RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 C1orf115Q9H7X2 142 aa13.24□□□□□ -0.29
DDX11-201ENST00000228264 LNPKQ9C0E8 428 aa13.24□□□□□ -0.29
DDX11-201ENST00000228264 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
DDX11-201ENST00000228264 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
DDX11-201ENST00000228264 UPF2Q9HAU5 1272 aaKnown RBP13.23□□□□□ -0.29
DDX11-201ENST00000228264 GRPEL1Q9HAV7 217 aa13.23□□□□□ -0.29
DDX11-201ENST00000228264 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
DDX11-201ENST00000228264 MORC1Q86VD1 984 aa13.23□□□□□ -0.29
DDX11-201ENST00000228264 ITPRIPQ8IWB1 547 aa13.23□□□□□ -0.29
DDX11-201ENST00000228264 TRIM27P14373 513 aa13.22□□□□□ -0.29
DDX11-201ENST00000228264 TNPO1Q92973 898 aaKnown RBP13.22□□□□□ -0.29
DDX11-201ENST00000228264 MADDQ8WXG6 1647 aa13.22□□□□□ -0.29
DDX11-201ENST00000228264 EXOSC9Q06265 439 aaKnown RBP13.22□□□□□ -0.29
DDX11-201ENST00000228264 ERVK-7P63135 1459 aa13.21□□□□□ -0.29
DDX11-201ENST00000228264 CLCN1P35523 988 aa13.21□□□□□ -0.29
DDX11-201ENST00000228264 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.29
DDX11-201ENST00000228264 TRAPPC8Q9Y2L5 1435 aa13.21□□□□□ -0.3
DDX11-201ENST00000228264 U2AF1L5P0DN76 240 aaPredicted RBP13.21□□□□□ -0.3
DDX11-201ENST00000228264 U2AF1Q01081 240 aaKnown RBP eCLIP13.21□□□□□ -0.3
DDX11-201ENST00000228264 MVPQ14764 893 aaKnown RBP13.21□□□□□ -0.3
DDX11-201ENST00000228264 SCAF11Q99590 1463 aaKnown RBP13.2□□□□□ -0.3
DDX11-201ENST00000228264 FTSJ3Q8IY81 847 aaKnown RBP13.2□□□□□ -0.3
DDX11-201ENST00000228264 SSH1Q8WYL5 1049 aa13.2□□□□□ -0.3
DDX11-201ENST00000228264 RNF17Q9BXT8 1623 aaKnown RBP13.2□□□□□ -0.3
DDX11-201ENST00000228264 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
DDX11-201ENST00000228264 PMFBP1Q8TBY8 1022 aa13.2□□□□□ -0.3
DDX11-201ENST00000228264 CLASP1Q7Z460 1538 aa13.19□□□□□ -0.3
DDX11-201ENST00000228264 ABCC2Q92887 1545 aa13.19□□□□□ -0.3
DDX11-201ENST00000228264 ARHGEF5Q12774 1597 aa13.19□□□□□ -0.3
DDX11-201ENST00000228264 SMC4Q9NTJ3 1288 aa13.19□□□□□ -0.3
DDX11-201ENST00000228264 SYNMO15061 1565 aa13.19□□□□□ -0.3
DDX11-201ENST00000228264 IQGAP1P46940 1657 aa13.19□□□□□ -0.3
DDX11-201ENST00000228264 ESPNB1AK53 854 aa13.19□□□□□ -0.3
DDX11-201ENST00000228264 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
DDX11-201ENST00000228264 NOB1Q9ULX3 412 aaKnown RBP13.19□□□□□ -0.3
DDX11-201ENST00000228264 CHMP5Q9NZZ3 219 aa13.18□□□□□ -0.3
DDX11-201ENST00000228264 RUNDC1Q96C34 613 aa13.18□□□□□ -0.3
DDX11-201ENST00000228264 MYH16Q9H6N6 1097 aa13.18□□□□□ -0.3
DDX11-201ENST00000228264 AK9Q5TCS8 1911 aa13.18□□□□□ -0.3
DDX11-201ENST00000228264 KIF2CQ99661 725 aa13.18□□□□□ -0.3
DDX11-201ENST00000228264 RWDD1Q9H446 243 aaPredicted RBP13.18□□□□□ -0.3
DDX11-201ENST00000228264 UNC13BO14795 1591 aa13.18□□□□□ -0.3
DDX11-201ENST00000228264 ATP10AO60312 1499 aa13.18□□□□□ -0.3
DDX11-201ENST00000228264 U2SURPO15042 1029 aaKnown RBP13.17□□□□□ -0.3
DDX11-201ENST00000228264 PKP1Q13835 747 aa13.17□□□□□ -0.3
DDX11-201ENST00000228264 CDCA8Q53HL2 280 aa13.17□□□□□ -0.3
DDX11-201ENST00000228264 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
DDX11-201ENST00000228264 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
DDX11-201ENST00000228264 SSFA2P28290 1259 aa13.17□□□□□ -0.3
DDX11-201ENST00000228264 LAMC1P11047 1609 aa13.17□□□□□ -0.3
DDX11-201ENST00000228264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX11-201ENST00000228264 ATAD2Q6PL18 1390 aa13.17□□□□□ -0.3
DDX11-201ENST00000228264 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
DDX11-201ENST00000228264 THUMPD2Q9BTF0 503 aaKnown RBP13.16□□□□□ -0.3
DDX11-201ENST00000228264 IQGAP3Q86VI3 1631 aa13.16□□□□□ -0.3
DDX11-201ENST00000228264 CEP152O94986 1710 aa13.16□□□□□ -0.3
DDX11-201ENST00000228264 EIF2AK4Q9P2K8 1649 aaKnown RBP13.15□□□□□ -0.3
DDX11-201ENST00000228264 CLTCL1P53675 1640 aa13.15□□□□□ -0.3
DDX11-201ENST00000228264 PREX2Q70Z35 1606 aa13.15□□□□□ -0.3
DDX11-201ENST00000228264 KIF3BO15066 747 aa13.15□□□□□ -0.3
DDX11-201ENST00000228264 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
DDX11-201ENST00000228264 NUP160Q12769 1436 aa13.15□□□□□ -0.3
DDX11-201ENST00000228264 DDIT3P35638 169 aa13.15□□□□□ -0.3
DDX11-201ENST00000228264 SHPRHQ149N8 1683 aa13.14□□□□□ -0.31
DDX11-201ENST00000228264 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
DDX11-201ENST00000228264 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
DDX11-201ENST00000228264 MRE11P49959 708 aa13.14□□□□□ -0.31
DDX11-201ENST00000228264 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
DDX11-201ENST00000228264 HSCBQ8IWL3 235 aa13.14□□□□□ -0.31
DDX11-201ENST00000228264 JARID2Q92833 1246 aaPredicted RBP13.14□□□□□ -0.31
DDX11-201ENST00000228264 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
DDX11-201ENST00000228264 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
DDX11-201ENST00000228264 MPNDQ8N594 471 aa13.13□□□□□ -0.31
DDX11-201ENST00000228264 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
DDX11-201ENST00000228264 MAST1Q9Y2H9 1570 aa13.13□□□□□ -0.31
DDX11-201ENST00000228264 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
DDX11-201ENST00000228264 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
DDX11-201ENST00000228264 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
DDX11-201ENST00000228264 POLR3AO14802 1390 aaPredicted RBP13.11□□□□□ -0.31
DDX11-201ENST00000228264 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
DDX11-201ENST00000228264 HSP90AB1P08238 724 aaKnown RBP13.11□□□□□ -0.31
DDX11-201ENST00000228264 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
DDX11-201ENST00000228264 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
DDX11-201ENST00000228264 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
DDX11-201ENST00000228264 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
DDX11-201ENST00000228264 PTPRTO14522 1441 aa13.1□□□□□ -0.31
DDX11-201ENST00000228264 KDM5AP29375 1690 aaKnown RBP13.09□□□□□ -0.31
DDX11-201ENST00000228264 ATF7IPQ6VMQ6 1270 aa13.09□□□□□ -0.31
DDX11-201ENST00000228264 PAXIP1Q6ZW49 1069 aaPredicted RBP13.09□□□□□ -0.31
DDX11-201ENST00000228264 C16orf71Q8IYS4 520 aaPredicted RBP13.09□□□□□ -0.31
DDX11-201ENST00000228264 NPC1L1Q9UHC9 1359 aa13.09□□□□□ -0.31
DDX11-201ENST00000228264 SPAG9O60271 1321 aaKnown RBP13.09□□□□□ -0.31
DDX11-201ENST00000228264 DTNBO60941 627 aa13.09□□□□□ -0.31
DDX11-201ENST00000228264 RSPH4AQ5TD94 716 aa13.09□□□□□ -0.31
DDX11-201ENST00000228264 ZBTB40Q9NUA8 1239 aa13.09□□□□□ -0.31
DDX11-201ENST00000228264 APBB1O00213 710 aa13.09□□□□□ -0.31
DDX11-201ENST00000228264 NCLP19338 710 aaKnown RBP13.09□□□□□ -0.31
DDX11-201ENST00000228264 TSPYL6Q8N831 410 aa13.09□□□□□ -0.31
DDX11-201ENST00000228264 TRIM44Q96DX7 344 aaPredicted RBP13.09□□□□□ -0.31
DDX11-201ENST00000228264 TPRNQ4KMQ1 711 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms