RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 ANKLE2Q86XL3 938 aa25.21■■□□□ 1.63
GSDMD-201ENST00000262580 CABP2Q9NPB3 220 aa25.21■■□□□ 1.63
GSDMD-201ENST00000262580 ROBO2Q9HCK4 1378 aa25.2■■□□□ 1.63
GSDMD-201ENST00000262580 PUS7Q96PZ0 661 aaKnown RBP25.19■■□□□ 1.62
GSDMD-201ENST00000262580 SIRT1Q96EB6 747 aa25.18■■□□□ 1.62
GSDMD-201ENST00000262580 XRN1Q8IZH2 1706 aaKnown RBP25.18■■□□□ 1.62
GSDMD-201ENST00000262580 KDM4FA0A1W2PPD8 638 aa25.18■■□□□ 1.62
GSDMD-201ENST00000262580 KTN1Q86UP2 1357 aaKnown RBP25.17■■□□□ 1.62
GSDMD-201ENST00000262580 CCDC184Q52MB2 194 aa25.16■■□□□ 1.62
GSDMD-201ENST00000262580 SRPK2P78362 688 aaKnown RBP25.16■■□□□ 1.62
GSDMD-201ENST00000262580 TMC1Q8TDI8 760 aa25.16■■□□□ 1.62
GSDMD-201ENST00000262580 PARD3Q8TEW0 1356 aa25.15■■□□□ 1.62
GSDMD-201ENST00000262580 SLC12A5Q9H2X9 1139 aa25.14■■□□□ 1.62
GSDMD-201ENST00000262580 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.14■■□□□ 1.61
GSDMD-201ENST00000262580 PTCH1Q13635 1447 aa25.14■■□□□ 1.61
GSDMD-201ENST00000262580 CC2D1BQ5T0F9 858 aaKnown RBP25.13■■□□□ 1.61
GSDMD-201ENST00000262580 AMOTL2Q9Y2J4 779 aa25.13■■□□□ 1.61
GSDMD-201ENST00000262580 KNSTRNQ9Y448 316 aa25.13■■□□□ 1.61
GSDMD-201ENST00000262580 CDK19Q9BWU1 502 aa25.13■■□□□ 1.61
GSDMD-201ENST00000262580 ATAD2Q6PL18 1390 aa25.12■■□□□ 1.61
GSDMD-201ENST00000262580 NPHP4O75161 1426 aaPredicted RBP25.12■■□□□ 1.61
GSDMD-201ENST00000262580 ADGRB2O60241 1585 aa25.12■■□□□ 1.61
GSDMD-201ENST00000262580 RALBP1Q15311 655 aa25.12■■□□□ 1.61
GSDMD-201ENST00000262580 CARD14Q9BXL6 1004 aa25.11■■□□□ 1.61
GSDMD-201ENST00000262580 PIK3R4Q99570 1358 aa25.11■■□□□ 1.61
GSDMD-201ENST00000262580 AMER1Q5JTC6 1135 aaPredicted RBP25.1■■□□□ 1.61
GSDMD-201ENST00000262580 CHD2O14647 1828 aaKnown RBP25.1■■□□□ 1.61
GSDMD-201ENST00000262580 NINLQ9Y2I6 1382 aa25.09■■□□□ 1.61
GSDMD-201ENST00000262580 MYBBP1AQ9BQG0 1328 aaKnown RBP25.08■■□□□ 1.61
GSDMD-201ENST00000262580 MRS2Q9HD23 443 aa25.08■■□□□ 1.61
GSDMD-201ENST00000262580 NSD3Q9BZ95 1437 aa25.08■■□□□ 1.61
GSDMD-201ENST00000262580 ANKRD36BQ8N2N9 1353 aa25.08■■□□□ 1.61
GSDMD-201ENST00000262580 NCKAP5LQ9HCH0 1330 aa25.08■■□□□ 1.6
GSDMD-201ENST00000262580 WASLO00401 505 aaPredicted RBP25.07■■□□□ 1.6
GSDMD-201ENST00000262580 USP32Q8NFA0 1604 aa25.06■■□□□ 1.6
GSDMD-201ENST00000262580 NPC1L1Q9UHC9 1359 aa25.06■■□□□ 1.6
GSDMD-201ENST00000262580 CD163L1Q9NR16 1453 aa25.04■■□□□ 1.6
GSDMD-201ENST00000262580 KCNA6P17658 529 aa25.04■■□□□ 1.6
GSDMD-201ENST00000262580 A0A1W2PP64 1363 aa25.04■■□□□ 1.6
GSDMD-201ENST00000262580 ATP7BP35670 1465 aa25■■□□□ 1.59
GSDMD-201ENST00000262580 LMTK3Q96Q04 1460 aa25■■□□□ 1.59
GSDMD-201ENST00000262580 BRD4O60885 1362 aaPredicted RBP24.99■■□□□ 1.59
GSDMD-201ENST00000262580 CENPBP07199 599 aaPredicted RBP24.99■■□□□ 1.59
GSDMD-201ENST00000262580 CABP1Q9NZU7 370 aa24.98■■□□□ 1.59
GSDMD-201ENST00000262580 TOPAZ1Q8N9V7 1692 aa24.98■■□□□ 1.59
GSDMD-201ENST00000262580 HSPA2P54652 639 aa24.98■■□□□ 1.59
GSDMD-201ENST00000262580 NLRP13Q86W25 1043 aa24.98■■□□□ 1.59
GSDMD-201ENST00000262580 PPIP5K1Q6PFW1 1433 aa24.98■■□□□ 1.59
GSDMD-201ENST00000262580 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
GSDMD-201ENST00000262580 NUDT16Q96DE0 195 aaKnown RBP24.96■■□□□ 1.59
GSDMD-201ENST00000262580 PRR36Q9H6K5 1346 aa24.96■■□□□ 1.59
GSDMD-201ENST00000262580 NALCNQ8IZF0 1738 aa24.95■■□□□ 1.58
GSDMD-201ENST00000262580 TERF2IPQ9NYB0 399 aa24.95■■□□□ 1.58
GSDMD-201ENST00000262580 FAM9BQ8IZU0 186 aa24.94■■□□□ 1.58
GSDMD-201ENST00000262580 CDC42BPGQ6DT37 1551 aa24.93■■□□□ 1.58
GSDMD-201ENST00000262580 CGNL1Q0VF96 1302 aa24.92■■□□□ 1.58
GSDMD-201ENST00000262580 ITSN1Q15811 1721 aa24.92■■□□□ 1.58
GSDMD-201ENST00000262580 PPP2R1AP30153 589 aa24.92■■□□□ 1.58
GSDMD-201ENST00000262580 HDGFL2Q7Z4V5 671 aaPredicted RBP24.92■■□□□ 1.58
GSDMD-201ENST00000262580 AKAP12Q02952 1782 aa24.91■■□□□ 1.58
GSDMD-201ENST00000262580 CCDC61Q9Y6R9 512 aa24.9■■□□□ 1.58
GSDMD-201ENST00000262580 MON2Q7Z3U7 1717 aa24.9■■□□□ 1.58
GSDMD-201ENST00000262580 KIF20BQ96Q89 1820 aa24.9■■□□□ 1.58
GSDMD-201ENST00000262580 FMN2Q9NZ56 1722 aa24.9■■□□□ 1.58
GSDMD-201ENST00000262580 CPSF1Q10570 1443 aaKnown RBP24.89■■□□□ 1.58
GSDMD-201ENST00000262580 NSD2O96028 1365 aa24.89■■□□□ 1.58
GSDMD-201ENST00000262580 ANKRD26Q9UPS8 1709 aa24.89■■□□□ 1.57
GSDMD-201ENST00000262580 NUTM2FA1L443 756 aa24.88■■□□□ 1.57
GSDMD-201ENST00000262580 PNISRQ8TF01 805 aaKnown RBP24.88■■□□□ 1.57
GSDMD-201ENST00000262580 STRCQ7RTU9 1775 aa24.88■■□□□ 1.57
GSDMD-201ENST00000262580 RGPD8O14715 1765 aaPredicted RBP24.87■■□□□ 1.57
GSDMD-201ENST00000262580 NKTRP30414 1462 aaKnown RBP24.87■■□□□ 1.57
GSDMD-201ENST00000262580 RBM33Q96EV2 1170 aaKnown RBP24.86■■□□□ 1.57
GSDMD-201ENST00000262580 MORC1Q86VD1 984 aa24.85■■□□□ 1.57
GSDMD-201ENST00000262580 STRCP1A6NGW2 1772 aa24.84■■□□□ 1.57
GSDMD-201ENST00000262580 ADGRL3Q9HAR2 1447 aa24.84■■□□□ 1.57
GSDMD-201ENST00000262580 HNRNPUQ00839 825 aaKnown RBP eCLIP24.82■■□□□ 1.56
GSDMD-201ENST00000262580 EDC4Q6P2E9 1401 aaKnown RBP24.82■■□□□ 1.56
GSDMD-201ENST00000262580 NRKQ7Z2Y5 1582 aa24.82■■□□□ 1.56
GSDMD-201ENST00000262580 ANKARQ7Z5J8 1434 aa24.81■■□□□ 1.56
GSDMD-201ENST00000262580 FYB1O15117 783 aa24.8■■□□□ 1.56
GSDMD-201ENST00000262580 GGNBP2Q9H3C7 697 aa24.8■■□□□ 1.56
GSDMD-201ENST00000262580 PLEKHG3A1L390 1219 aa24.79■■□□□ 1.56
GSDMD-201ENST00000262580 TNNT2P45379 298 aaPredicted RBP24.79■■□□□ 1.56
GSDMD-201ENST00000262580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.78■■□□□ 1.56
GSDMD-201ENST00000262580 ACEP12821 1306 aa24.78■■□□□ 1.56
GSDMD-201ENST00000262580 PROSER2Q86WR7 435 aaPredicted RBP24.75■■□□□ 1.55
GSDMD-201ENST00000262580 ZNF692Q9BU19 519 aaPredicted RBP24.75■■□□□ 1.55
GSDMD-201ENST00000262580 PMFBP1Q8TBY8 1022 aa24.74■■□□□ 1.55
GSDMD-201ENST00000262580 USP6P35125 1406 aa24.74■■□□□ 1.55
GSDMD-201ENST00000262580 C14orf37Q86TY3 774 aa24.73■■□□□ 1.55
GSDMD-201ENST00000262580 POLR3AO14802 1390 aaPredicted RBP24.72■■□□□ 1.55
GSDMD-201ENST00000262580 NME9Q86XW9 330 aa24.72■■□□□ 1.55
GSDMD-201ENST00000262580 SHPRHQ149N8 1683 aa24.7■■□□□ 1.54
GSDMD-201ENST00000262580 SSH2Q76I76 1423 aa24.69■■□□□ 1.54
GSDMD-201ENST00000262580 TTC21BQ7Z4L5 1316 aa24.68■■□□□ 1.54
GSDMD-201ENST00000262580 BLMP54132 1417 aaPredicted RBP24.68■■□□□ 1.54
GSDMD-201ENST00000262580 TMEM94Q12767 1356 aa24.68■■□□□ 1.54
GSDMD-201ENST00000262580 ZRANB1Q9UGI0 708 aa24.67■■□□□ 1.54
GSDMD-201ENST00000262580 MTHFSP49914 203 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms