RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 RictorQ6QI06 1708 aa17.67■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 Itsn1Q9Z0R4 1714 aa17.67■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 CltcQ68FD5 1675 aaKnown RBP17.66■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 Afap1Q80YS6 731 aa17.66■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 Esx1O88933 382 aa17.65■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 Nlrp6Q91WS2 869 aa17.65■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 Arhgef28P97433 1693 aa17.64■□□□□ 0.42
Pdlim5-208ENSMUST00000196220 Nrxn1Q9CS84 1514 aa17.64■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Kif16bB1AVY7 1312 aa17.64■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Erbb3Q61526 1339 aa17.64■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Kif13aQ9EQW7 1749 aa17.63■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Shq1Q7TMX5 569 aa17.62■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Zc3h13E9Q784 1729 aaKnown RBP17.62■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Scaf11E9PZM7 1456 aaKnown RBP17.61■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Mbd3Q9Z2D8 285 aaKnown RBP17.61■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 TnikP83510 1323 aa17.6■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Med14A2ABV5 1459 aaKnown RBP17.6■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Map4k4P97820 1233 aaKnown RBP17.59■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Ncbp3Q8BZR9 615 aaKnown RBP17.59■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Adgrl1Q80TR1 1466 aa17.59■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 Usp19Q3UJD6 1360 aa17.59■□□□□ 0.41
Pdlim5-208ENSMUST00000196220 IbtkQ6ZPR6 1352 aaKnown RBP17.58■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Plekhh1Q80TI1 1356 aa17.58■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Cald1E9QA15 768 aaKnown RBP17.58■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Ppp4r2Q0VGB7 417 aa17.58■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Gemin5Q8BX17 1502 aaKnown RBP17.57■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Kiaa1107Q80TK0 1369 aa17.57■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Dip2aQ8BWT5 1523 aa17.57■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Nolc1E9Q5C9 702 aaKnown RBP17.56■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Rad21Q61550 635 aaKnown RBP17.56■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Ralbp1Q62172 648 aa17.56■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Exosc9Q9JHI7 438 aaKnown RBP17.56■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Golga2Q921M4 999 aa17.55■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 PplQ9R269 1755 aa17.55■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Gsto1O09131 240 aa17.55■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 NeflP08551 543 aa17.55■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Cnga1P29974 684 aa17.55■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Atp1b4Q99ME6 356 aa17.55■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Prkrip1Q9CWV6 186 aaKnown RBP17.55■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 FanciQ8K368 1330 aa17.55■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Cep170bQ80U49 1574 aa17.54■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Uspl1Q3ULM6 1089 aa17.54■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 CrbnQ8C7D2 445 aa17.54■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Stk26Q99JT2 416 aa17.54■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Myt1Q8CFC2 1127 aa17.53■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 NktrP30415 1453 aa17.53■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Ercc6l2Q9JIM3 1537 aa17.52■□□□□ 0.4
Pdlim5-208ENSMUST00000196220 Utp14aQ640M1 767 aaKnown RBP17.52■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Q9D9H8 365 aa17.52■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 GsdmaQ9EST1 446 aa17.52■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Fam71e1A1L3C1 212 aa17.5■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Speer4f1Q9D5Q6 258 aa17.5■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Atp2b2Q9R0K7 1198 aa17.5■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Abca14E9Q8F8 1683 aa17.49■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Ccdc30Q8BVF4 654 aa17.49■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Rwdd1Q9CQK7 243 aa17.49■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Iqsec2Q5DU25 1478 aa17.48■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Tcerg1Q8CGF7 1100 aaKnown RBP17.48■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Nwd1A6H603 1563 aa17.47■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Adamtsl3G3UXC7 1706 aa17.47■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Zmym3Q9JLM4 1370 aa17.47■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Cdk19Q8BWD8 501 aa17.47■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Chd2E9PZM4 1827 aaKnown RBP17.46■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Supt16hQ920B9 1047 aa17.46■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Znf541Q0GGX2 1363 aa17.46■□□□□ 0.39
Pdlim5-208ENSMUST00000196220 Rtl5Q5DTT4 599 aa17.44■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 Ciz1Q8VEH2 845 aa17.44■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 P2rx7Q9Z1M0 595 aa17.44■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 Cps1Q8C196 1500 aa17.43■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 Slit3Q9WVB4 1523 aa17.43■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 Psme1P97371 249 aa17.41■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 Pik3r4Q8VD65 1358 aa17.41■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 AampJ3QN89 436 aa17.41■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 Lmtk3Q5XJV6 1424 aa17.4■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 NinlQ6ZQ12 1394 aa17.39■□□□□ 0.38
Pdlim5-208ENSMUST00000196220 Tsen2Q6P7W5 460 aa17.38■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 PtpruB1AUH1 1446 aa17.38■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Txndc2Q6P902 515 aa17.38■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Sirt1Q923E4 737 aa17.38■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Arap3Q8R5G7 1538 aa17.37■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Prdm10Q3UTQ7 1184 aa17.37■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Liat1Q810M6 228 aa17.37■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Map3k19E9Q3S4 1311 aa17.37■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Usp32F8VPZ3 1604 aa17.36■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Kcnh8P59111 1102 aa17.36■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 PzpQ61838 1495 aa17.36■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Idi2Q8BFZ6 227 aa17.35■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 U2af1Q9D883 239 aaKnown RBP17.35■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Neurod2Q62414 383 aa17.35■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Fchsd2Q3USJ8 740 aa17.34■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Trim28Q62318 834 aa17.34■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 Uhrf1bp1B2KF50 1429 aa17.33■□□□□ 0.37
Pdlim5-208ENSMUST00000196220 PaskQ8CEE6 1383 aa17.33■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Hoxb7P09024 217 aa17.33■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Zranb1Q7M760 708 aa17.33■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Kif1aP33173 1695 aa17.32■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Kdm2bQ6P1G2 1309 aa17.31■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Rims2Q9EQZ7 1530 aa17.31■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Fam135bQ9DAI6 1403 aa17.31■□□□□ 0.36
Pdlim5-208ENSMUST00000196220 Bcl9Q9D219 1425 aa17.3■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 166.6 ms