RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Ift172Q6VH22 1749 aa22.75■■□□□ 1.23
Hoxc4-202ENSMUST00000165375 Sbno1Q689Z5 1390 aa22.74■■□□□ 1.23
Hoxc4-202ENSMUST00000165375 IghaA0A0A6YXW6 389 aa22.73■■□□□ 1.23
Hoxc4-202ENSMUST00000165375 CenpjQ569L8 1344 aa22.73■■□□□ 1.23
Hoxc4-202ENSMUST00000165375 Plekhg1F6S200 1446 aa22.72■■□□□ 1.23
Hoxc4-202ENSMUST00000165375 Pank3Q8R2W9 370 aa22.72■■□□□ 1.23
Hoxc4-202ENSMUST00000165375 Slit3Q9WVB4 1523 aa22.71■■□□□ 1.23
Hoxc4-202ENSMUST00000165375 PrxO55103 1391 aa22.71■■□□□ 1.23
Hoxc4-202ENSMUST00000165375 Topaz1E5FYH1 1653 aa22.7■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Tmf1B9EKI3 1091 aa22.7■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Wdr43Q6ZQL4 677 aaKnown RBP22.7■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Slc4a1apE9PX68 744 aa22.69■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Cep170bQ80U49 1574 aa22.68■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 PzpQ61838 1495 aa22.68■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Lmtk3Q5XJV6 1424 aa22.67■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Tubgcp6G5E8P0 1769 aa22.66■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Gm16486A0A1D5RMD1 1434 aa22.66■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Fam184bQ0KK56 942 aa22.66■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 InsrP15208 1372 aa22.66■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Pik3r4Q8VD65 1358 aa22.64■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Inpp5dQ9ES52 1191 aa22.64■■□□□ 1.22
Hoxc4-202ENSMUST00000165375 Atp2b2Q9R0K7 1198 aa22.63■■□□□ 1.21
Hoxc4-202ENSMUST00000165375 Mink1Q9JM52 1308 aa22.63■■□□□ 1.21
Hoxc4-202ENSMUST00000165375 Ccdc9Q8VC31 543 aaKnown RBP22.61■■□□□ 1.21
Hoxc4-202ENSMUST00000165375 Zscan10Q3URR7 782 aa22.6■■□□□ 1.21
Hoxc4-202ENSMUST00000165375 Ppp4r2Q0VGB7 417 aa22.6■■□□□ 1.21
Hoxc4-202ENSMUST00000165375 HnrnpmQ9D0E1 729 aaKnown RBP22.58■■□□□ 1.21
Hoxc4-202ENSMUST00000165375 Scaf11E9PZM7 1456 aaKnown RBP22.58■■□□□ 1.21
Hoxc4-202ENSMUST00000165375 Amer1Q7TS75 1132 aa22.57■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Rimbp3Q3V0F0 1606 aa22.55■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Gsto1O09131 240 aa22.55■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Cnga1P29974 684 aa22.55■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Ccdc27Q3V036 639 aa22.55■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Cdk19Q8BWD8 501 aa22.55■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Exosc9Q9JHI7 438 aaKnown RBP22.55■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Cps1Q8C196 1500 aa22.55■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Arap3Q8R5G7 1538 aa22.55■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Wwc2Q6NXJ0 1187 aa22.55■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Abca14E9Q8F8 1683 aa22.54■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Upf2A2AT37 1269 aaKnown RBP22.53■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Exoc6Q8R313 802 aa22.53■■□□□ 1.2
Hoxc4-202ENSMUST00000165375 Nwd1A6H603 1563 aa22.51■■□□□ 1.19
Hoxc4-202ENSMUST00000165375 Brwd3A2AHJ4 1799 aa22.5■■□□□ 1.19
Hoxc4-202ENSMUST00000165375 Anp32bQ9EST5 272 aaKnown RBP22.5■■□□□ 1.19
Hoxc4-202ENSMUST00000165375 Rims2Q9EQZ7 1530 aa22.5■■□□□ 1.19
Hoxc4-202ENSMUST00000165375 NktrP30415 1453 aa22.48■■□□□ 1.19
Hoxc4-202ENSMUST00000165375 Mrs2Q5NCE8 434 aa22.47■■□□□ 1.19
Hoxc4-202ENSMUST00000165375 FanciQ8K368 1330 aa22.47■■□□□ 1.19
Hoxc4-202ENSMUST00000165375 Zranb1Q7M760 708 aa22.46■■□□□ 1.19
Hoxc4-202ENSMUST00000165375 PnisrA2AJT4 805 aaKnown RBP22.45■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Dcaf11Q91VU6 549 aa22.45■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Q3UJC8 639 aa22.44■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Liat1Q810M6 228 aa22.44■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Gprasp1Q5U4C1 1347 aa22.43■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Usp32F8VPZ3 1604 aa22.42■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Med1Q925J9 1575 aa22.41■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Kif7B7ZNG0 1348 aa22.41■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Phlpp1Q8CHE4 1687 aa22.41■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Sirt1Q923E4 737 aa22.4■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 NrdcQ8BHG1 1161 aa22.39■■□□□ 1.18
Hoxc4-202ENSMUST00000165375 Nrxn3Q6P9K9 1571 aa22.38■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Slc4a2P13808 1237 aaKnown RBP22.38■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Pak3Q61036 559 aa22.37■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Rreb1Q3UH06 1700 aaKnown RBP22.37■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Egfem1Q8C088 590 aa22.37■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Pik3c2bE9QAN8 1632 aa22.37■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Idi2Q8BFZ6 227 aa22.36■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Adgrl1Q80TR1 1466 aa22.36■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Nrxn1Q9CS84 1514 aa22.36■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Prdm10Q3UTQ7 1184 aa22.36■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Map3k19E9Q3S4 1311 aa22.36■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Ppp2r1aQ76MZ3 589 aa22.35■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Rpgrip1lQ8CG73 1264 aa22.34■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Ipo9Q91YE6 1041 aa22.34■■□□□ 1.17
Hoxc4-202ENSMUST00000165375 Thsd7aQ69ZU6 1645 aa22.33■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Tns3Q5SSZ5 1440 aa22.32■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 KdrP35918 1367 aa22.32■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Tmem94Q7TSH8 1360 aa22.32■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Rab3gap2Q8BMG7 1366 aa22.32■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Znf316Q6PGE4 1016 aa22.32■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 PtpruB1AUH1 1446 aa22.31■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Kif20bQ80WE4 1774 aaKnown RBP22.3■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Gm10563F6WIE4 79 aa22.3■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Rapgef3Q8VCC8 918 aa22.3■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Scn4aQ9ER60 1841 aa22.29■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Tex14Q7M6U3 1450 aa22.29■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Gtf3c3Q3TMP1 882 aa22.28■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Q7TT23 1179 aa22.28■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 D430041D05RikF6ZGR6 1678 aa22.28■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 NinlQ6ZQ12 1394 aa22.28■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Eif5bQ05D44 1216 aaKnown RBP22.28■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 CatipB9EKE5 520 aa22.27■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Tnrc6bQ8BKI2 1810 aaKnown RBP22.27■■□□□ 1.16
Hoxc4-202ENSMUST00000165375 Pip4k2bQ80XI4 416 aa22.27■■□□□ 1.15
Hoxc4-202ENSMUST00000165375 Zscan21Q07231 555 aa22.25■■□□□ 1.15
Hoxc4-202ENSMUST00000165375 Hsp90aa1P07901 733 aaKnown RBP22.24■■□□□ 1.15
Hoxc4-202ENSMUST00000165375 Irx3P81067 507 aa22.23■■□□□ 1.15
Hoxc4-202ENSMUST00000165375 C5P06684 1680 aa22.23■■□□□ 1.15
Hoxc4-202ENSMUST00000165375 Idi1P58044 227 aa22.22■■□□□ 1.15
Hoxc4-202ENSMUST00000165375 Als2Q920R0 1651 aa22.22■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms