RNA–Protein interactions for RNA: ENSMUST00000223160.1

Trim9-211, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim9, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-211ENSMUST00000223160 Trim30dE9PWL0 497 aa13.09□□□□□ -0.31
Trim9-211ENSMUST00000223160 Prkrip1Q9CWV6 186 aaKnown RBP13.09□□□□□ -0.31
Trim9-211ENSMUST00000223160 CenpjQ569L8 1344 aa13.08□□□□□ -0.32
Trim9-211ENSMUST00000223160 Nutm1Q8BHP2 1126 aa13.08□□□□□ -0.32
Trim9-211ENSMUST00000223160 Prex1Q69ZK0 1650 aa13.08□□□□□ -0.32
Trim9-211ENSMUST00000223160 Gm6268A2A3U9 297 aa13.08□□□□□ -0.32
Trim9-211ENSMUST00000223160 MyclP10166 368 aa13.08□□□□□ -0.32
Trim9-211ENSMUST00000223160 Cdk19Q8BWD8 501 aa13.08□□□□□ -0.32
Trim9-211ENSMUST00000223160 Sbno1Q689Z5 1390 aa13.07□□□□□ -0.32
Trim9-211ENSMUST00000223160 Cald1E9QA15 768 aaKnown RBP13.07□□□□□ -0.32
Trim9-211ENSMUST00000223160 Sox12Q04890 314 aa13.07□□□□□ -0.32
Trim9-211ENSMUST00000223160 Usp19Q3UJD6 1360 aa13.07□□□□□ -0.32
Trim9-211ENSMUST00000223160 1700019A02RikA0A087WPV9 146 aa13.07□□□□□ -0.32
Trim9-211ENSMUST00000223160 Kiaa1210E9Q0C6 1637 aa13.07□□□□□ -0.32
Trim9-211ENSMUST00000223160 Psme1P97371 249 aa13.06□□□□□ -0.32
Trim9-211ENSMUST00000223160 Nectin2P32507 530 aa13.06□□□□□ -0.32
Trim9-211ENSMUST00000223160 Stard8Q8K031 1019 aa13.06□□□□□ -0.32
Trim9-211ENSMUST00000223160 Tubgcp6G5E8P0 1769 aa13.05□□□□□ -0.32
Trim9-211ENSMUST00000223160 Neurl4Q5NCX5 1563 aa13.05□□□□□ -0.32
Trim9-211ENSMUST00000223160 Uspl1Q3ULM6 1089 aa13.05□□□□□ -0.32
Trim9-211ENSMUST00000223160 Abca17E9PX95 1733 aa13.05□□□□□ -0.32
Trim9-211ENSMUST00000223160 Setd1aE9PYH6 1716 aa13.04□□□□□ -0.32
Trim9-211ENSMUST00000223160 Iqgap3F8VQ29 1632 aa13.04□□□□□ -0.32
Trim9-211ENSMUST00000223160 Fndc1E9Q043 1732 aa13.04□□□□□ -0.32
Trim9-211ENSMUST00000223160 CanxP35564 591 aaKnown RBP13.04□□□□□ -0.32
Trim9-211ENSMUST00000223160 Nphp4P59240 1425 aa13.04□□□□□ -0.32
Trim9-211ENSMUST00000223160 Prrc2bQ7TPM1 1486 aaKnown RBP13.04□□□□□ -0.32
Trim9-211ENSMUST00000223160 Mcm10Q0VBD2 885 aa13.04□□□□□ -0.32
Trim9-211ENSMUST00000223160 Dusp27Q148W8 1138 aa13.04□□□□□ -0.32
Trim9-211ENSMUST00000223160 Lrrc7Q80TE7 1490 aa13.03□□□□□ -0.32
Trim9-211ENSMUST00000223160 Arid4bA2CG63 1314 aaKnown RBP13.03□□□□□ -0.32
Trim9-211ENSMUST00000223160 Plekhh1Q80TI1 1356 aa13.03□□□□□ -0.32
Trim9-211ENSMUST00000223160 4933416C03RikQ3V063 378 aa13.03□□□□□ -0.32
Trim9-211ENSMUST00000223160 Gsto1O09131 240 aa13.03□□□□□ -0.32
Trim9-211ENSMUST00000223160 Tmco5bQ80X59 307 aa13.03□□□□□ -0.32
Trim9-211ENSMUST00000223160 Uggt2E9Q4X2 1504 aa13.03□□□□□ -0.32
Trim9-211ENSMUST00000223160 Pibf1E9Q6K3 756 aa13.02□□□□□ -0.32
Trim9-211ENSMUST00000223160 DaxxO35613 739 aa13.02□□□□□ -0.32
Trim9-211ENSMUST00000223160 Dip2cE9PWR4 1557 aa13.02□□□□□ -0.33
Trim9-211ENSMUST00000223160 Mapk8ip3Q9ESN9 1337 aa13.01□□□□□ -0.33
Trim9-211ENSMUST00000223160 Skint5A7XUY5 1461 aa13□□□□□ -0.33
Trim9-211ENSMUST00000223160 NinlQ6ZQ12 1394 aa13□□□□□ -0.33
Trim9-211ENSMUST00000223160 U2surpQ6NV83 1029 aaKnown RBP12.99□□□□□ -0.33
Trim9-211ENSMUST00000223160 Slc12a5Q91V14 1138 aa12.99□□□□□ -0.33
Trim9-211ENSMUST00000223160 Rims1Q99NE5 1463 aa12.99□□□□□ -0.33
Trim9-211ENSMUST00000223160 Ipo9Q91YE6 1041 aa12.99□□□□□ -0.33
Trim9-211ENSMUST00000223160 HnrnpmQ9D0E1 729 aaKnown RBP12.99□□□□□ -0.33
Trim9-211ENSMUST00000223160 MlecQ6ZQI3 291 aaKnown RBP12.99□□□□□ -0.33
Trim9-211ENSMUST00000223160 PalldQ9ET54 1408 aa12.98□□□□□ -0.33
Trim9-211ENSMUST00000223160 Ralbp1Q62172 648 aa12.98□□□□□ -0.33
Trim9-211ENSMUST00000223160 PalmQ9Z0P4 383 aa12.98□□□□□ -0.33
Trim9-211ENSMUST00000223160 IbtkQ6ZPR6 1352 aaKnown RBP12.98□□□□□ -0.33
Trim9-211ENSMUST00000223160 Adgrb3Q80ZF8 1522 aa12.98□□□□□ -0.33
Trim9-211ENSMUST00000223160 Pnmal2G3X9N3 661 aa12.97□□□□□ -0.33
Trim9-211ENSMUST00000223160 Ccdc60Q8C4J0 545 aa12.97□□□□□ -0.33
Trim9-211ENSMUST00000223160 Slc52a2Q9D8F3 450 aa12.97□□□□□ -0.33
Trim9-211ENSMUST00000223160 Kdm5aQ3UXZ9 1690 aa12.97□□□□□ -0.33
Trim9-211ENSMUST00000223160 Pola1P33609 1465 aa12.97□□□□□ -0.33
Trim9-211ENSMUST00000223160 Rlbp1Q9Z275 317 aa12.97□□□□□ -0.33
Trim9-211ENSMUST00000223160 Cep170bQ80U49 1574 aa12.97□□□□□ -0.33
Trim9-211ENSMUST00000223160 EspnQ9ET47 871 aa12.97□□□□□ -0.33
Trim9-211ENSMUST00000223160 Cdk5rap2Q8K389 1822 aa12.96□□□□□ -0.33
Trim9-211ENSMUST00000223160 Efcab6Q6P1E8 1516 aa12.96□□□□□ -0.33
Trim9-211ENSMUST00000223160 Scaf11E9PZM7 1456 aaKnown RBP12.96□□□□□ -0.33
Trim9-211ENSMUST00000223160 Atf7ipQ7TT18 1306 aa12.96□□□□□ -0.34
Trim9-211ENSMUST00000223160 Eif2s2Q99L45 331 aaKnown RBP12.95□□□□□ -0.34
Trim9-211ENSMUST00000223160 Bcl11aQ9QYE3 773 aa12.95□□□□□ -0.34
Trim9-211ENSMUST00000223160 IghaA0A0A6YXW6 389 aa12.95□□□□□ -0.34
Trim9-211ENSMUST00000223160 KarsQ99MN1 595 aaKnown RBP12.95□□□□□ -0.34
Trim9-211ENSMUST00000223160 Aplp1Q03157 653 aa12.94□□□□□ -0.34
Trim9-211ENSMUST00000223160 Abca8aQ8K442 1620 aa12.94□□□□□ -0.34
Trim9-211ENSMUST00000223160 Duxf3A0A0N4SV92 674 aa12.94□□□□□ -0.34
Trim9-211ENSMUST00000223160 Klhdc4Q921I2 584 aa12.94□□□□□ -0.34
Trim9-211ENSMUST00000223160 Sart3Q9JLI8 962 aaKnown RBP12.93□□□□□ -0.34
Trim9-211ENSMUST00000223160 Atp10aO54827 1508 aa12.93□□□□□ -0.34
Trim9-211ENSMUST00000223160 Tmem131lQ3U3D7 1597 aa12.93□□□□□ -0.34
Trim9-211ENSMUST00000223160 RereQ80TZ9 1558 aa12.93□□□□□ -0.34
Trim9-211ENSMUST00000223160 Knl1Q66JQ7 1612 aa12.93□□□□□ -0.34
Trim9-211ENSMUST00000223160 Ak7Q9D2H2 614 aa12.92□□□□□ -0.34
Trim9-211ENSMUST00000223160 Cabp2Q9JLK4 216 aa12.92□□□□□ -0.34
Trim9-211ENSMUST00000223160 Kdm2bQ6P1G2 1309 aa12.92□□□□□ -0.34
Trim9-211ENSMUST00000223160 Itsn2Q9Z0R6 1659 aa12.92□□□□□ -0.34
Trim9-211ENSMUST00000223160 Cep152A2AUM9 1736 aaKnown RBP12.92□□□□□ -0.34
Trim9-211ENSMUST00000223160 Hsp90ab1P11499 724 aaKnown RBP12.92□□□□□ -0.34
Trim9-211ENSMUST00000223160 MpripP97434 1024 aa12.92□□□□□ -0.34
Trim9-211ENSMUST00000223160 Rtl5Q5DTT4 599 aa12.92□□□□□ -0.34
Trim9-211ENSMUST00000223160 Rbm25B2RY56 838 aaKnown RBP12.91□□□□□ -0.34
Trim9-211ENSMUST00000223160 InsrP15208 1372 aa12.91□□□□□ -0.34
Trim9-211ENSMUST00000223160 Hfm1D3Z4R1 1434 aa12.91□□□□□ -0.34
Trim9-211ENSMUST00000223160 Trim58Q5NCC9 485 aa12.91□□□□□ -0.34
Trim9-211ENSMUST00000223160 Ehbp1l1Q99MS7 1716 aa12.9□□□□□ -0.34
Trim9-211ENSMUST00000223160 Talpid3E9PV87 1520 aa12.9□□□□□ -0.34
Trim9-211ENSMUST00000223160 Map4k4P97820 1233 aaKnown RBP12.9□□□□□ -0.34
Trim9-211ENSMUST00000223160 Ccar1Q8CH18 1146 aaKnown RBP12.9□□□□□ -0.34
Trim9-211ENSMUST00000223160 Clasp1Q80TV8 1535 aaKnown RBP12.9□□□□□ -0.34
Trim9-211ENSMUST00000223160 Smc5Q8CG46 1101 aaKnown RBP12.89□□□□□ -0.35
Trim9-211ENSMUST00000223160 Ercc6l2Q9JIM3 1537 aa12.89□□□□□ -0.35
Trim9-211ENSMUST00000223160 NudcO35685 332 aaKnown RBP12.89□□□□□ -0.35
Trim9-211ENSMUST00000223160 Topbp1Q6ZQF0 1515 aa12.89□□□□□ -0.35
Trim9-211ENSMUST00000223160 Mbd3Q9Z2D8 285 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms