RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Rnf214Q8BFU3 668 aaKnown RBP15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Necab1Q8BG18 352 aa15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ints3Q7TPD0 1041 aaKnown RBP15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Psma5Q9Z2U1 241 aaKnown RBP15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Me1P06801 572 aa15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ubap1lG3UW59 384 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ncoa2Q61026 1462 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ccdc171E9Q1U1 1324 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 TatQ8QZR1 454 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 UvssaQ9D479 717 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Gcom1E9PZ54 550 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 MyzapQ3UIJ9 466 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 March6Q6ZQ89 909 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Zkscan2G3X952 960 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ppp2r3aB2RXC8 1150 aa15.42■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Q7TT23 1179 aa15.42■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Prdm16A2A935 1275 aa15.42■□□□□ 0.06
Gm28043-201ENSMUST00000130871 1700010I14RikQ7TPG0 532 aa15.42■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Pabpn1Q8CCS6 302 aaKnown RBP15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Bcl2l13P59017 434 aa15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Gnl3lQ6PGG6 577 aaKnown RBP15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 A0A0U1RNP2 1173 aa15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 BcanQ61361 883 aa15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Rufy1Q8BIJ7 712 aa15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Mphosph10Q810V0 681 aaKnown RBP15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Cavin4A2AMM0 362 aa15.4■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Eva1cP58659 440 aa15.4■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ipo4Q8VI75 1082 aa15.4■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Q9D9H8 365 aa15.4■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Rbm28Q8CGC6 750 aaKnown RBP15.39■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Ppp2r1aQ76MZ3 589 aa15.39■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Stk3Q9JI10 497 aa15.39■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Tnpo1Q8BFY9 898 aaKnown RBP15.39■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Slc4a2P13808 1237 aaKnown RBP15.38■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Zfp444Q3TDV8 331 aaKnown RBP15.38■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Anp32eP97822 260 aaKnown RBP15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Zfp644E9QA22 1323 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 PdcQ9QW08 244 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Smarca2Q6DIC0 1577 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Gm10471E9Q1C7 252 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 HypkQ9CR41 129 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Pnmal2G3X9N3 661 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Gtf2f1Q3THK3 508 aaKnown RBP15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Lrrcc1Q69ZB0 1026 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Kif3cO35066 796 aa15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Smc2Q8CG48 1191 aaKnown RBP15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Vps8Q0P5W1 1427 aa15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 AnlnQ8K298 1121 aaKnown RBP15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Apaf1O88879 1249 aa15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Rab3gap2Q8BMG7 1366 aa15.35■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Stk11ipQ3TAA7 1072 aa15.35■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Pdcl3Q8BVF2 240 aa15.35■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Cux1P53564 1515 aa15.35■□□□□ 0.05
Gm28043-201ENSMUST00000130871 HmmrQ00547 794 aaKnown RBP15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Zkscan1Q8BGS3 561 aaKnown RBP15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Hap1O35668 628 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Sirt1Q923E4 737 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 IbspQ61711 324 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 OptnQ8K3K8 584 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Q9D9S1 216 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Nap1l1P28656 391 aaKnown RBP15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Odf2lQ9D478 642 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Mns1Q61884 491 aa15.33■□□□□ 0.04
Gm28043-201ENSMUST00000130871 PsapQ61207 557 aaKnown RBP15.33■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Gnai2P08752 355 aaKnown RBP15.33■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Zpr1Q62384 459 aa15.33■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Agtpbp1Q641K1 1218 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Gcc1Q9D4H2 778 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Nphp1Q9QY53 687 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Abl1P00520 1123 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Atf3Q60765 181 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Ift140E9PY46 1464 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Shroom4Q1W617 1475 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Chrna2Q91X60 512 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Fmnl2A2APV2 1086 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Zranb3Q6NZP1 1069 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Smarca4Q3TKT4 1613 aaKnown RBP15.3■□□□□ 0.04
Gm28043-201ENSMUST00000130871 TefQ9JLC6 301 aa15.3■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Cd109Q8R422 1442 aa15.3■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Tmco3Q8BH01 678 aa15.3■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Babam1Q3UI43 333 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Sycp1Q62209 993 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Ncbp3Q8BZR9 615 aaKnown RBP15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Stk38Q91VJ4 465 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Efcab5A0JP43 1406 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Cdkn1cP49919 348 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Cnnm1Q0GA42 951 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Dusp9Q7TNL7 452 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Pknox2Q8BG99 474 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 MpripP97434 1024 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Prm3Q62100 101 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Fkbp4P30416 458 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Smg7Q5RJH6 1138 aaKnown RBP15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Tubb6Q922F4 447 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Stard3nlQ9DCI3 235 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Ppp4r3bQ922R5 820 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Tmc1Q8R4P5 757 aa15.27■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Kcnh8P59111 1102 aa15.27■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Nol8Q3UHX0 1147 aaKnown RBP15.27■□□□□ 0.03
Gm28043-201ENSMUST00000130871 Dusp27Q148W8 1138 aa15.27■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms