RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 InsrP15208 1372 aa12.54□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 AdgbG3UZ78 1657 aa12.54□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Fam71e1A1L3C1 212 aa12.54□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Akap12Q9WTQ5 1684 aa12.53□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Ehbp1l1Q99MS7 1716 aa12.52□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Cdk19Q8BWD8 501 aa12.51□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Prdm2A2A7B5 1709 aaKnown RBP12.51□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Zmym4A2A791 1549 aaKnown RBP12.51□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Ino80Q6ZPV2 1559 aa12.51□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Adamts7Q68SA9 1657 aa12.5□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Itsn2Q9Z0R6 1659 aa12.5□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 GsdmaQ9EST1 446 aa12.5□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 FanciQ8K368 1330 aa12.5□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Mroh1E0CZ22 1640 aa12.5□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Tex14Q7M6U3 1450 aa12.5□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Znf316Q6PGE4 1016 aa12.49□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Ahdc1Q6PAL7 1594 aaKnown RBP12.49□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 U2af1Q9D883 239 aaKnown RBP12.49□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Kif16bB1AVY7 1312 aa12.49□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 L3mbtl2P59178 703 aa12.49□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Ythdc1E9Q5K9 736 aaKnown RBP12.48□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Atf7ipQ7TT18 1306 aa12.48□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Plxnc1Q9QZC2 1574 aa12.48□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Polr3glQ8R0C0 218 aa12.48□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Cald1E9QA15 768 aaKnown RBP12.47□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 MlecQ6ZQI3 291 aaKnown RBP12.47□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Tsen2Q6P7W5 460 aa12.46□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Naip7Q9JIB3 1402 aa12.46□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Kdm5aQ3UXZ9 1690 aa12.46□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Rwdd1Q9CQK7 243 aa12.46□□□□□ -0.41
Sh3rf1-202ENSMUST00000209611 Mapk8ip3Q9ESN9 1337 aa12.46□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Trpm1Q2TV84 1622 aa12.46□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Zranb1Q7M760 708 aa12.46□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Ralbp1Q62172 648 aa12.44□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 NgefQ8CHT1 710 aa12.44□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Apbb1Q9QXJ1 710 aa12.44□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 CltcQ68FD5 1675 aaKnown RBP12.44□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Asxl2Q8BZ32 1370 aa12.43□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Cdk5rap2Q8K389 1822 aa12.43□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Birc3O08863 600 aa12.43□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Arhgap23Q69ZH9 1483 aa12.43□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Gprasp1Q5U4C1 1347 aa12.43□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Ccdc30Q8BVF4 654 aa12.42□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Kank1E9Q238 1360 aa12.42□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 DnmbpQ6TXD4 1580 aa12.42□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Tcerg1Q8CGF7 1100 aaKnown RBP12.41□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 HnrnpmQ9D0E1 729 aaKnown RBP12.41□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Mbd3Q9Z2D8 285 aaKnown RBP12.41□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Cul9Q80TT8 1865 aa12.41□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Taok2Q6ZQ29 1240 aa12.41□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 DaxxO35613 739 aa12.4□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Trim26Q99PN3 545 aa12.4□□□□□ -0.42
Sh3rf1-202ENSMUST00000209611 Eif2ak4Q9QZ05 1648 aa12.39□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Nolc1E9Q5C9 702 aaKnown RBP12.39□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Plekhg1F6S200 1446 aa12.39□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Map4k4P97820 1233 aaKnown RBP12.39□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Ercc6l2Q9JIM3 1537 aa12.39□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 IbtkQ6ZPR6 1352 aaKnown RBP12.39□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 PtprmP28828 1452 aa12.39□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Plekhh1Q80TI1 1356 aa12.39□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Dnajc5gQ8C632 165 aa12.38□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Slc4a3P16283 1227 aa12.38□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Qser1A2BIE1 1698 aa12.38□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 MaddQ80U28 1577 aa12.38□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 NinlQ6ZQ12 1394 aa12.38□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Apaf1O88879 1249 aa12.36□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Scaf11E9PZM7 1456 aaKnown RBP12.36□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Sox12Q04890 314 aa12.36□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Uspl1Q3ULM6 1089 aa12.36□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Idi2Q8BFZ6 227 aa12.35□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 GphnQ8BUV3 769 aaKnown RBP12.35□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Supt16hQ920B9 1047 aa12.35□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Sipa1l1Q8C0T5 1782 aa12.35□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Ksr2Q3UVC0 959 aa12.34□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Q3UJC8 639 aa12.34□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Cep170bQ80U49 1574 aa12.33□□□□□ -0.43
Sh3rf1-202ENSMUST00000209611 Erbb3Q61526 1339 aa12.33□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Kcnh8P59111 1102 aa12.33□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 KdrP35918 1367 aa12.33□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Map3k19E9Q3S4 1311 aa12.32□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Ciz1Q8VEH2 845 aa12.32□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Prkrip1Q9CWV6 186 aaKnown RBP12.32□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Kiaa1107Q80TK0 1369 aa12.32□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 PzpQ61838 1495 aa12.32□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 NudcO35685 332 aaKnown RBP12.32□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Ecm2Q5FW85 670 aa12.32□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Ccar1Q8CH18 1146 aaKnown RBP12.32□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Rangap1P46061 589 aaKnown RBP12.31□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Iqcf3Q9D498 203 aa12.31□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 CatipB9EKE5 520 aa12.31□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Podxl2Q8CAE9 603 aa12.31□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Arhgef28P97433 1693 aa12.31□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Ap3b2Q9JME5 1082 aa12.31□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Kif13aQ9EQW7 1749 aa12.3□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Usp19Q3UJD6 1360 aa12.3□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Myom1Q62234 1667 aaKnown RBP12.3□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Dusp27Q148W8 1138 aa12.29□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Zfp777B9EKF4 885 aa12.29□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Cavin4A2AMM0 362 aa12.29□□□□□ -0.44
Sh3rf1-202ENSMUST00000209611 Slc12a5Q91V14 1138 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 166.5 ms