RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 CCDC136Q96JN2 1154 aa20■□□□□ 0.79
DDX49-201ENST00000247003 NSD2O96028 1365 aa20■□□□□ 0.79
DDX49-201ENST00000247003 YTHDC2Q9H6S0 1430 aaKnown RBP20■□□□□ 0.79
DDX49-201ENST00000247003 CDCA7LQ96GN5 454 aa19.99■□□□□ 0.79
DDX49-201ENST00000247003 POLR3AO14802 1390 aaPredicted RBP19.99■□□□□ 0.79
DDX49-201ENST00000247003 PTPRMP28827 1452 aa19.99■□□□□ 0.79
DDX49-201ENST00000247003 MLECQ14165 292 aa19.99■□□□□ 0.79
DDX49-201ENST00000247003 STK26Q9P289 416 aa19.99■□□□□ 0.79
DDX49-201ENST00000247003 A2ML1A8K2U0 1454 aa19.97■□□□□ 0.79
DDX49-201ENST00000247003 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.79
DDX49-201ENST00000247003 POGKQ9P215 609 aa19.97■□□□□ 0.79
DDX49-201ENST00000247003 RBM19Q9Y4C8 960 aaKnown RBP19.96■□□□□ 0.79
DDX49-201ENST00000247003 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
DDX49-201ENST00000247003 SRPK2P78362 688 aaKnown RBP19.95■□□□□ 0.78
DDX49-201ENST00000247003 RIMS2Q9UQ26 1411 aa19.95■□□□□ 0.78
DDX49-201ENST00000247003 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.78
DDX49-201ENST00000247003 NGEFQ8N5V2 710 aa19.95■□□□□ 0.78
DDX49-201ENST00000247003 CABP2Q9NPB3 220 aa19.95■□□□□ 0.78
DDX49-201ENST00000247003 GOLGA2Q08379 1002 aa19.94■□□□□ 0.78
DDX49-201ENST00000247003 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
DDX49-201ENST00000247003 PRAM1Q96QH2 718 aa19.93■□□□□ 0.78
DDX49-201ENST00000247003 CFAP53Q96M91 514 aa19.92■□□□□ 0.78
DDX49-201ENST00000247003 CCDC146Q8IYE0 955 aa19.92■□□□□ 0.78
DDX49-201ENST00000247003 DLC1Q96QB1 1528 aa19.91■□□□□ 0.78
DDX49-201ENST00000247003 SHPRHQ149N8 1683 aa19.91■□□□□ 0.78
DDX49-201ENST00000247003 ZNF521Q96K83 1311 aa19.91■□□□□ 0.78
DDX49-201ENST00000247003 MINK1Q8N4C8 1332 aaPredicted RBP19.9■□□□□ 0.78
DDX49-201ENST00000247003 TNNT2P45379 298 aaPredicted RBP19.9■□□□□ 0.78
DDX49-201ENST00000247003 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.9■□□□□ 0.78
DDX49-201ENST00000247003 TERF2IPQ9NYB0 399 aa19.89■□□□□ 0.77
DDX49-201ENST00000247003 ZMYM3Q14202 1370 aa19.89■□□□□ 0.77
DDX49-201ENST00000247003 SETD1AO15047 1707 aaKnown RBP19.89■□□□□ 0.77
DDX49-201ENST00000247003 A0A1W2PP64 1363 aa19.88■□□□□ 0.77
DDX49-201ENST00000247003 ABCC11Q96J66 1382 aa19.88■□□□□ 0.77
DDX49-201ENST00000247003 APAF1O14727 1248 aa19.88■□□□□ 0.77
DDX49-201ENST00000247003 ANKRD26Q9UPS8 1709 aa19.87■□□□□ 0.77
DDX49-201ENST00000247003 HDGFP51858 240 aaKnown RBP19.86■□□□□ 0.77
DDX49-201ENST00000247003 DUSP27Q5VZP5 1158 aa19.86■□□□□ 0.77
DDX49-201ENST00000247003 EXOC6Q8TAG9 804 aa19.86■□□□□ 0.77
DDX49-201ENST00000247003 HDGFL2Q7Z4V5 671 aaPredicted RBP19.85■□□□□ 0.77
DDX49-201ENST00000247003 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.85■□□□□ 0.77
DDX49-201ENST00000247003 TNRQ92752 1358 aa19.84■□□□□ 0.77
DDX49-201ENST00000247003 SLFN5Q08AF3 891 aa19.84■□□□□ 0.77
DDX49-201ENST00000247003 E9PSI1 815 aa19.83■□□□□ 0.77
DDX49-201ENST00000247003 MTHFSP49914 203 aa19.83■□□□□ 0.76
DDX49-201ENST00000247003 NRXN3Q9Y4C0 1643 aa19.83■□□□□ 0.76
DDX49-201ENST00000247003 MED14O60244 1454 aa19.83■□□□□ 0.76
DDX49-201ENST00000247003 NKTRP30414 1462 aaKnown RBP19.83■□□□□ 0.76
DDX49-201ENST00000247003 KIF20BQ96Q89 1820 aa19.82■□□□□ 0.76
DDX49-201ENST00000247003 RUNDC1Q96C34 613 aa19.81■□□□□ 0.76
DDX49-201ENST00000247003 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
DDX49-201ENST00000247003 KNDC1Q76NI1 1749 aa19.81■□□□□ 0.76
DDX49-201ENST00000247003 UBR1Q8IWV7 1749 aa19.79■□□□□ 0.76
DDX49-201ENST00000247003 PLIN1O60240 522 aa19.79■□□□□ 0.76
DDX49-201ENST00000247003 ATP7BP35670 1465 aa19.78■□□□□ 0.76
DDX49-201ENST00000247003 IQSEC2Q5JU85 1478 aa19.78■□□□□ 0.76
DDX49-201ENST00000247003 CD163L1Q9NR16 1453 aa19.78■□□□□ 0.76
DDX49-201ENST00000247003 TRMT2AQ8IZ69 625 aaKnown RBP19.78■□□□□ 0.76
DDX49-201ENST00000247003 CRBNQ96SW2 442 aa19.76■□□□□ 0.75
DDX49-201ENST00000247003 GGNBP2Q9H3C7 697 aa19.76■□□□□ 0.75
DDX49-201ENST00000247003 FANCIQ9NVI1 1328 aa19.74■□□□□ 0.75
DDX49-201ENST00000247003 WWC1Q8IX03 1113 aa19.74■□□□□ 0.75
DDX49-201ENST00000247003 CPS1P31327 1500 aa19.74■□□□□ 0.75
DDX49-201ENST00000247003 TMEM2Q9UHN6 1383 aa19.74■□□□□ 0.75
DDX49-201ENST00000247003 WAPLQ7Z5K2 1190 aa19.74■□□□□ 0.75
DDX49-201ENST00000247003 CABP1Q9NZU7 370 aa19.74■□□□□ 0.75
DDX49-201ENST00000247003 NLRP1Q9C000 1473 aa19.74■□□□□ 0.75
DDX49-201ENST00000247003 FAM135BQ49AJ0 1406 aa19.73■□□□□ 0.75
DDX49-201ENST00000247003 U2AF1L5P0DN76 240 aaPredicted RBP19.73■□□□□ 0.75
DDX49-201ENST00000247003 U2AF1Q01081 240 aaKnown RBP eCLIP19.73■□□□□ 0.75
DDX49-201ENST00000247003 FYB1O15117 783 aa19.72■□□□□ 0.75
DDX49-201ENST00000247003 TCP11L2Q8N4U5 519 aa19.72■□□□□ 0.75
DDX49-201ENST00000247003 TECPR2O15040 1411 aa19.72■□□□□ 0.75
DDX49-201ENST00000247003 METP08581 1390 aa19.72■□□□□ 0.75
DDX49-201ENST00000247003 ADGRB2O60241 1585 aa19.72■□□□□ 0.75
DDX49-201ENST00000247003 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
DDX49-201ENST00000247003 NEUROD2Q15784 382 aa19.7■□□□□ 0.74
DDX49-201ENST00000247003 CCDC27Q2M243 656 aa19.7■□□□□ 0.74
DDX49-201ENST00000247003 SPINK5Q9NQ38 1064 aaPredicted RBP19.7■□□□□ 0.74
DDX49-201ENST00000247003 WASLO00401 505 aaPredicted RBP19.69■□□□□ 0.74
DDX49-201ENST00000247003 SIRT1Q96EB6 747 aa19.69■□□□□ 0.74
DDX49-201ENST00000247003 WDR63Q8IWG1 891 aa19.69■□□□□ 0.74
DDX49-201ENST00000247003 COL3A1P02461 1466 aaPredicted RBP19.69■□□□□ 0.74
DDX49-201ENST00000247003 PPIP5K1Q6PFW1 1433 aa19.68■□□□□ 0.74
DDX49-201ENST00000247003 RRP7AQ9Y3A4 280 aaKnown RBP19.68■□□□□ 0.74
DDX49-201ENST00000247003 U2SURPO15042 1029 aaKnown RBP19.67■□□□□ 0.74
DDX49-201ENST00000247003 FER1L4A9Z1Z3 1794 aa19.67■□□□□ 0.74
DDX49-201ENST00000247003 C20orf194Q5TEA3 1177 aa19.67■□□□□ 0.74
DDX49-201ENST00000247003 TXNDC2Q86VQ3 553 aa19.67■□□□□ 0.74
DDX49-201ENST00000247003 PNNQ9H307 717 aaKnown RBP19.67■□□□□ 0.74
DDX49-201ENST00000247003 EDC4Q6P2E9 1401 aaKnown RBP19.67■□□□□ 0.74
DDX49-201ENST00000247003 MAPK8IP3Q9UPT6 1336 aa19.66■□□□□ 0.74
DDX49-201ENST00000247003 PLEKHG1Q9ULL1 1385 aa19.66■□□□□ 0.74
DDX49-201ENST00000247003 CDC42BPGQ6DT37 1551 aa19.66■□□□□ 0.74
DDX49-201ENST00000247003 ITSN1Q15811 1721 aa19.66■□□□□ 0.74
DDX49-201ENST00000247003 C3P01024 1663 aa19.66■□□□□ 0.74
DDX49-201ENST00000247003 TCERG1O14776 1098 aaKnown RBP19.65■□□□□ 0.74
DDX49-201ENST00000247003 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
DDX49-201ENST00000247003 DMRT2Q9Y5R5 561 aa19.65■□□□□ 0.74
DDX49-201ENST00000247003 CANXP27824 592 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms