RNA–Protein interactions for RNA: ENST00000261647.9

TTC19-201, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC19, Length 3,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-201ENST00000261647 NGEFQ8N5V2 710 aa23.84■■□□□ 1.41
TTC19-201ENST00000261647 PNNQ9H307 717 aaKnown RBP23.84■■□□□ 1.41
TTC19-201ENST00000261647 TRAK1Q9UPV9 953 aa23.83■■□□□ 1.41
TTC19-201ENST00000261647 NSD3Q9BZ95 1437 aa23.83■■□□□ 1.41
TTC19-201ENST00000261647 SPHKAPQ2M3C7 1700 aa23.83■■□□□ 1.41
TTC19-201ENST00000261647 EFCAB2Q5VUJ9 269 aa23.83■■□□□ 1.4
TTC19-201ENST00000261647 SPAG9O60271 1321 aaKnown RBP23.82■■□□□ 1.4
TTC19-201ENST00000261647 MVPQ14764 893 aaKnown RBP23.82■■□□□ 1.4
TTC19-201ENST00000261647 UGGT1Q9NYU2 1555 aa23.82■■□□□ 1.4
TTC19-201ENST00000261647 PHF23Q9BUL5 403 aaPredicted RBP23.81■■□□□ 1.4
TTC19-201ENST00000261647 FTSJ3Q8IY81 847 aaKnown RBP23.8■■□□□ 1.4
TTC19-201ENST00000261647 TRPM2O94759 1503 aa23.8■■□□□ 1.4
TTC19-201ENST00000261647 CHMP5Q9NZZ3 219 aa23.8■■□□□ 1.4
TTC19-201ENST00000261647 RTEL1-TNFRSF6BF6WH68 1400 aa23.79■■□□□ 1.4
TTC19-201ENST00000261647 KIF3BO15066 747 aa23.78■■□□□ 1.4
TTC19-201ENST00000261647 WDR63Q8IWG1 891 aa23.78■■□□□ 1.4
TTC19-201ENST00000261647 PTPRTO14522 1441 aa23.78■■□□□ 1.4
TTC19-201ENST00000261647 DZIP1LQ8IYY4 767 aaKnown RBP23.78■■□□□ 1.4
TTC19-201ENST00000261647 VSIG10Q8N0Z9 540 aa23.78■■□□□ 1.4
TTC19-201ENST00000261647 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
TTC19-201ENST00000261647 U2AF1L5P0DN76 240 aaPredicted RBP23.77■■□□□ 1.4
TTC19-201ENST00000261647 U2AF1Q01081 240 aaKnown RBP eCLIP23.77■■□□□ 1.4
TTC19-201ENST00000261647 ZKSCAN2Q63HK3 967 aa23.76■■□□□ 1.39
TTC19-201ENST00000261647 TMEM132EQ6IEE7 984 aa23.76■■□□□ 1.39
TTC19-201ENST00000261647 ITPRIPQ8IWB1 547 aa23.75■■□□□ 1.39
TTC19-201ENST00000261647 PKNOX2Q96KN3 472 aa23.75■■□□□ 1.39
TTC19-201ENST00000261647 SHPRHQ149N8 1683 aa23.75■■□□□ 1.39
TTC19-201ENST00000261647 ZNF692Q9BU19 519 aaPredicted RBP23.75■■□□□ 1.39
TTC19-201ENST00000261647 PLCH2O75038 1416 aa23.74■■□□□ 1.39
TTC19-201ENST00000261647 TRIM27P14373 513 aa23.74■■□□□ 1.39
TTC19-201ENST00000261647 EXOSC9Q06265 439 aaKnown RBP23.74■■□□□ 1.39
TTC19-201ENST00000261647 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
TTC19-201ENST00000261647 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
TTC19-201ENST00000261647 FOXD4L1Q9NU39 408 aa23.74■■□□□ 1.39
TTC19-201ENST00000261647 IQSEC2Q5JU85 1478 aa23.73■■□□□ 1.39
TTC19-201ENST00000261647 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
TTC19-201ENST00000261647 ERBB4Q15303 1308 aa23.73■■□□□ 1.39
TTC19-201ENST00000261647 CLCN1P35523 988 aa23.73■■□□□ 1.39
TTC19-201ENST00000261647 ERCC6L2Q5T890 1561 aa23.72■■□□□ 1.39
TTC19-201ENST00000261647 AAMPQ13685 434 aa23.71■■□□□ 1.39
TTC19-201ENST00000261647 SSH1Q8WYL5 1049 aa23.71■■□□□ 1.39
TTC19-201ENST00000261647 MYH16Q9H6N6 1097 aa23.71■■□□□ 1.39
TTC19-201ENST00000261647 GRPEL1Q9HAV7 217 aa23.71■■□□□ 1.39
TTC19-201ENST00000261647 HSP90AA1P07900 732 aaKnown RBP23.71■■□□□ 1.39
TTC19-201ENST00000261647 HSP90AA2PQ14568 343 aaPredicted RBP23.71■■□□□ 1.39
TTC19-201ENST00000261647 HSCBQ8IWL3 235 aa23.71■■□□□ 1.39
TTC19-201ENST00000261647 GAS2L3Q86XJ1 694 aa23.7■■□□□ 1.39
TTC19-201ENST00000261647 ABCA6Q8N139 1617 aa23.7■■□□□ 1.38
TTC19-201ENST00000261647 GLIPR1L2Q4G1C9 344 aa23.69■■□□□ 1.38
TTC19-201ENST00000261647 MRE11P49959 708 aa23.69■■□□□ 1.38
TTC19-201ENST00000261647 NOB1Q9ULX3 412 aaKnown RBP23.68■■□□□ 1.38
TTC19-201ENST00000261647 LNPKQ9C0E8 428 aa23.68■■□□□ 1.38
TTC19-201ENST00000261647 TMEM57Q8N5G2 664 aa23.67■■□□□ 1.38
TTC19-201ENST00000261647 NUTM2DQ5VT03 806 aaPredicted RBP23.67■■□□□ 1.38
TTC19-201ENST00000261647 TNPO1Q92973 898 aaKnown RBP23.67■■□□□ 1.38
TTC19-201ENST00000261647 U2SURPO15042 1029 aaKnown RBP23.66■■□□□ 1.38
TTC19-201ENST00000261647 CCDC27Q2M243 656 aa23.66■■□□□ 1.38
TTC19-201ENST00000261647 CFAP53Q96M91 514 aa23.66■■□□□ 1.38
TTC19-201ENST00000261647 ZMYM3Q14202 1370 aa23.66■■□□□ 1.38
TTC19-201ENST00000261647 ABCC1P33527 1531 aa23.66■■□□□ 1.38
TTC19-201ENST00000261647 ZMYND15Q9H091 742 aa23.65■■□□□ 1.38
TTC19-201ENST00000261647 ZNF518AQ6AHZ1 1483 aa23.64■■□□□ 1.38
TTC19-201ENST00000261647 CD2BP2O95400 341 aaKnown RBP23.64■■□□□ 1.38
TTC19-201ENST00000261647 MAP3K4Q9Y6R4 1608 aa23.64■■□□□ 1.37
TTC19-201ENST00000261647 HDAC1Q13547 482 aaPredicted RBP23.63■■□□□ 1.37
TTC19-201ENST00000261647 SAFB2Q14151 953 aaKnown RBP eCLIP23.63■■□□□ 1.37
TTC19-201ENST00000261647 NOS1P29475 1434 aa23.63■■□□□ 1.37
TTC19-201ENST00000261647 SLC24A1O60721 1099 aa23.62■■□□□ 1.37
TTC19-201ENST00000261647 DDIT3P35638 169 aa23.62■■□□□ 1.37
TTC19-201ENST00000261647 ATF7IPQ6VMQ6 1270 aa23.62■■□□□ 1.37
TTC19-201ENST00000261647 KANK1Q14678 1352 aa23.62■■□□□ 1.37
TTC19-201ENST00000261647 ESPNB1AK53 854 aa23.62■■□□□ 1.37
TTC19-201ENST00000261647 SMC5Q8IY18 1101 aa23.62■■□□□ 1.37
TTC19-201ENST00000261647 RBM42Q9BTD8 480 aaKnown RBP23.62■■□□□ 1.37
TTC19-201ENST00000261647 TRIM35Q9UPQ4 493 aa23.61■■□□□ 1.37
TTC19-201ENST00000261647 DDX11L8A8MPP1 907 aa23.61■■□□□ 1.37
TTC19-201ENST00000261647 DDX19BQ9UMR2 479 aa23.6■■□□□ 1.37
TTC19-201ENST00000261647 HSP90AB1P08238 724 aaKnown RBP23.59■■□□□ 1.37
TTC19-201ENST00000261647 TMPOP42166 694 aaKnown RBP23.59■■□□□ 1.37
TTC19-201ENST00000261647 CABP2Q9NPB3 220 aa23.59■■□□□ 1.37
TTC19-201ENST00000261647 ZBTB40Q9NUA8 1239 aa23.59■■□□□ 1.37
TTC19-201ENST00000261647 ZFYVE16Q7Z3T8 1539 aa23.58■■□□□ 1.37
TTC19-201ENST00000261647 KIAA1210Q9ULL0 1709 aa23.58■■□□□ 1.37
TTC19-201ENST00000261647 CD109Q6YHK3 1445 aa23.57■■□□□ 1.36
TTC19-201ENST00000261647 C1orf115Q9H7X2 142 aa23.57■■□□□ 1.36
TTC19-201ENST00000261647 KIF2CQ99661 725 aa23.57■■□□□ 1.36
TTC19-201ENST00000261647 GGNBP2Q9H3C7 697 aa23.57■■□□□ 1.36
TTC19-201ENST00000261647 TET3O43151 1660 aa23.56■■□□□ 1.36
TTC19-201ENST00000261647 RBM25P49756 843 aaKnown RBP23.56■■□□□ 1.36
TTC19-201ENST00000261647 TRIM44Q96DX7 344 aaPredicted RBP23.56■■□□□ 1.36
TTC19-201ENST00000261647 MYOM2P54296 1465 aa23.55■■□□□ 1.36
TTC19-201ENST00000261647 PLEKHF1Q96S99 279 aa23.55■■□□□ 1.36
TTC19-201ENST00000261647 NUCB1Q02818 461 aa23.55■■□□□ 1.36
TTC19-201ENST00000261647 SBNO2Q9Y2G9 1366 aa23.54■■□□□ 1.36
TTC19-201ENST00000261647 NCOA3Q9Y6Q9 1424 aa23.54■■□□□ 1.36
TTC19-201ENST00000261647 RRP9O43818 475 aaKnown RBP23.53■■□□□ 1.36
TTC19-201ENST00000261647 CHD1LQ86WJ1 897 aa23.53■■□□□ 1.36
TTC19-201ENST00000261647 MROH2AA6NES4 1674 aa23.52■■□□□ 1.36
TTC19-201ENST00000261647 RIPK4P57078 832 aa23.52■■□□□ 1.36
TTC19-201ENST00000261647 ANKRD45Q5TZF3 282 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms