RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 AMER1Q5JTC6 1135 aaPredicted RBP22.32■■□□□ 1.16
TPM1-201ENST00000267996 MRS2Q9HD23 443 aa22.32■■□□□ 1.16
TPM1-201ENST00000267996 BCANQ96GW7 911 aa22.31■■□□□ 1.16
TPM1-201ENST00000267996 KNSTRNQ9Y448 316 aa22.31■■□□□ 1.16
TPM1-201ENST00000267996 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
TPM1-201ENST00000267996 DIP2AQ14689 1571 aa22.29■■□□□ 1.16
TPM1-201ENST00000267996 PLEKHH1Q9ULM0 1364 aa22.29■■□□□ 1.16
TPM1-201ENST00000267996 MINK1Q8N4C8 1332 aaPredicted RBP22.29■■□□□ 1.16
TPM1-201ENST00000267996 BRD4O60885 1362 aaPredicted RBP22.28■■□□□ 1.16
TPM1-201ENST00000267996 CNGB1Q14028 1251 aaPredicted RBP22.28■■□□□ 1.16
TPM1-201ENST00000267996 WAPLQ7Z5K2 1190 aa22.28■■□□□ 1.16
TPM1-201ENST00000267996 CARD14Q9BXL6 1004 aa22.28■■□□□ 1.16
TPM1-201ENST00000267996 NINLQ9Y2I6 1382 aa22.28■■□□□ 1.16
TPM1-201ENST00000267996 SLC12A5Q9H2X9 1139 aa22.26■■□□□ 1.15
TPM1-201ENST00000267996 CABP2Q9NPB3 220 aa22.26■■□□□ 1.15
TPM1-201ENST00000267996 ATAD2Q6PL18 1390 aa22.26■■□□□ 1.15
TPM1-201ENST00000267996 CC2D1BQ5T0F9 858 aaKnown RBP22.26■■□□□ 1.15
TPM1-201ENST00000267996 PTPRUQ92729 1446 aa22.24■■□□□ 1.15
TPM1-201ENST00000267996 NLRP13Q86W25 1043 aa22.24■■□□□ 1.15
TPM1-201ENST00000267996 SLC26A8Q96RN1 970 aa22.24■■□□□ 1.15
TPM1-201ENST00000267996 TMC1Q8TDI8 760 aa22.23■■□□□ 1.15
TPM1-201ENST00000267996 ROBO2Q9HCK4 1378 aa22.23■■□□□ 1.15
TPM1-201ENST00000267996 SRPK2P78362 688 aaKnown RBP22.23■■□□□ 1.15
TPM1-201ENST00000267996 CDK19Q9BWU1 502 aa22.23■■□□□ 1.15
TPM1-201ENST00000267996 ANKRD36BQ8N2N9 1353 aa22.22■■□□□ 1.15
TPM1-201ENST00000267996 ANKLE2Q86XL3 938 aa22.21■■□□□ 1.15
TPM1-201ENST00000267996 USP32Q8NFA0 1604 aa22.21■■□□□ 1.15
TPM1-201ENST00000267996 PIK3R4Q99570 1358 aa22.2■■□□□ 1.14
TPM1-201ENST00000267996 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
TPM1-201ENST00000267996 NSD3Q9BZ95 1437 aa22.19■■□□□ 1.14
TPM1-201ENST00000267996 PTCH1Q13635 1447 aa22.18■■□□□ 1.14
TPM1-201ENST00000267996 WASLO00401 505 aaPredicted RBP22.17■■□□□ 1.14
TPM1-201ENST00000267996 ADGRB2O60241 1585 aa22.17■■□□□ 1.14
TPM1-201ENST00000267996 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
TPM1-201ENST00000267996 FAM9BQ8IZU0 186 aa22.17■■□□□ 1.14
TPM1-201ENST00000267996 AMOTL2Q9Y2J4 779 aa22.17■■□□□ 1.14
TPM1-201ENST00000267996 CD163L1Q9NR16 1453 aa22.15■■□□□ 1.14
TPM1-201ENST00000267996 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.14■■□□□ 1.14
TPM1-201ENST00000267996 PPP2R1AP30153 589 aa22.14■■□□□ 1.14
TPM1-201ENST00000267996 A0A1W2PP64 1363 aa22.14■■□□□ 1.13
TPM1-201ENST00000267996 TERF2IPQ9NYB0 399 aa22.12■■□□□ 1.13
TPM1-201ENST00000267996 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
TPM1-201ENST00000267996 ATP7BP35670 1465 aa22.11■■□□□ 1.13
TPM1-201ENST00000267996 NSD2O96028 1365 aa22.11■■□□□ 1.13
TPM1-201ENST00000267996 CGNL1Q0VF96 1302 aa22.11■■□□□ 1.13
TPM1-201ENST00000267996 CABP1Q9NZU7 370 aa22.1■■□□□ 1.13
TPM1-201ENST00000267996 NPHP4O75161 1426 aaPredicted RBP22.09■■□□□ 1.13
TPM1-201ENST00000267996 CHD2O14647 1828 aaKnown RBP22.08■■□□□ 1.13
TPM1-201ENST00000267996 HDGFL2Q7Z4V5 671 aaPredicted RBP22.07■■□□□ 1.12
TPM1-201ENST00000267996 NUDT16Q96DE0 195 aaKnown RBP22.07■■□□□ 1.12
TPM1-201ENST00000267996 INSRP06213 1382 aa22.06■■□□□ 1.12
TPM1-201ENST00000267996 CCDC61Q9Y6R9 512 aa22.06■■□□□ 1.12
TPM1-201ENST00000267996 CPSF1Q10570 1443 aaKnown RBP22.05■■□□□ 1.12
TPM1-201ENST00000267996 KCNA6P17658 529 aa22.05■■□□□ 1.12
TPM1-201ENST00000267996 PPIP5K1Q6PFW1 1433 aa22.05■■□□□ 1.12
TPM1-201ENST00000267996 PRR36Q9H6K5 1346 aa22.04■■□□□ 1.12
TPM1-201ENST00000267996 KDM4FA0A1W2PPD8 638 aa22.03■■□□□ 1.12
TPM1-201ENST00000267996 MORC1Q86VD1 984 aa22.03■■□□□ 1.12
TPM1-201ENST00000267996 ZBED9Q6R2W3 1325 aa22.03■■□□□ 1.12
TPM1-201ENST00000267996 CDC42BPGQ6DT37 1551 aa22.02■■□□□ 1.12
TPM1-201ENST00000267996 TOPAZ1Q8N9V7 1692 aa22.01■■□□□ 1.11
TPM1-201ENST00000267996 NCKAP5LQ9HCH0 1330 aa22.01■■□□□ 1.11
TPM1-201ENST00000267996 ANKRD26Q9UPS8 1709 aa21.99■■□□□ 1.11
TPM1-201ENST00000267996 FYB1O15117 783 aa21.98■■□□□ 1.11
TPM1-201ENST00000267996 EDC4Q6P2E9 1401 aaKnown RBP21.98■■□□□ 1.11
TPM1-201ENST00000267996 PLEKHG3A1L390 1219 aa21.98■■□□□ 1.11
TPM1-201ENST00000267996 AKAP12Q02952 1782 aa21.97■■□□□ 1.11
TPM1-201ENST00000267996 POLR3AO14802 1390 aaPredicted RBP21.97■■□□□ 1.11
TPM1-201ENST00000267996 MON2Q7Z3U7 1717 aa21.97■■□□□ 1.11
TPM1-201ENST00000267996 NWD1Q149M9 1564 aa21.96■■□□□ 1.11
TPM1-201ENST00000267996 KIF20BQ96Q89 1820 aa21.96■■□□□ 1.11
TPM1-201ENST00000267996 BLMP54132 1417 aaPredicted RBP21.96■■□□□ 1.11
TPM1-201ENST00000267996 ZNF692Q9BU19 519 aaPredicted RBP21.95■■□□□ 1.1
TPM1-201ENST00000267996 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
TPM1-201ENST00000267996 ITSN1Q15811 1721 aa21.94■■□□□ 1.1
TPM1-201ENST00000267996 ANKARQ7Z5J8 1434 aa21.94■■□□□ 1.1
TPM1-201ENST00000267996 GGNBP2Q9H3C7 697 aa21.93■■□□□ 1.1
TPM1-201ENST00000267996 FMN2Q9NZ56 1722 aa21.92■■□□□ 1.1
TPM1-201ENST00000267996 GTF3C3Q9Y5Q9 886 aa21.91■■□□□ 1.1
TPM1-201ENST00000267996 NALCNQ8IZF0 1738 aa21.91■■□□□ 1.1
TPM1-201ENST00000267996 ADAMTS8Q9UP79 889 aa21.91■■□□□ 1.1
TPM1-201ENST00000267996 NKTRP30414 1462 aaKnown RBP21.9■■□□□ 1.1
TPM1-201ENST00000267996 TNNT2P45379 298 aaPredicted RBP21.89■■□□□ 1.1
TPM1-201ENST00000267996 WDR43Q15061 677 aaKnown RBP eCLIP21.89■■□□□ 1.1
TPM1-201ENST00000267996 ADGRL3Q9HAR2 1447 aa21.89■■□□□ 1.09
TPM1-201ENST00000267996 ACEP12821 1306 aa21.89■■□□□ 1.09
TPM1-201ENST00000267996 LMTK3Q96Q04 1460 aa21.88■■□□□ 1.09
TPM1-201ENST00000267996 MTHFSP49914 203 aa21.88■■□□□ 1.09
TPM1-201ENST00000267996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.88■■□□□ 1.09
TPM1-201ENST00000267996 NRKQ7Z2Y5 1582 aa21.88■■□□□ 1.09
TPM1-201ENST00000267996 NUTM2FA1L443 756 aa21.87■■□□□ 1.09
TPM1-201ENST00000267996 USP6P35125 1406 aa21.86■■□□□ 1.09
TPM1-201ENST00000267996 SSH2Q76I76 1423 aa21.86■■□□□ 1.09
TPM1-201ENST00000267996 RGPD8O14715 1765 aaPredicted RBP21.86■■□□□ 1.09
TPM1-201ENST00000267996 SHPRHQ149N8 1683 aa21.86■■□□□ 1.09
TPM1-201ENST00000267996 HSPA2P54652 639 aa21.85■■□□□ 1.09
TPM1-201ENST00000267996 TTC21BQ7Z4L5 1316 aa21.83■■□□□ 1.09
TPM1-201ENST00000267996 NME9Q86XW9 330 aa21.83■■□□□ 1.09
TPM1-201ENST00000267996 CFAP53Q96M91 514 aa21.83■■□□□ 1.09
TPM1-201ENST00000267996 COL3A1P02461 1466 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms