRCC6P12956 609 aaKnown RBP eCLIP17.97■□□□□ 0.47
PDPK1-201ENST00000268673 TMEM132EQ6IEE7 984 aa17.97■□□□□ 0.47
PDPK1-201ENST00000268673 TSR2Q969E8 191 aaKnown RBP17.97■□□□□ 0.47
PDPK1-201ENST00000268673 TEFQ10587 303 aa17.97■□□□□ 0.47
PDPK1-201ENST00000268673 BECN2A8MW95 431 aa17.96■□□□□ 0.47
PDPK1-201ENST00000268673 PARD3Q8TEW0 1356 aa17.96■□□□□ 0.47
PDPK1-201ENST00000268673 IGHDP01880 384 aa17.96■□□□□ 0.46
PDPK1-201ENST00000268673 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
PDPK1-201ENST00000268673 RUFY2Q8WXA3 655 aa17.95■□□□□ 0.46
PDPK1-201ENST00000268673 RALGAPBQ86X10 1494 aa17.95■□□□□ 0.46
PDPK1-201ENST00000268673 NEK4P51957 841 aa17.94■□□□□ 0.46
PDPK1-201ENST00000268673 HSP90B1P14625 803 aaKnown RBP17.94■□□□□ 0.46
PDPK1-201ENST00000268673 GNL2Q13823 731 aaKnown RBP17.94■□□□□ 0.46
PDPK1-201ENST00000268673 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
PDPK1-201ENST00000268673 TNPO1Q92973 898 aaKnown RBP17.93■□□□□ 0.46
PDPK1-201ENST00000268673 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
PDPK1-201ENST00000268673 ZNF592Q92610 1267 aa17.93■□□□□ 0.46
PDPK1-201ENST00000268673 CAMSAP2Q08AD1 1489 aa17.93■□□□□ 0.46
PDPK1-201ENST00000268673 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
PDPK1-201ENST00000268673 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
PDPK1-201ENST00000268673 UGGT2Q9NYU1 1516 aa17.92■□□□□ 0.46
PDPK1-201ENST00000268673 ZKSCAN1P17029 563 aaPredicted RBP17.92■□□□□ 0.46
PDPK1-201ENST00000268673 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
PDPK1-201ENST00000268673 PSME1Q06323 249 aa17.91■□□□□ 0.46
PDPK1-201ENST00000268673 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
PDPK1-201ENST00000268673 ZMYND15Q9H091 742 aa17.91■□□□□ 0.46
PDPK1-201ENST00000268673 H3BQV1 296 aa17.9■□□□□ 0.46
PDPK1-201ENST00000268673 IFFO2Q5TF58 517 aa17.9■□□□□ 0.46
PDPK1-201ENST00000268673 SLC12A5Q9H2X9 1139 aa17.9■□□□□ 0.46
PDPK1-201ENST00000268673 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
PDPK1-201ENST00000268673 GPRASP1Q5JY77 1395 aa17.89■□□□□ 0.45
PDPK1-201ENST00000268673 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.45
PDPK1-201ENST00000268673 GTF2E1P29083 439 aaPredicted RBP17.89■□□□□ 0.45
PDPK1-201ENST00000268673 CTTNBP2Q8WZ74 1663 aa17.89■□□□□ 0.45
PDPK1-201ENST00000268673 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.89■□□□□ 0.45
PDPK1-201ENST00000268673 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
PDPK1-201ENST00000268673 C1orf115Q9H7X2 142 aa17.89■□□□□ 0.45
PDPK1-201ENST00000268673 VPS37CA5D8V6 355 aaPredicted RBP17.88■□□□□ 0.45
PDPK1-201ENST00000268673 ARHGAP5Q13017 1502 aa17.88■□□□□ 0.45
PDPK1-201ENST00000268673 EVA1CP58658 441 aa17.88■□□□□ 0.45
PDPK1-201ENST00000268673 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
PDPK1-201ENST00000268673 CHMP4CQ96CF2 233 aa17.88■□□□□ 0.45
PDPK1-201ENST00000268673 ERC2O15083 957 aa17.87■□□□□ 0.45
PDPK1-201ENST00000268673 SASS6Q6UVJ0 657 aa17.87■□□□□ 0.45
PDPK1-201ENST00000268673 URB2Q14146 1524 aaKnown RBP17.87■□□□□ 0.45
PDPK1-201ENST00000268673 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms