RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 MINK1Q8N4C8 1332 aaPredicted RBP22.87■■□□□ 1.25
CHGA-201ENST00000216492 TMC1Q8TDI8 760 aa22.86■■□□□ 1.25
CHGA-201ENST00000216492 SLC26A8Q96RN1 970 aa22.86■■□□□ 1.25
CHGA-201ENST00000216492 CC2D1BQ5T0F9 858 aaKnown RBP22.86■■□□□ 1.25
CHGA-201ENST00000216492 ADAMTS13Q76LX8 1427 aa22.85■■□□□ 1.25
CHGA-201ENST00000216492 CABP2Q9NPB3 220 aa22.85■■□□□ 1.25
CHGA-201ENST00000216492 SLC12A5Q9H2X9 1139 aa22.85■■□□□ 1.25
CHGA-201ENST00000216492 SIRT1Q96EB6 747 aa22.84■■□□□ 1.25
CHGA-201ENST00000216492 SRPK2P78362 688 aaKnown RBP22.83■■□□□ 1.25
CHGA-201ENST00000216492 TBX22Q9Y458 520 aa22.83■■□□□ 1.24
CHGA-201ENST00000216492 SETD1AO15047 1707 aaKnown RBP22.83■■□□□ 1.24
CHGA-201ENST00000216492 CEP170BQ9Y4F5 1589 aaPredicted RBP22.82■■□□□ 1.24
CHGA-201ENST00000216492 DLC1Q96QB1 1528 aa22.82■■□□□ 1.24
CHGA-201ENST00000216492 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
CHGA-201ENST00000216492 AMER1Q5JTC6 1135 aaPredicted RBP22.81■■□□□ 1.24
CHGA-201ENST00000216492 CARD14Q9BXL6 1004 aa22.81■■□□□ 1.24
CHGA-201ENST00000216492 ANKLE2Q86XL3 938 aa22.8■■□□□ 1.24
CHGA-201ENST00000216492 PARD3Q8TEW0 1356 aa22.8■■□□□ 1.24
CHGA-201ENST00000216492 PLEKHH1Q9ULM0 1364 aa22.8■■□□□ 1.24
CHGA-201ENST00000216492 CDK19Q9BWU1 502 aa22.8■■□□□ 1.24
CHGA-201ENST00000216492 TULP4Q9NRJ4 1543 aa22.79■■□□□ 1.24
CHGA-201ENST00000216492 MED14O60244 1454 aa22.79■■□□□ 1.24
CHGA-201ENST00000216492 SETD1BQ9UPS6 1966 aaKnown RBP22.79■■□□□ 1.24
CHGA-201ENST00000216492 MYOM1P52179 1685 aa22.77■■□□□ 1.24
CHGA-201ENST00000216492 TECPR2O15040 1411 aa22.77■■□□□ 1.24
CHGA-201ENST00000216492 FAM135BQ49AJ0 1406 aa22.77■■□□□ 1.24
CHGA-201ENST00000216492 NLRP13Q86W25 1043 aa22.75■■□□□ 1.23
CHGA-201ENST00000216492 AMOTL2Q9Y2J4 779 aa22.75■■□□□ 1.23
CHGA-201ENST00000216492 ATAD2Q6PL18 1390 aa22.74■■□□□ 1.23
CHGA-201ENST00000216492 NPC1L1Q9UHC9 1359 aa22.73■■□□□ 1.23
CHGA-201ENST00000216492 IRX6P78412 446 aaPredicted RBP22.73■■□□□ 1.23
CHGA-201ENST00000216492 ROBO2Q9HCK4 1378 aa22.73■■□□□ 1.23
CHGA-201ENST00000216492 BRD4O60885 1362 aaPredicted RBP22.72■■□□□ 1.23
CHGA-201ENST00000216492 WASLO00401 505 aaPredicted RBP22.72■■□□□ 1.23
CHGA-201ENST00000216492 PTPRUQ92729 1446 aa22.71■■□□□ 1.23
CHGA-201ENST00000216492 NINLQ9Y2I6 1382 aa22.71■■□□□ 1.23
CHGA-201ENST00000216492 PPP4R2Q9NY27 417 aa22.71■■□□□ 1.23
CHGA-201ENST00000216492 SMG6Q86US8 1419 aaKnown RBP22.7■■□□□ 1.22
CHGA-201ENST00000216492 PNISRQ8TF01 805 aaKnown RBP22.7■■□□□ 1.22
CHGA-201ENST00000216492 ANKRD36BQ8N2N9 1353 aa22.69■■□□□ 1.22
CHGA-201ENST00000216492 CABP1Q9NZU7 370 aa22.68■■□□□ 1.22
CHGA-201ENST00000216492 CPS1P31327 1500 aa22.68■■□□□ 1.22
CHGA-201ENST00000216492 ZNF142P52746 1687 aaPredicted RBP22.68■■□□□ 1.22
CHGA-201ENST00000216492 NSD3Q9BZ95 1437 aa22.67■■□□□ 1.22
CHGA-201ENST00000216492 TERF2IPQ9NYB0 399 aa22.67■■□□□ 1.22
CHGA-201ENST00000216492 KNDC1Q76NI1 1749 aa22.65■■□□□ 1.22
CHGA-201ENST00000216492 PPP2R1AP30153 589 aa22.65■■□□□ 1.22
CHGA-201ENST00000216492 DIP2AQ14689 1571 aa22.65■■□□□ 1.22
CHGA-201ENST00000216492 RBM19Q9Y4C8 960 aaKnown RBP22.64■■□□□ 1.22
CHGA-201ENST00000216492 PIK3R4Q99570 1358 aa22.64■■□□□ 1.22
CHGA-201ENST00000216492 CGNL1Q0VF96 1302 aa22.64■■□□□ 1.21
CHGA-201ENST00000216492 HDGFL2Q7Z4V5 671 aaPredicted RBP22.63■■□□□ 1.21
CHGA-201ENST00000216492 NUDCQ9Y266 331 aa22.63■■□□□ 1.21
CHGA-201ENST00000216492 KCNA6P17658 529 aa22.62■■□□□ 1.21
CHGA-201ENST00000216492 NUDT16Q96DE0 195 aaKnown RBP22.62■■□□□ 1.21
CHGA-201ENST00000216492 A0A1W2PP64 1363 aa22.62■■□□□ 1.21
CHGA-201ENST00000216492 CCDC61Q9Y6R9 512 aa22.61■■□□□ 1.21
CHGA-201ENST00000216492 KDM4FA0A1W2PPD8 638 aa22.61■■□□□ 1.21
CHGA-201ENST00000216492 NCKAP5LQ9HCH0 1330 aa22.6■■□□□ 1.21
CHGA-201ENST00000216492 MORC1Q86VD1 984 aa22.6■■□□□ 1.21
CHGA-201ENST00000216492 PTCH1Q13635 1447 aa22.6■■□□□ 1.21
CHGA-201ENST00000216492 NPHP4O75161 1426 aaPredicted RBP22.58■■□□□ 1.21
CHGA-201ENST00000216492 CD163L1Q9NR16 1453 aa22.57■■□□□ 1.2
CHGA-201ENST00000216492 PPIP5K1Q6PFW1 1433 aa22.55■■□□□ 1.2
CHGA-201ENST00000216492 PRR36Q9H6K5 1346 aa22.54■■□□□ 1.2
CHGA-201ENST00000216492 NUTM2FA1L443 756 aa22.54■■□□□ 1.2
CHGA-201ENST00000216492 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.54■■□□□ 1.2
CHGA-201ENST00000216492 NSD2O96028 1365 aa22.53■■□□□ 1.2
CHGA-201ENST00000216492 FYB1O15117 783 aa22.53■■□□□ 1.2
CHGA-201ENST00000216492 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
CHGA-201ENST00000216492 RNF123Q5XPI4 1314 aa22.52■■□□□ 1.19
CHGA-201ENST00000216492 GGNBP2Q9H3C7 697 aa22.51■■□□□ 1.19
CHGA-201ENST00000216492 ATP7BP35670 1465 aa22.51■■□□□ 1.19
CHGA-201ENST00000216492 ZNF692Q9BU19 519 aaPredicted RBP22.5■■□□□ 1.19
CHGA-201ENST00000216492 ADGRB2O60241 1585 aa22.49■■□□□ 1.19
CHGA-201ENST00000216492 CPSF1Q10570 1443 aaKnown RBP22.49■■□□□ 1.19
CHGA-201ENST00000216492 USP32Q8NFA0 1604 aa22.49■■□□□ 1.19
CHGA-201ENST00000216492 XRN1Q8IZH2 1706 aaKnown RBP22.49■■□□□ 1.19
CHGA-201ENST00000216492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.49■■□□□ 1.19
CHGA-201ENST00000216492 HSPA2P54652 639 aa22.48■■□□□ 1.19
CHGA-201ENST00000216492 PLEKHG3A1L390 1219 aa22.47■■□□□ 1.19
CHGA-201ENST00000216492 B4GALNT3Q6L9W6 998 aa22.47■■□□□ 1.19
CHGA-201ENST00000216492 ANP32EQ9BTT0 268 aa22.47■■□□□ 1.19
CHGA-201ENST00000216492 WDR43Q15061 677 aaKnown RBP eCLIP22.46■■□□□ 1.19
CHGA-201ENST00000216492 RBM33Q96EV2 1170 aaKnown RBP22.46■■□□□ 1.19
CHGA-201ENST00000216492 ADAMTS8Q9UP79 889 aa22.46■■□□□ 1.19
CHGA-201ENST00000216492 INSRP06213 1382 aa22.45■■□□□ 1.19
CHGA-201ENST00000216492 MTHFSP49914 203 aa22.45■■□□□ 1.18
CHGA-201ENST00000216492 ACEP12821 1306 aa22.44■■□□□ 1.18
CHGA-201ENST00000216492 CHD2O14647 1828 aaKnown RBP22.43■■□□□ 1.18
CHGA-201ENST00000216492 EDC4Q6P2E9 1401 aaKnown RBP22.43■■□□□ 1.18
CHGA-201ENST00000216492 SENP3-EIF4A1A0A087X0R7 540 aa22.42■■□□□ 1.18
CHGA-201ENST00000216492 PDE3BQ13370 1112 aa22.42■■□□□ 1.18
CHGA-201ENST00000216492 POLR3AO14802 1390 aaPredicted RBP22.41■■□□□ 1.18
CHGA-201ENST00000216492 PMFBP1Q8TBY8 1022 aa22.41■■□□□ 1.18
CHGA-201ENST00000216492 FANCIQ9NVI1 1328 aa22.4■■□□□ 1.18
CHGA-201ENST00000216492 CDC42BPGQ6DT37 1551 aa22.39■■□□□ 1.18
CHGA-201ENST00000216492 C14orf37Q86TY3 774 aa22.38■■□□□ 1.17
CHGA-201ENST00000216492 NME9Q86XW9 330 aa22.38■■□□□ 1.17
CHGA-201ENST00000216492 CFAP53Q96M91 514 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms