RNA–Protein interactions for RNA: ENST00000266542.8

C1RL-201, Transcript of complement C1r subcomponent like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1RL, Length 3,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-201ENST00000266542 TBC1D2Q9BYX2 928 aa16.66■□□□□ 0.26
C1RL-201ENST00000266542 NRXN1Q9ULB1 1477 aa16.66■□□□□ 0.26
C1RL-201ENST00000266542 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
C1RL-201ENST00000266542 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
C1RL-201ENST00000266542 FSD2A1L4K1 749 aa16.64■□□□□ 0.26
C1RL-201ENST00000266542 RWDD1Q9H446 243 aaPredicted RBP16.64■□□□□ 0.26
C1RL-201ENST00000266542 SPAG9O60271 1321 aaKnown RBP16.64■□□□□ 0.25
C1RL-201ENST00000266542 IFT172Q9UG01 1749 aa16.64■□□□□ 0.25
C1RL-201ENST00000266542 RLBP1P12271 317 aa16.63■□□□□ 0.25
C1RL-201ENST00000266542 CFAP70Q5T0N1 1121 aa16.63■□□□□ 0.25
C1RL-201ENST00000266542 USP32Q8NFA0 1604 aa16.62■□□□□ 0.25
C1RL-201ENST00000266542 SETBP1Q9Y6X0 1596 aa16.62■□□□□ 0.25
C1RL-201ENST00000266542 TCP11L2Q8N4U5 519 aa16.61■□□□□ 0.25
C1RL-201ENST00000266542 RRAGDQ9NQL2 400 aaPredicted RBP16.61■□□□□ 0.25
C1RL-201ENST00000266542 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
C1RL-201ENST00000266542 MCM4P33991 863 aa16.6■□□□□ 0.25
C1RL-201ENST00000266542 ADGRF5Q8IZF2 1346 aa16.59■□□□□ 0.25
C1RL-201ENST00000266542 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
C1RL-201ENST00000266542 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
C1RL-201ENST00000266542 EIF5BO60841 1220 aaKnown RBP16.59■□□□□ 0.25
C1RL-201ENST00000266542 CT47B1P0C2W7 299 aaPredicted RBP16.58■□□□□ 0.25
C1RL-201ENST00000266542 NSD3Q9BZ95 1437 aa16.58■□□□□ 0.25
C1RL-201ENST00000266542 ADGRL1O94910 1474 aa16.58■□□□□ 0.25
C1RL-201ENST00000266542 XRCC6P12956 609 aaKnown RBP eCLIP16.58■□□□□ 0.24
C1RL-201ENST00000266542 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.24
C1RL-201ENST00000266542 MORC1Q86VD1 984 aa16.58■□□□□ 0.24
C1RL-201ENST00000266542 KIF1BO60333 1816 aa16.58■□□□□ 0.24
C1RL-201ENST00000266542 INO80Q9ULG1 1556 aaPredicted RBP16.58■□□□□ 0.24
C1RL-201ENST00000266542 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
C1RL-201ENST00000266542 CHD1O14646 1710 aa16.57■□□□□ 0.24
C1RL-201ENST00000266542 GOLGA6L3A6NEY3 463 aa16.57■□□□□ 0.24
C1RL-201ENST00000266542 CHMP5Q9NZZ3 219 aa16.57■□□□□ 0.24
C1RL-201ENST00000266542 ZC3H13Q5T200 1668 aaKnown RBP16.57■□□□□ 0.24
C1RL-201ENST00000266542 MYH16Q9H6N6 1097 aa16.57■□□□□ 0.24
C1RL-201ENST00000266542 MROH1Q8NDA8 1641 aa16.56■□□□□ 0.24
C1RL-201ENST00000266542 HDAC1Q13547 482 aaPredicted RBP16.55■□□□□ 0.24
C1RL-201ENST00000266542 AFAP1Q8N556 730 aa16.55■□□□□ 0.24
C1RL-201ENST00000266542 ADGRB2O60241 1585 aa16.55■□□□□ 0.24
C1RL-201ENST00000266542 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
C1RL-201ENST00000266542 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
C1RL-201ENST00000266542 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
C1RL-201ENST00000266542 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
C1RL-201ENST00000266542 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
C1RL-201ENST00000266542 PUS7Q96PZ0 661 aaKnown RBP16.54■□□□□ 0.24
C1RL-201ENST00000266542 ISY1Q9ULR0 285 aaKnown RBP16.53■□□□□ 0.24
C1RL-201ENST00000266542 EFCAB6Q5THR3 1501 aa16.53■□□□□ 0.24
C1RL-201ENST00000266542 UGGT1Q9NYU2 1555 aa16.53■□□□□ 0.24
C1RL-201ENST00000266542 NEUROD2Q15784 382 aa16.53■□□□□ 0.24
C1RL-201ENST00000266542 FANCAO15360 1455 aa16.53■□□□□ 0.24
C1RL-201ENST00000266542 NCOA3Q9Y6Q9 1424 aa16.53■□□□□ 0.24
C1RL-201ENST00000266542 CLCN1P35523 988 aa16.52■□□□□ 0.24
C1RL-201ENST00000266542 CFAP53Q96M91 514 aa16.52■□□□□ 0.24
C1RL-201ENST00000266542 DZIP1LQ8IYY4 767 aaKnown RBP16.52■□□□□ 0.24
C1RL-201ENST00000266542 MROH2AA6NES4 1674 aa16.52■□□□□ 0.23
C1RL-201ENST00000266542 LMTK2Q8IWU2 1503 aa16.52■□□□□ 0.23
C1RL-201ENST00000266542 NSD2O96028 1365 aa16.51■□□□□ 0.23
C1RL-201ENST00000266542 DDIT3P35638 169 aa16.51■□□□□ 0.23
C1RL-201ENST00000266542 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
C1RL-201ENST00000266542 ADGRB3O60242 1522 aa16.51■□□□□ 0.23
C1RL-201ENST00000266542 TRAK2O60296 914 aa16.51■□□□□ 0.23
C1RL-201ENST00000266542 MTHFSP49914 203 aa16.51■□□□□ 0.23
C1RL-201ENST00000266542 MRE11P49959 708 aa16.51■□□□□ 0.23
C1RL-201ENST00000266542 BCL2L13Q9BXK5 485 aa16.5■□□□□ 0.23
C1RL-201ENST00000266542 QRICH2Q9H0J4 1663 aa16.5■□□□□ 0.23
C1RL-201ENST00000266542 ADGRB1O14514 1584 aa16.5■□□□□ 0.23
C1RL-201ENST00000266542 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
C1RL-201ENST00000266542 SLC12A5Q9H2X9 1139 aa16.5■□□□□ 0.23
C1RL-201ENST00000266542 ABCA9Q8IUA7 1624 aa16.49■□□□□ 0.23
C1RL-201ENST00000266542 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
C1RL-201ENST00000266542 KIF3BO15066 747 aa16.49■□□□□ 0.23
C1RL-201ENST00000266542 C14orf93Q9H972 538 aaKnown RBP16.49■□□□□ 0.23
C1RL-201ENST00000266542 SNX21Q969T3 373 aa16.48■□□□□ 0.23
C1RL-201ENST00000266542 RBM25P49756 843 aaKnown RBP16.47■□□□□ 0.23
C1RL-201ENST00000266542 DDX19BQ9UMR2 479 aa16.47■□□□□ 0.23
C1RL-201ENST00000266542 NOS1P29475 1434 aa16.47■□□□□ 0.23
C1RL-201ENST00000266542 FTSJ3Q8IY81 847 aaKnown RBP16.47■□□□□ 0.23
C1RL-201ENST00000266542 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
C1RL-201ENST00000266542 PANK2Q9BZ23 570 aa16.46■□□□□ 0.23
C1RL-201ENST00000266542 IL16Q14005 1332 aa16.45■□□□□ 0.22
C1RL-201ENST00000266542 TNNT2P45379 298 aaPredicted RBP16.45■□□□□ 0.22
C1RL-201ENST00000266542 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
C1RL-201ENST00000266542 PPLO60437 1756 aa16.45■□□□□ 0.22
C1RL-201ENST00000266542 TRIM27P14373 513 aa16.45■□□□□ 0.22
C1RL-201ENST00000266542 HSCBQ8IWL3 235 aa16.45■□□□□ 0.22
C1RL-201ENST00000266542 CIZ1Q9ULV3 898 aaPredicted RBP16.45■□□□□ 0.22
C1RL-201ENST00000266542 ANKRD36BQ8N2N9 1353 aa16.45■□□□□ 0.22
C1RL-201ENST00000266542 ATF7IPQ6VMQ6 1270 aa16.44■□□□□ 0.22
C1RL-201ENST00000266542 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
C1RL-201ENST00000266542 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
C1RL-201ENST00000266542 SPRYD3Q8NCJ5 442 aa16.43■□□□□ 0.22
C1RL-201ENST00000266542 ZBTB40Q9NUA8 1239 aa16.43■□□□□ 0.22
C1RL-201ENST00000266542 GRPEL1Q9HAV7 217 aa16.43■□□□□ 0.22
C1RL-201ENST00000266542 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
C1RL-201ENST00000266542 ABCC11Q96J66 1382 aa16.43■□□□□ 0.22
C1RL-201ENST00000266542 U2AF1L5P0DN76 240 aaPredicted RBP16.42■□□□□ 0.22
C1RL-201ENST00000266542 U2AF1Q01081 240 aaKnown RBP eCLIP16.42■□□□□ 0.229e-7■■■■□ 21.6
C1RL-201ENST00000266542 GZF1Q9H116 711 aaPredicted RBP16.42■□□□□ 0.22
C1RL-201ENST00000266542 SMC4Q9NTJ3 1288 aa16.42■□□□□ 0.22
C1RL-201ENST00000266542 RPGRIP1LQ68CZ1 1315 aa16.42■□□□□ 0.22
C1RL-201ENST00000266542 CD109Q6YHK3 1445 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms