RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 GAS2L3Q86XJ1 694 aa17.81■□□□□ 0.44
SHPK-201ENST00000225519 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
SHPK-201ENST00000225519 NASPP49321 788 aaPredicted RBP17.8■□□□□ 0.44
SHPK-201ENST00000225519 PTMSP20962 102 aa17.8■□□□□ 0.44
SHPK-201ENST00000225519 ADCY10Q96PN6 1610 aa17.8■□□□□ 0.44
SHPK-201ENST00000225519 PDCL3Q9H2J4 239 aa17.79■□□□□ 0.44
SHPK-201ENST00000225519 RBM10P98175 930 aaKnown RBP17.79■□□□□ 0.44
SHPK-201ENST00000225519 ABCC10Q5T3U5 1492 aa17.79■□□□□ 0.44
SHPK-201ENST00000225519 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
SHPK-201ENST00000225519 DDX49Q9Y6V7 483 aaKnown RBP17.79■□□□□ 0.44
SHPK-201ENST00000225519 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
SHPK-201ENST00000225519 IFT140Q96RY7 1462 aa17.78■□□□□ 0.44
SHPK-201ENST00000225519 SCAF11Q99590 1463 aaKnown RBP17.78■□□□□ 0.44
SHPK-201ENST00000225519 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
SHPK-201ENST00000225519 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
SHPK-201ENST00000225519 CCDC173Q0VFZ6 552 aa17.78■□□□□ 0.44
SHPK-201ENST00000225519 WDR63Q8IWG1 891 aa17.78■□□□□ 0.44
SHPK-201ENST00000225519 LAMC1P11047 1609 aa17.78■□□□□ 0.44
SHPK-201ENST00000225519 LNPKQ9C0E8 428 aa17.78■□□□□ 0.44
SHPK-201ENST00000225519 ATP10BO94823 1461 aa17.78■□□□□ 0.44
SHPK-201ENST00000225519 CARD14Q9BXL6 1004 aa17.77■□□□□ 0.44
SHPK-201ENST00000225519 CIZ1Q9ULV3 898 aaPredicted RBP17.77■□□□□ 0.43
SHPK-201ENST00000225519 ARID3AQ99856 593 aa17.76■□□□□ 0.43
SHPK-201ENST00000225519 FAM13BQ9NYF5 915 aa17.76■□□□□ 0.43
SHPK-201ENST00000225519 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
SHPK-201ENST00000225519 DDX19BQ9UMR2 479 aa17.76■□□□□ 0.43
SHPK-201ENST00000225519 ZSCAN30Q86W11 494 aa17.76■□□□□ 0.43
SHPK-201ENST00000225519 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
SHPK-201ENST00000225519 SYNMO15061 1565 aa17.74■□□□□ 0.43
SHPK-201ENST00000225519 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
SHPK-201ENST00000225519 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.74■□□□□ 0.43
SHPK-201ENST00000225519 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
SHPK-201ENST00000225519 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
SHPK-201ENST00000225519 R3HCC1Q9Y3T6 440 aaKnown RBP17.74■□□□□ 0.43
SHPK-201ENST00000225519 MTHFSP49914 203 aa17.73■□□□□ 0.43
SHPK-201ENST00000225519 ARHGEF5Q12774 1597 aa17.72■□□□□ 0.43
SHPK-201ENST00000225519 RAB3GAP1Q15042 981 aa17.72■□□□□ 0.43
SHPK-201ENST00000225519 SMC5Q8IY18 1101 aa17.72■□□□□ 0.43
SHPK-201ENST00000225519 POLR3AO14802 1390 aaPredicted RBP17.72■□□□□ 0.43
SHPK-201ENST00000225519 SCAPERQ9BY12 1400 aa17.72■□□□□ 0.43
SHPK-201ENST00000225519 EXOSC9Q06265 439 aaKnown RBP17.71■□□□□ 0.43
SHPK-201ENST00000225519 SNX21Q969T3 373 aa17.71■□□□□ 0.43
SHPK-201ENST00000225519 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
SHPK-201ENST00000225519 SSFA2P28290 1259 aa17.71■□□□□ 0.43
SHPK-201ENST00000225519 MYO5CQ9NQX4 1742 aa17.7■□□□□ 0.42
SHPK-201ENST00000225519 TRIM27P14373 513 aa17.7■□□□□ 0.42
SHPK-201ENST00000225519 ARHGAP5Q13017 1502 aa17.7■□□□□ 0.42
SHPK-201ENST00000225519 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
SHPK-201ENST00000225519 CALD1Q05682 793 aaKnown RBP17.7■□□□□ 0.42
SHPK-201ENST00000225519 HDAC1Q13547 482 aaPredicted RBP17.7■□□□□ 0.42
SHPK-201ENST00000225519 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
SHPK-201ENST00000225519 SYCP2Q9BX26 1530 aa17.69■□□□□ 0.42
SHPK-201ENST00000225519 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
SHPK-201ENST00000225519 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
SHPK-201ENST00000225519 ANKRD45Q5TZF3 282 aa17.68■□□□□ 0.42
SHPK-201ENST00000225519 ATF7IPQ6VMQ6 1270 aa17.68■□□□□ 0.42
SHPK-201ENST00000225519 OFD1O75665 1012 aa17.68■□□□□ 0.42
SHPK-201ENST00000225519 STAC3Q96MF2 364 aa17.68■□□□□ 0.42
SHPK-201ENST00000225519 NOB1Q9ULX3 412 aaKnown RBP17.68■□□□□ 0.42
SHPK-201ENST00000225519 SSH1Q8WYL5 1049 aa17.68■□□□□ 0.42
SHPK-201ENST00000225519 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
SHPK-201ENST00000225519 TMEM57Q8N5G2 664 aa17.67■□□□□ 0.42
SHPK-201ENST00000225519 MCTP1Q6DN14 999 aa17.67■□□□□ 0.42
SHPK-201ENST00000225519 CAVIN1Q6NZI2 390 aaKnown RBP17.67■□□□□ 0.42
SHPK-201ENST00000225519 RTEL1-TNFRSF6BF6WH68 1400 aa17.67■□□□□ 0.42
SHPK-201ENST00000225519 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
SHPK-201ENST00000225519 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
SHPK-201ENST00000225519 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
SHPK-201ENST00000225519 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
SHPK-201ENST00000225519 SAMD9LQ8IVG5 1584 aa17.65■□□□□ 0.42
SHPK-201ENST00000225519 CHD1LQ86WJ1 897 aa17.65■□□□□ 0.42
SHPK-201ENST00000225519 TRAK1Q9UPV9 953 aa17.65■□□□□ 0.42
SHPK-201ENST00000225519 PPP1R9BQ96SB3 815 aa17.64■□□□□ 0.41
SHPK-201ENST00000225519 KLHL40Q2TBA0 621 aa17.64■□□□□ 0.41
SHPK-201ENST00000225519 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
SHPK-201ENST00000225519 DDIT3P35638 169 aa17.63■□□□□ 0.41
SHPK-201ENST00000225519 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
SHPK-201ENST00000225519 CD2BP2O95400 341 aaKnown RBP17.63■□□□□ 0.41
SHPK-201ENST00000225519 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
SHPK-201ENST00000225519 GAS2L2Q8NHY3 880 aa17.63■□□□□ 0.41
SHPK-201ENST00000225519 MAP7D2Q96T17 732 aa17.63■□□□□ 0.41
SHPK-201ENST00000225519 ZBTB7CA1YPR0 619 aa17.62■□□□□ 0.41
SHPK-201ENST00000225519 NUCB1Q02818 461 aa17.62■□□□□ 0.41
SHPK-201ENST00000225519 ABCA8O94911 1581 aa17.62■□□□□ 0.41
SHPK-201ENST00000225519 UQCRHLA0A096LP55 91 aa17.62■□□□□ 0.41
SHPK-201ENST00000225519 UQCRHP07919 91 aa17.62■□□□□ 0.41
SHPK-201ENST00000225519 CT47B1P0C2W7 299 aaPredicted RBP17.62■□□□□ 0.41
SHPK-201ENST00000225519 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
SHPK-201ENST00000225519 KDM5AP29375 1690 aaKnown RBP17.61■□□□□ 0.41
SHPK-201ENST00000225519 UNC13BO14795 1591 aa17.61■□□□□ 0.41
SHPK-201ENST00000225519 RNF17Q9BXT8 1623 aaKnown RBP17.61■□□□□ 0.41
SHPK-201ENST00000225519 PTMAP06454 111 aaKnown RBP17.61■□□□□ 0.41
SHPK-201ENST00000225519 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
SHPK-201ENST00000225519 ATP10AO60312 1499 aa17.6■□□□□ 0.41
SHPK-201ENST00000225519 BMP2KLQ5H9B9 411 aa17.6■□□□□ 0.41
SHPK-201ENST00000225519 NCOA3Q9Y6Q9 1424 aa17.6■□□□□ 0.41
SHPK-201ENST00000225519 ADGRF5Q8IZF2 1346 aa17.59■□□□□ 0.41
SHPK-201ENST00000225519 C1orf115Q9H7X2 142 aa17.59■□□□□ 0.41
SHPK-201ENST00000225519 IQGAP3Q86VI3 1631 aa17.59■□□□□ 0.41
SHPK-201ENST00000225519 RIPK4P57078 832 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms