RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MINK1Q8N4C8 1332 aaPredicted RBP31.39■■■□□ 2.62
SMARCB1-201ENST00000263121 KDM4FA0A1W2PPD8 638 aa31.39■■■□□ 2.62
SMARCB1-201ENST00000263121 ROBO2Q9HCK4 1378 aa31.37■■■□□ 2.61
SMARCB1-201ENST00000263121 PIK3R4Q99570 1358 aa31.35■■■□□ 2.61
SMARCB1-201ENST00000263121 XRN1Q8IZH2 1706 aaKnown RBP31.35■■■□□ 2.61
SMARCB1-201ENST00000263121 KTN1Q86UP2 1357 aaKnown RBP31.35■■■□□ 2.61
SMARCB1-201ENST00000263121 CABP2Q9NPB3 220 aa31.32■■■□□ 2.6
SMARCB1-201ENST00000263121 PTCH1Q13635 1447 aa31.32■■■□□ 2.6
SMARCB1-201ENST00000263121 NPHP4O75161 1426 aaPredicted RBP31.3■■■□□ 2.6
SMARCB1-201ENST00000263121 AMOTL2Q9Y2J4 779 aa31.3■■■□□ 2.6
SMARCB1-201ENST00000263121 ATAD2Q6PL18 1390 aa31.3■■■□□ 2.6
SMARCB1-201ENST00000263121 SRPK2P78362 688 aaKnown RBP31.29■■■□□ 2.6
SMARCB1-201ENST00000263121 PARD3Q8TEW0 1356 aa31.28■■■□□ 2.6
SMARCB1-201ENST00000263121 NINLQ9Y2I6 1382 aa31.28■■■□□ 2.6
SMARCB1-201ENST00000263121 ADGRB2O60241 1585 aa31.28■■■□□ 2.6
SMARCB1-201ENST00000263121 RALBP1Q15311 655 aa31.28■■■□□ 2.6
SMARCB1-201ENST00000263121 CDK19Q9BWU1 502 aa31.28■■■□□ 2.6
SMARCB1-201ENST00000263121 SLC12A5Q9H2X9 1139 aa31.27■■■□□ 2.6
SMARCB1-201ENST00000263121 KNSTRNQ9Y448 316 aa31.27■■■□□ 2.6
SMARCB1-201ENST00000263121 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.26■■■□□ 2.59
SMARCB1-201ENST00000263121 TMC1Q8TDI8 760 aa31.25■■■□□ 2.59
SMARCB1-201ENST00000263121 CHD2O14647 1828 aaKnown RBP31.24■■■□□ 2.59
SMARCB1-201ENST00000263121 NPC1L1Q9UHC9 1359 aa31.24■■■□□ 2.59
SMARCB1-201ENST00000263121 CNGB1Q14028 1251 aaPredicted RBP31.24■■■□□ 2.59
SMARCB1-201ENST00000263121 AMER1Q5JTC6 1135 aaPredicted RBP31.24■■■□□ 2.59
SMARCB1-201ENST00000263121 YTHDC1Q96MU7 727 aaKnown RBP31.23■■■□□ 2.59
SMARCB1-201ENST00000263121 CARD14Q9BXL6 1004 aa31.23■■■□□ 2.59
SMARCB1-201ENST00000263121 WASLO00401 505 aaPredicted RBP31.22■■■□□ 2.59
SMARCB1-201ENST00000263121 ANKRD36BQ8N2N9 1353 aa31.21■■■□□ 2.59
SMARCB1-201ENST00000263121 NCKAP5LQ9HCH0 1330 aa31.21■■■□□ 2.59
SMARCB1-201ENST00000263121 CCDC184Q52MB2 194 aa31.21■■■□□ 2.59
SMARCB1-201ENST00000263121 CC2D1BQ5T0F9 858 aaKnown RBP31.19■■■□□ 2.58
SMARCB1-201ENST00000263121 MYBBP1AQ9BQG0 1328 aaKnown RBP31.19■■■□□ 2.58
SMARCB1-201ENST00000263121 USP32Q8NFA0 1604 aa31.19■■■□□ 2.58
SMARCB1-201ENST00000263121 NSD3Q9BZ95 1437 aa31.17■■■□□ 2.58
SMARCB1-201ENST00000263121 KCNA6P17658 529 aa31.16■■■□□ 2.58
SMARCB1-201ENST00000263121 LMTK3Q96Q04 1460 aa31.15■■■□□ 2.58
SMARCB1-201ENST00000263121 CD163L1Q9NR16 1453 aa31.15■■■□□ 2.58
SMARCB1-201ENST00000263121 MRS2Q9HD23 443 aa31.15■■■□□ 2.58
SMARCB1-201ENST00000263121 A0A1W2PP64 1363 aa31.13■■■□□ 2.57
SMARCB1-201ENST00000263121 NWD1Q149M9 1564 aa31.12■■■□□ 2.57
SMARCB1-201ENST00000263121 ATP7BP35670 1465 aa31.11■■■□□ 2.57
SMARCB1-201ENST00000263121 BRD4O60885 1362 aaPredicted RBP31.11■■■□□ 2.57
SMARCB1-201ENST00000263121 TERF2IPQ9NYB0 399 aa31.09■■■□□ 2.57
SMARCB1-201ENST00000263121 CABP1Q9NZU7 370 aa31.08■■■□□ 2.57
SMARCB1-201ENST00000263121 NLRP13Q86W25 1043 aa31.07■■■□□ 2.56
SMARCB1-201ENST00000263121 NUDT16Q96DE0 195 aaKnown RBP31.07■■■□□ 2.56
SMARCB1-201ENST00000263121 HSPA2P54652 639 aa31.06■■■□□ 2.56
SMARCB1-201ENST00000263121 TOPAZ1Q8N9V7 1692 aa31.06■■■□□ 2.56
SMARCB1-201ENST00000263121 PPIP5K1Q6PFW1 1433 aa31.06■■■□□ 2.56
SMARCB1-201ENST00000263121 PRR36Q9H6K5 1346 aa31.06■■■□□ 2.56
SMARCB1-201ENST00000263121 CGNL1Q0VF96 1302 aa31.03■■■□□ 2.56
SMARCB1-201ENST00000263121 CCDC61Q9Y6R9 512 aa31.03■■■□□ 2.56
SMARCB1-201ENST00000263121 HDGFL2Q7Z4V5 671 aaPredicted RBP31.03■■■□□ 2.56
SMARCB1-201ENST00000263121 CDC42BPGQ6DT37 1551 aa31.03■■■□□ 2.56
SMARCB1-201ENST00000263121 CPSF1Q10570 1443 aaKnown RBP31.02■■■□□ 2.56
SMARCB1-201ENST00000263121 NSD2O96028 1365 aa31.01■■■□□ 2.56
SMARCB1-201ENST00000263121 NALCNQ8IZF0 1738 aa31.01■■■□□ 2.56
SMARCB1-201ENST00000263121 CENPBP07199 599 aaPredicted RBP31.01■■■□□ 2.55
SMARCB1-201ENST00000263121 PPP2R1AP30153 589 aa30.98■■■□□ 2.55
SMARCB1-201ENST00000263121 STRCQ7RTU9 1775 aa30.98■■■□□ 2.55
SMARCB1-201ENST00000263121 FMN2Q9NZ56 1722 aa30.97■■■□□ 2.55
SMARCB1-201ENST00000263121 AKAP12Q02952 1782 aa30.97■■■□□ 2.55
SMARCB1-201ENST00000263121 NKTRP30414 1462 aaKnown RBP30.96■■■□□ 2.55
SMARCB1-201ENST00000263121 ITSN1Q15811 1721 aa30.96■■■□□ 2.55
SMARCB1-201ENST00000263121 MON2Q7Z3U7 1717 aa30.96■■■□□ 2.55
SMARCB1-201ENST00000263121 PNISRQ8TF01 805 aaKnown RBP30.95■■■□□ 2.55
SMARCB1-201ENST00000263121 ADGRL3Q9HAR2 1447 aa30.95■■■□□ 2.54
SMARCB1-201ENST00000263121 ANKARQ7Z5J8 1434 aa30.94■■■□□ 2.54
SMARCB1-201ENST00000263121 FAM9BQ8IZU0 186 aa30.93■■■□□ 2.54
SMARCB1-201ENST00000263121 ANKRD26Q9UPS8 1709 aa30.93■■■□□ 2.54
SMARCB1-201ENST00000263121 PLEKHG3A1L390 1219 aa30.92■■■□□ 2.54
SMARCB1-201ENST00000263121 KIF20BQ96Q89 1820 aa30.92■■■□□ 2.54
SMARCB1-201ENST00000263121 EDC4Q6P2E9 1401 aaKnown RBP30.91■■■□□ 2.54
SMARCB1-201ENST00000263121 MORC1Q86VD1 984 aa30.9■■■□□ 2.54
SMARCB1-201ENST00000263121 STRCP1A6NGW2 1772 aa30.89■■■□□ 2.54
SMARCB1-201ENST00000263121 NUTM2FA1L443 756 aa30.89■■■□□ 2.54
SMARCB1-201ENST00000263121 RGPD8O14715 1765 aaPredicted RBP30.89■■■□□ 2.54
SMARCB1-201ENST00000263121 FYB1O15117 783 aa30.87■■■□□ 2.53
SMARCB1-201ENST00000263121 ZNF692Q9BU19 519 aaPredicted RBP30.87■■■□□ 2.53
SMARCB1-201ENST00000263121 RBM33Q96EV2 1170 aaKnown RBP30.86■■■□□ 2.53
SMARCB1-201ENST00000263121 NRKQ7Z2Y5 1582 aa30.85■■■□□ 2.53
SMARCB1-201ENST00000263121 ACEP12821 1306 aa30.84■■■□□ 2.53
SMARCB1-201ENST00000263121 PROSER2Q86WR7 435 aaPredicted RBP30.83■■■□□ 2.53
SMARCB1-201ENST00000263121 GGNBP2Q9H3C7 697 aa30.82■■■□□ 2.52
SMARCB1-201ENST00000263121 POLR3AO14802 1390 aaPredicted RBP30.82■■■□□ 2.52
SMARCB1-201ENST00000263121 USP6P35125 1406 aa30.8■■■□□ 2.52
SMARCB1-201ENST00000263121 HNRNPUQ00839 825 aaKnown RBP eCLIP30.8■■■□□ 2.52
SMARCB1-201ENST00000263121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.79■■■□□ 2.527e-7■■□□□ 13.6
SMARCB1-201ENST00000263121 NCOA3Q9Y6Q9 1424 aa30.78■■■□□ 2.52
SMARCB1-201ENST00000263121 SSH2Q76I76 1423 aa30.76■■■□□ 2.52
SMARCB1-201ENST00000263121 INSRP06213 1382 aa30.76■■■□□ 2.51
SMARCB1-201ENST00000263121 C14orf37Q86TY3 774 aa30.76■■■□□ 2.51
SMARCB1-201ENST00000263121 TNNT2P45379 298 aaPredicted RBP30.75■■■□□ 2.51
SMARCB1-201ENST00000263121 PMFBP1Q8TBY8 1022 aa30.74■■■□□ 2.51
SMARCB1-201ENST00000263121 TMEM94Q12767 1356 aa30.73■■■□□ 2.51
SMARCB1-201ENST00000263121 TTC21BQ7Z4L5 1316 aa30.73■■■□□ 2.51
SMARCB1-201ENST00000263121 NME9Q86XW9 330 aa30.72■■■□□ 2.51
SMARCB1-201ENST00000263121 C19orf44Q9H6X5 657 aa30.71■■■□□ 2.51
SMARCB1-201ENST00000263121 NGDNQ8NEJ9 315 aaKnown RBP30.7■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms