RNA–Protein interactions for RNA: ENSMUST00000197488.4

Csde1-206, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-206ENSMUST00000197488 Znf316Q6PGE4 1016 aa8.2□□□□□ -1.1
Csde1-206ENSMUST00000197488 Trim44Q9QXA7 346 aa8.2□□□□□ -1.1
Csde1-206ENSMUST00000197488 Lemd3Q9WU40 921 aa8.2□□□□□ -1.1
Csde1-206ENSMUST00000197488 Edc4Q3UJB9 1406 aaKnown RBP8.2□□□□□ -1.1
Csde1-206ENSMUST00000197488 U2surpQ6NV83 1029 aaKnown RBP8.19□□□□□ -1.1
Csde1-206ENSMUST00000197488 Atf7ipQ7TT18 1306 aa8.19□□□□□ -1.1
Csde1-206ENSMUST00000197488 Birc3O08863 600 aa8.19□□□□□ -1.1
Csde1-206ENSMUST00000197488 Map7O88735 730 aa8.19□□□□□ -1.1
Csde1-206ENSMUST00000197488 Fmn2Q9JL04 1578 aa8.19□□□□□ -1.1
Csde1-206ENSMUST00000197488 Paxip1Q6NZQ4 1056 aa8.19□□□□□ -1.1
Csde1-206ENSMUST00000197488 Maco1Q7TQE6 664 aaKnown RBP8.19□□□□□ -1.1
Csde1-206ENSMUST00000197488 P2rx7Q9Z1M0 595 aa8.19□□□□□ -1.1
Csde1-206ENSMUST00000197488 AI481877A2ALV5 1481 aa8.18□□□□□ -1.1
Csde1-206ENSMUST00000197488 Ccdc146E9Q9F7 977 aa8.18□□□□□ -1.1
Csde1-206ENSMUST00000197488 Eif4g3Q80XI3 1579 aaKnown RBP8.18□□□□□ -1.1
Csde1-206ENSMUST00000197488 Adgrl2Q8JZZ7 1487 aa8.18□□□□□ -1.1
Csde1-206ENSMUST00000197488 Cald1E9QA15 768 aaKnown RBP8.18□□□□□ -1.1
Csde1-206ENSMUST00000197488 Kif18aQ91WD7 886 aa8.18□□□□□ -1.1
Csde1-206ENSMUST00000197488 Iqgap1Q9JKF1 1657 aaKnown RBP8.18□□□□□ -1.1
Csde1-206ENSMUST00000197488 Rbm25B2RY56 838 aaKnown RBP8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Il4rP16382 810 aa8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Pdcl3Q8BVF2 240 aa8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Chmp4cQ9D7F7 232 aa8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Ttc21bQ0HA38 1315 aa8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Sbno1Q689Z5 1390 aa8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Pibf1E9Q6K3 756 aa8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 G3bp1P97855 465 aaKnown RBP8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Tfip11Q9ERA6 838 aaKnown RBP8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Adamts13Q769J6 1426 aa8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Abcc6Q9R1S7 1498 aa8.17□□□□□ -1.1
Csde1-206ENSMUST00000197488 Setd1bQ8CFT2 1985 aa8.16□□□□□ -1.1
Csde1-206ENSMUST00000197488 Mcm4P49717 862 aa8.16□□□□□ -1.1
Csde1-206ENSMUST00000197488 Ttc41Q692V3 1318 aa8.16□□□□□ -1.1
Csde1-206ENSMUST00000197488 Gapvd1Q6PAR5 1458 aa8.16□□□□□ -1.1
Csde1-206ENSMUST00000197488 Tulp4Q9JIL5 1547 aa8.16□□□□□ -1.1
Csde1-206ENSMUST00000197488 Gm14025A2AP89 1413 aa8.16□□□□□ -1.1
Csde1-206ENSMUST00000197488 Nsfl1cQ9CZ44 370 aaKnown RBP8.16□□□□□ -1.1
Csde1-206ENSMUST00000197488 Tbc1d32Q3URV1 1296 aa8.15□□□□□ -1.1
Csde1-206ENSMUST00000197488 Erich6bQ9D4S6 220 aa8.15□□□□□ -1.1
Csde1-206ENSMUST00000197488 KnstrnQ9D9Z1 312 aaKnown RBP8.15□□□□□ -1.1
Csde1-206ENSMUST00000197488 Ythdc1E9Q5K9 736 aaKnown RBP8.15□□□□□ -1.1
Csde1-206ENSMUST00000197488 Map4k4P97820 1233 aaKnown RBP8.15□□□□□ -1.1
Csde1-206ENSMUST00000197488 Atl3Q91YH5 541 aa8.15□□□□□ -1.1
Csde1-206ENSMUST00000197488 Dmrtc1Q9D9R7 182 aa8.15□□□□□ -1.1
Csde1-206ENSMUST00000197488 Fam208aQ69ZR9 1610 aaKnown RBP8.15□□□□□ -1.1
Csde1-206ENSMUST00000197488 PtmaP26350 111 aa8.15□□□□□ -1.11
Csde1-206ENSMUST00000197488 Nek4Q9Z1J2 792 aa8.15□□□□□ -1.11
Csde1-206ENSMUST00000197488 Fgd6Q69ZL1 1399 aa8.14□□□□□ -1.11
Csde1-206ENSMUST00000197488 Stard8Q8K031 1019 aa8.14□□□□□ -1.11
Csde1-206ENSMUST00000197488 Kcnn1Q9EQR3 537 aa8.14□□□□□ -1.11
Csde1-206ENSMUST00000197488 Irx6Q9ER75 438 aa8.14□□□□□ -1.11
Csde1-206ENSMUST00000197488 Col17a1Q07563 1470 aa8.14□□□□□ -1.11
Csde1-206ENSMUST00000197488 Terf2O35144 541 aa8.14□□□□□ -1.11
Csde1-206ENSMUST00000197488 Trap1aP19473 224 aa8.14□□□□□ -1.11
Csde1-206ENSMUST00000197488 Shq1Q7TMX5 569 aa8.14□□□□□ -1.11
Csde1-206ENSMUST00000197488 SkilQ60665 675 aa8.13□□□□□ -1.11
Csde1-206ENSMUST00000197488 CenpjQ569L8 1344 aa8.13□□□□□ -1.11
Csde1-206ENSMUST00000197488 Cc2d1aQ8K1A6 943 aa8.13□□□□□ -1.11
Csde1-206ENSMUST00000197488 Atp10dQ8K2X1 1416 aa8.12□□□□□ -1.11
Csde1-206ENSMUST00000197488 IbspQ61711 324 aa8.12□□□□□ -1.11
Csde1-206ENSMUST00000197488 IbtkQ6ZPR6 1352 aaKnown RBP8.12□□□□□ -1.11
Csde1-206ENSMUST00000197488 Phlpp2Q8BXA7 1320 aa8.12□□□□□ -1.11
Csde1-206ENSMUST00000197488 Mast1Q9R1L5 1570 aa8.11□□□□□ -1.11
Csde1-206ENSMUST00000197488 Triml2E9PW10 424 aa8.11□□□□□ -1.11
Csde1-206ENSMUST00000197488 Utp14aQ640M1 767 aaKnown RBP8.11□□□□□ -1.11
Csde1-206ENSMUST00000197488 Tmc1Q8R4P5 757 aa8.11□□□□□ -1.11
Csde1-206ENSMUST00000197488 CastP51125 788 aa8.11□□□□□ -1.11
Csde1-206ENSMUST00000197488 Rsph3aQ3UFY4 516 aa8.11□□□□□ -1.11
Csde1-206ENSMUST00000197488 Gtf2a1Q99PM3 378 aa8.11□□□□□ -1.11
Csde1-206ENSMUST00000197488 PalmQ9Z0P4 383 aa8.11□□□□□ -1.11
Csde1-206ENSMUST00000197488 Pdlim2Q8R1G6 349 aa8.11□□□□□ -1.11
Csde1-206ENSMUST00000197488 Ppip5k1A2ARP1 1436 aa8.1□□□□□ -1.11
Csde1-206ENSMUST00000197488 NgefQ8CHT1 710 aa8.1□□□□□ -1.11
Csde1-206ENSMUST00000197488 Antxr1Q9CZ52 562 aa8.1□□□□□ -1.11
Csde1-206ENSMUST00000197488 Phf14Q9D4H9 881 aa8.1□□□□□ -1.11
Csde1-206ENSMUST00000197488 Rrbp1Q99PL5 1605 aaKnown RBP8.1□□□□□ -1.11
Csde1-206ENSMUST00000197488 Znf521Q6KAS7 1311 aa8.1□□□□□ -1.11
Csde1-206ENSMUST00000197488 Mcm10Q0VBD2 885 aa8.1□□□□□ -1.11
Csde1-206ENSMUST00000197488 Q9D9H8 365 aa8.1□□□□□ -1.11
Csde1-206ENSMUST00000197488 Cavin4A2AMM0 362 aa8.1□□□□□ -1.11
Csde1-206ENSMUST00000197488 Setd1aE9PYH6 1716 aa8.09□□□□□ -1.11
Csde1-206ENSMUST00000197488 AatkQ80YE4 1365 aa8.09□□□□□ -1.11
Csde1-206ENSMUST00000197488 Znf608Q56A10 1511 aa8.09□□□□□ -1.11
Csde1-206ENSMUST00000197488 Q3UPC7 1272 aa8.09□□□□□ -1.11
Csde1-206ENSMUST00000197488 Slc12a5Q91V14 1138 aa8.09□□□□□ -1.11
Csde1-206ENSMUST00000197488 Usp16Q99LG0 825 aa8.09□□□□□ -1.11
Csde1-206ENSMUST00000197488 Rbm10Q99KG3 930 aaKnown RBP8.09□□□□□ -1.11
Csde1-206ENSMUST00000197488 Smarca5Q91ZW3 1051 aaKnown RBP8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 Klhdc4Q921I2 584 aa8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 Kif2cQ922S8 721 aa8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 Usp54Q8BL06 1588 aaKnown RBP8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 Tbc1d9Q3UYK3 1264 aa8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 Plekhm2Q80TQ5 1018 aa8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 Atp2b2Q9R0K7 1198 aa8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 Swt1Q9DBQ9 907 aa8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 Cabp2Q9JLK4 216 aa8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 Scaf11E9PZM7 1456 aaKnown RBP8.08□□□□□ -1.12
Csde1-206ENSMUST00000197488 CalcaP70160 136 aa8.07□□□□□ -1.12
Csde1-206ENSMUST00000197488 Myo3aQ8K3H5 1613 aa8.07□□□□□ -1.12
Csde1-206ENSMUST00000197488 Cep170Q6A065 1588 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms