RNA–Protein interactions for RNA: ENSMUST00000223160.1

Trim9-211, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim9, Length 3,574 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-211ENSMUST00000223160 NischQ80TM9 1593 aa19.21■□□□□ 0.67
Trim9-211ENSMUST00000223160 Rhox8Q6VSS7 320 aa18.61■□□□□ 0.57
Trim9-211ENSMUST00000223160 Abcc9P70170 1546 aa18.46■□□□□ 0.55
Trim9-211ENSMUST00000223160 Gm35339A0A140LHH9 1649 aa18.35■□□□□ 0.53
Trim9-211ENSMUST00000223160 Abcc8B2RUS7 1588 aa18.15■□□□□ 0.5
Trim9-211ENSMUST00000223160 Ccdc136Q3TVA9 1136 aa17.31■□□□□ 0.36
Trim9-211ENSMUST00000223160 Ehmt2Q9Z148 1263 aaKnown RBP17.04■□□□□ 0.32
Trim9-211ENSMUST00000223160 ScribQ80U72 1612 aa16.98■□□□□ 0.31
Trim9-211ENSMUST00000223160 Rtl1Q7M732 1744 aa16.97■□□□□ 0.31
Trim9-211ENSMUST00000223160 Ccdc180J3QNE4 1664 aa16.91■□□□□ 0.3
Trim9-211ENSMUST00000223160 Rb1cc1Q9ESK9 1588 aa16.84■□□□□ 0.29
Trim9-211ENSMUST00000223160 Zcchc6Q5BLK4 1491 aaKnown RBP16.75■□□□□ 0.27
Trim9-211ENSMUST00000223160 Kdm5dQ62240 1548 aa16.73■□□□□ 0.27
Trim9-211ENSMUST00000223160 Trim41Q5NCC3 630 aa16.6■□□□□ 0.25
Trim9-211ENSMUST00000223160 Dcaf1Q80TR8 1506 aa16.55■□□□□ 0.24
Trim9-211ENSMUST00000223160 Baz1aO88379 1555 aa16.51■□□□□ 0.23
Trim9-211ENSMUST00000223160 Cngb1E1AZ71 1325 aa16.49■□□□□ 0.23
Trim9-211ENSMUST00000223160 NacadQ5SWP3 1504 aa16.48■□□□□ 0.23
Trim9-211ENSMUST00000223160 Gab3Q8BSM5 595 aa16.43■□□□□ 0.22
Trim9-211ENSMUST00000223160 HrcG5E8J6 738 aa16.38■□□□□ 0.21
Trim9-211ENSMUST00000223160 Esf1Q3V1V3 845 aaKnown RBP16.24■□□□□ 0.19
Trim9-211ENSMUST00000223160 Chic1Q8CBW7 227 aa16.23■□□□□ 0.19
Trim9-211ENSMUST00000223160 Sycp2Q9CUU3 1500 aa16.14■□□□□ 0.17
Trim9-211ENSMUST00000223160 Acin1Q9JIX8 1338 aaKnown RBP16.14■□□□□ 0.17
Trim9-211ENSMUST00000223160 Cecr2E9Q2Z1 1453 aa16.11■□□□□ 0.17
Trim9-211ENSMUST00000223160 Smarca2Q6DIC0 1577 aa16.09■□□□□ 0.17
Trim9-211ENSMUST00000223160 Rpgrip1Q9EPQ2 1331 aa15.99■□□□□ 0.15
Trim9-211ENSMUST00000223160 Rsf1E9PWW9 1441 aaKnown RBP15.97■□□□□ 0.15
Trim9-211ENSMUST00000223160 Ccdc88bQ4QRL3 1481 aa15.9■□□□□ 0.14
Trim9-211ENSMUST00000223160 Cep164Q5DU05 1446 aa15.9■□□□□ 0.14
Trim9-211ENSMUST00000223160 Crybg2B7ZCC2 1516 aa15.9■□□□□ 0.14
Trim9-211ENSMUST00000223160 Brd4Q9ESU6 1400 aaKnown RBP15.88■□□□□ 0.13
Trim9-211ENSMUST00000223160 BicraF8VPZ9 1578 aa15.85■□□□□ 0.13
Trim9-211ENSMUST00000223160 Myt1lP97500 1187 aa15.83■□□□□ 0.12
Trim9-211ENSMUST00000223160 Synj1Q8CHC4 1574 aa15.81■□□□□ 0.12
Trim9-211ENSMUST00000223160 Golga3P55937 1487 aa15.74■□□□□ 0.11
Trim9-211ENSMUST00000223160 Zeb1Q64318 1117 aa15.72■□□□□ 0.11
Trim9-211ENSMUST00000223160 CftrP26361 1476 aa15.69■□□□□ 0.1
Trim9-211ENSMUST00000223160 UbtfP25976 765 aaKnown RBP15.67■□□□□ 0.1
Trim9-211ENSMUST00000223160 Il27Q8K3I6 234 aa15.66■□□□□ 0.1
Trim9-211ENSMUST00000223160 Npm2Q80W85 207 aa15.65■□□□□ 0.1
Trim9-211ENSMUST00000223160 Pcgf6Q99NA9 353 aa15.63■□□□□ 0.09
Trim9-211ENSMUST00000223160 Mier1Q5UAK0 511 aa15.59■□□□□ 0.09
Trim9-211ENSMUST00000223160 Supt5hO55201 1082 aaKnown RBP15.57■□□□□ 0.08
Trim9-211ENSMUST00000223160 Ppargc1bQ8VHJ7 1014 aa15.46■□□□□ 0.06
Trim9-211ENSMUST00000223160 Ap3b1Q9Z1T1 1105 aa15.46■□□□□ 0.06
Trim9-211ENSMUST00000223160 Cc2d2aQ8CFW7 1633 aa15.45■□□□□ 0.06
Trim9-211ENSMUST00000223160 Smarca4Q3TKT4 1613 aaKnown RBP15.44■□□□□ 0.06
Trim9-211ENSMUST00000223160 Plekhg3Q4VAC9 1341 aa15.43■□□□□ 0.06
Trim9-211ENSMUST00000223160 Cttnbp2B9EJA2 1648 aa15.4■□□□□ 0.06
Trim9-211ENSMUST00000223160 Top2bQ64511 1612 aa15.32■□□□□ 0.04
Trim9-211ENSMUST00000223160 Iqgap2Q3UQ44 1575 aa15.31■□□□□ 0.04
Trim9-211ENSMUST00000223160 Wdr66E9Q743 1299 aa15.3■□□□□ 0.04
Trim9-211ENSMUST00000223160 Rapgef2Q8CHG7 1496 aa15.29■□□□□ 0.04
Trim9-211ENSMUST00000223160 Fmn1Q05860 1466 aa15.24■□□□□ 0.03
Trim9-211ENSMUST00000223160 Cep162Q6ZQ06 1403 aa15.21■□□□□ 0.03
Trim9-211ENSMUST00000223160 NefmP08553 848 aa15.2■□□□□ 0.02
Trim9-211ENSMUST00000223160 Atad2bE9Q166 1460 aaKnown RBP15.2■□□□□ 0.02
Trim9-211ENSMUST00000223160 Sall2Q9QX96 1004 aa15.19■□□□□ 0.02
Trim9-211ENSMUST00000223160 Kif15Q6P9L6 1387 aa15.19■□□□□ 0.02
Trim9-211ENSMUST00000223160 Clip1Q922J3 1391 aa15.18■□□□□ 0.02
Trim9-211ENSMUST00000223160 Dnajc5bQ9CQ94 199 aa15.15■□□□□ 0.02
Trim9-211ENSMUST00000223160 Pds5bQ4VA53 1446 aaKnown RBP15.14■□□□□ 0.01
Trim9-211ENSMUST00000223160 Eid3Q3V124 375 aa15.13■□□□□ 0.01
Trim9-211ENSMUST00000223160 Aebp2Q9Z248 504 aaKnown RBP15.13■□□□□ 0.01
Trim9-211ENSMUST00000223160 Top2aQ01320 1528 aaKnown RBP15.12■□□□□ 0.01
Trim9-211ENSMUST00000223160 Lmod2Q3UHZ5 550 aa15.11■□□□□ 0.01
Trim9-211ENSMUST00000223160 PtprkP35822 1457 aa15.09■□□□□ 0.01
Trim9-211ENSMUST00000223160 Las1lA2BE28 776 aaKnown RBP15.09■□□□□ 0.01
Trim9-211ENSMUST00000223160 Frmpd1A2AKB4 1549 aa15.08■□□□□ 0.01
Trim9-211ENSMUST00000223160 Ubl4bQ9CQ84 188 aa15.08■□□□□ 0
Trim9-211ENSMUST00000223160 Neurod1Q60867 357 aa15.02□□□□□ -0.01
Trim9-211ENSMUST00000223160 Npm1Q61937 292 aaKnown RBP15.02□□□□□ -0.01
Trim9-211ENSMUST00000223160 Ube2uB1AUC4 352 aa15.01□□□□□ -0.01
Trim9-211ENSMUST00000223160 Fam50aQ9WV03 339 aaKnown RBP14.98□□□□□ -0.01
Trim9-211ENSMUST00000223160 Ercc6F8VPZ5 1481 aa14.98□□□□□ -0.01
Trim9-211ENSMUST00000223160 Setd5Q5XJV7 1441 aa14.95□□□□□ -0.02
Trim9-211ENSMUST00000223160 Wdr62Q3U3T8 1523 aa14.93□□□□□ -0.02
Trim9-211ENSMUST00000223160 Mapk8ip2Q9ERE9 830 aa14.93□□□□□ -0.02
Trim9-211ENSMUST00000223160 Arhgap35Q91YM2 1499 aa14.91□□□□□ -0.02
Trim9-211ENSMUST00000223160 TonslQ6NZL6 1363 aa14.91□□□□□ -0.02
Trim9-211ENSMUST00000223160 Cux2P70298 1426 aa14.87□□□□□ -0.03
Trim9-211ENSMUST00000223160 BlmO88700 1416 aa14.85□□□□□ -0.03
Trim9-211ENSMUST00000223160 Eea1Q8BL66 1411 aa14.85□□□□□ -0.03
Trim9-211ENSMUST00000223160 Arap1Q4LDD4 1452 aa14.83□□□□□ -0.04
Trim9-211ENSMUST00000223160 Baz1bQ9Z277 1479 aa14.83□□□□□ -0.04
Trim9-211ENSMUST00000223160 Ccdc18Q640L5 1455 aa14.82□□□□□ -0.04
Trim9-211ENSMUST00000223160 TnnQ80Z71 1560 aa14.77□□□□□ -0.04
Trim9-211ENSMUST00000223160 Camsap1A2AHC3 1581 aa14.77□□□□□ -0.05
Trim9-211ENSMUST00000223160 Lamc3Q9R0B6 1581 aa14.76□□□□□ -0.05
Trim9-211ENSMUST00000223160 Shroom4Q1W617 1475 aa14.76□□□□□ -0.05
Trim9-211ENSMUST00000223160 Phldb1Q6PDH0 1371 aaKnown RBP14.76□□□□□ -0.05
Trim9-211ENSMUST00000223160 AqrQ8CFQ3 1481 aaKnown RBP14.75□□□□□ -0.05
Trim9-211ENSMUST00000223160 Unc13aQ4KUS2 1712 aa14.74□□□□□ -0.05
Trim9-211ENSMUST00000223160 Chic2Q9D9G3 165 aa14.72□□□□□ -0.05
Trim9-211ENSMUST00000223160 Grin2bQ01097 1482 aa14.72□□□□□ -0.05
Trim9-211ENSMUST00000223160 NrkQ9R0G8 1455 aa14.71□□□□□ -0.05
Trim9-211ENSMUST00000223160 ClspnQ80YR7 1315 aa14.7□□□□□ -0.06
Trim9-211ENSMUST00000223160 Eif4g1Q6NZJ6 1600 aaKnown RBP14.69□□□□□ -0.06
Trim9-211ENSMUST00000223160 Nop58Q6DFW4 536 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 119.4 ms