RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 TSC1Q92574 1164 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 PLEKHH2Q8IVE3 1493 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 ERBINQ96RT1 1412 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 SYCP2Q9BX26 1530 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 PREX2Q70Z35 1606 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 EFCAB2Q5VUJ9 269 aa20.72■□□□□ 0.91
VSX2-201ENST00000261980 RWDD1Q9H446 243 aaPredicted RBP20.72■□□□□ 0.91
VSX2-201ENST00000261980 WWC1Q8IX03 1113 aa20.71■□□□□ 0.91
VSX2-201ENST00000261980 RARSP54136 660 aaKnown RBP20.7■□□□□ 0.9
VSX2-201ENST00000261980 FTSJ3Q8IY81 847 aaKnown RBP20.7■□□□□ 0.9
VSX2-201ENST00000261980 GBP4Q96PP9 640 aa20.7■□□□□ 0.9
VSX2-201ENST00000261980 OFD1O75665 1012 aa20.7■□□□□ 0.9
VSX2-201ENST00000261980 ASXL2Q76L83 1435 aa20.7■□□□□ 0.9
VSX2-201ENST00000261980 AAMPQ13685 434 aa20.69■□□□□ 0.9
VSX2-201ENST00000261980 CHAMP1Q96JM3 812 aa20.69■□□□□ 0.9
VSX2-201ENST00000261980 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
VSX2-201ENST00000261980 CAVIN1Q6NZI2 390 aaKnown RBP20.68■□□□□ 0.9
VSX2-201ENST00000261980 MAGI2Q86UL8 1455 aa20.68■□□□□ 0.9
VSX2-201ENST00000261980 LNPKQ9C0E8 428 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 CCDC141Q6ZP82 1450 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 TPRNQ4KMQ1 711 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 CROCC2H7BZ55 1655 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 CCDC173Q0VFZ6 552 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 AFAP1Q8N556 730 aa20.67■□□□□ 0.9
VSX2-201ENST00000261980 PLCH2O75038 1416 aa20.66■□□□□ 0.9
VSX2-201ENST00000261980 ADGRL2O95490 1459 aa20.66■□□□□ 0.9
VSX2-201ENST00000261980 WDR7Q9Y4E6 1490 aa20.66■□□□□ 0.9
VSX2-201ENST00000261980 MYO5CQ9NQX4 1742 aa20.66■□□□□ 0.9
VSX2-201ENST00000261980 FOXD4L5Q5VV16 416 aaPredicted RBP20.66■□□□□ 0.9
VSX2-201ENST00000261980 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.66■□□□□ 0.9
VSX2-201ENST00000261980 FOXD4L4Q8WXT5 416 aaPredicted RBP20.66■□□□□ 0.9
VSX2-201ENST00000261980 PRAG1Q86YV5 1406 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 ITPRIPQ8IWB1 547 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 ADGBQ8N7X0 1667 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 ARHGEF12Q9NZN5 1544 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 CCDC144AA2RUR9 1427 aa20.65■□□□□ 0.9
VSX2-201ENST00000261980 MCTP1Q6DN14 999 aa20.64■□□□□ 0.89
VSX2-201ENST00000261980 COL17A1Q9UMD9 1497 aaPredicted RBP20.64■□□□□ 0.89
VSX2-201ENST00000261980 E9PCH4 1651 aa20.63■□□□□ 0.89
VSX2-201ENST00000261980 RNF214Q8ND24 703 aa20.63■□□□□ 0.89
VSX2-201ENST00000261980 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
VSX2-201ENST00000261980 TSR2Q969E8 191 aaKnown RBP20.62■□□□□ 0.89
VSX2-201ENST00000261980 RBM27Q9P2N5 1060 aaKnown RBP20.62■□□□□ 0.89
VSX2-201ENST00000261980 SHANK2Q9UPX8 1470 aa20.61■□□□□ 0.89
VSX2-201ENST00000261980 TRAPPC8Q9Y2L5 1435 aa20.6■□□□□ 0.89
VSX2-201ENST00000261980 IGSF3O75054 1194 aa20.6■□□□□ 0.89
VSX2-201ENST00000261980 RAB3GAP1Q15042 981 aa20.6■□□□□ 0.89
VSX2-201ENST00000261980 ARHGEF5Q12774 1597 aa20.59■□□□□ 0.89
VSX2-201ENST00000261980 GAS2L2Q8NHY3 880 aa20.59■□□□□ 0.89
VSX2-201ENST00000261980 DNTTIP2Q5QJE6 756 aaKnown RBP20.59■□□□□ 0.89
VSX2-201ENST00000261980 TCP11L2Q8N4U5 519 aa20.59■□□□□ 0.89
VSX2-201ENST00000261980 RBSNQ9H1K0 784 aa20.58■□□□□ 0.89
VSX2-201ENST00000261980 RTEL1-TNFRSF6BF6WH68 1400 aa20.58■□□□□ 0.89
VSX2-201ENST00000261980 PKP1Q13835 747 aa20.58■□□□□ 0.89
VSX2-201ENST00000261980 CBX1P83916 185 aa20.57■□□□□ 0.88
VSX2-201ENST00000261980 GOLGA6L22H0YM25 854 aa20.57■□□□□ 0.88
VSX2-201ENST00000261980 PRIM1P49642 420 aaKnown RBP20.57■□□□□ 0.88
VSX2-201ENST00000261980 MVPQ14764 893 aaKnown RBP20.56■□□□□ 0.88
VSX2-201ENST00000261980 PPP1R9BQ96SB3 815 aa20.56■□□□□ 0.88
VSX2-201ENST00000261980 ISY1Q9ULR0 285 aaKnown RBP20.56■□□□□ 0.88
VSX2-201ENST00000261980 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 RAPGEF3O95398 923 aa20.55■□□□□ 0.88
VSX2-201ENST00000261980 SKOR2Q2VWA4 1001 aaPredicted RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 FOXD4L6Q3SYB3 417 aaPredicted RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 FOXD4L3Q6VB84 417 aaPredicted RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 SMC4Q9NTJ3 1288 aa20.55■□□□□ 0.88
VSX2-201ENST00000261980 SPAG9O60271 1321 aaKnown RBP20.55■□□□□ 0.88
VSX2-201ENST00000261980 DDIT3P35638 169 aa20.54■□□□□ 0.88
VSX2-201ENST00000261980 DZIP1LQ8IYY4 767 aaKnown RBP20.54■□□□□ 0.88
VSX2-201ENST00000261980 FANCAO15360 1455 aa20.54■□□□□ 0.88
VSX2-201ENST00000261980 INSRP06213 1382 aa20.54■□□□□ 0.88
VSX2-201ENST00000261980 BAG4O95429 457 aaKnown RBP20.54■□□□□ 0.88
VSX2-201ENST00000261980 SMC5Q8IY18 1101 aa20.52■□□□□ 0.88
VSX2-201ENST00000261980 C1orf115Q9H7X2 142 aa20.52■□□□□ 0.88
VSX2-201ENST00000261980 ZSCAN23Q3MJ62 389 aa20.52■□□□□ 0.88
VSX2-201ENST00000261980 TSPOAP1O95153 1857 aa20.52■□□□□ 0.88
VSX2-201ENST00000261980 PRPF40AO75400 957 aaKnown RBP20.52■□□□□ 0.87
VSX2-201ENST00000261980 PTMAP06454 111 aaKnown RBP20.52■□□□□ 0.87
VSX2-201ENST00000261980 FGD1P98174 961 aa20.52■□□□□ 0.87
VSX2-201ENST00000261980 ZNF830Q96NB3 372 aaPredicted RBP20.52■□□□□ 0.87
VSX2-201ENST00000261980 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
VSX2-201ENST00000261980 ZKSCAN2Q63HK3 967 aa20.5■□□□□ 0.87
VSX2-201ENST00000261980 C17orf53Q8N3J3 647 aaPredicted RBP20.5■□□□□ 0.87
VSX2-201ENST00000261980 CARD14Q9BXL6 1004 aa20.5■□□□□ 0.87
VSX2-201ENST00000261980 ABCC1P33527 1531 aa20.5■□□□□ 0.87
VSX2-201ENST00000261980 A2MP01023 1474 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 SCAPERQ9BY12 1400 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 K7ELQ4 463 aaPredicted RBP20.49■□□□□ 0.87
VSX2-201ENST00000261980 TRIM27P14373 513 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 MAPK8IP2Q13387 824 aaPredicted RBP20.49■□□□□ 0.87
VSX2-201ENST00000261980 SYCE3A1L190 88 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 KIF2CQ99661 725 aa20.49■□□□□ 0.87
VSX2-201ENST00000261980 NOL7Q9UMY1 257 aaKnown RBP20.49■□□□□ 0.87
VSX2-201ENST00000261980 SPDYE4A6NLX3 237 aa20.48■□□□□ 0.87
VSX2-201ENST00000261980 ANKRD45Q5TZF3 282 aa20.48■□□□□ 0.87
VSX2-201ENST00000261980 KLHL40Q2TBA0 621 aa20.48■□□□□ 0.87
VSX2-201ENST00000261980 BCL11BQ9C0K0 894 aaPredicted RBP20.48■□□□□ 0.87
VSX2-201ENST00000261980 KDM5DQ9BY66 1539 aa20.47■□□□□ 0.87
VSX2-201ENST00000261980 BBXQ8WY36 941 aaPredicted RBP20.46■□□□□ 0.87
VSX2-201ENST00000261980 ADGRL1O94910 1474 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms