RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Ttll13A4Q9F6 804 aa21.01■□□□□ 0.95
Pcf11-201ENSMUST00000119954 CrcpO35427 148 aa21.01■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Neurod6P48986 337 aa21■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Ppm1eQ80TL0 749 aa21■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Fam184bQ0KK56 942 aa20.99■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Erlin2Q8BFZ9 340 aa20.99■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Kiaa0753Q6A000 959 aa20.98■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Ric3Q8BPM6 367 aa20.98■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Me1P06801 572 aa20.98■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Gtf2f1Q3THK3 508 aaKnown RBP20.98■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Shq1Q7TMX5 569 aa20.98■□□□□ 0.95
Pcf11-201ENSMUST00000119954 OptnQ8K3K8 584 aa20.98■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Sf3b2Q3UJB0 878 aaKnown RBP20.98■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Fyb1O35601 819 aa20.97■□□□□ 0.95
Pcf11-201ENSMUST00000119954 MycnP03966 462 aaKnown RBP20.97■□□□□ 0.95
Pcf11-201ENSMUST00000119954 CastP51125 788 aa20.97■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Tnpo1Q8BFY9 898 aaKnown RBP20.97■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Olfml1Q8BSH2 233 aa20.96■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Nat10Q8K224 1024 aaKnown RBP20.96■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Rbm5Q91YE7 815 aaKnown RBP20.96■□□□□ 0.95
Pcf11-201ENSMUST00000119954 SelenooQ9DBC0 667 aa20.96■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Smc2Q8CG48 1191 aaKnown RBP20.96■□□□□ 0.95
Pcf11-201ENSMUST00000119954 Ccdc30Q8BVF4 654 aa20.95■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Commd10Q8JZY2 202 aa20.95■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Ccdc102aQ3TMW1 549 aa20.95■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Zkscan1Q8BGS3 561 aaKnown RBP20.95■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Cyp46a1Q9WVK8 500 aa20.95■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Ppp2r3aB2RXC8 1150 aa20.95■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Mcm2P97310 904 aa20.95■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Baz1aO88379 1555 aa20.95■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Usp47Q8BY87 1376 aa20.94■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Bag1Q60739 355 aa20.94■□□□□ 0.94
Pcf11-201ENSMUST00000119954 AnlnQ8K298 1121 aaKnown RBP20.94■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Mex3cQ05A36 652 aaKnown RBP20.94■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Q8C5K5 320 aa20.94■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Mink1Q9JM52 1308 aa20.94■□□□□ 0.94
Pcf11-201ENSMUST00000119954 TimelessQ9R1X4 1197 aa20.94■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Plekhh2Q8C115 1491 aa20.94■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Trim30cD3YVI9 513 aa20.94■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Pank1Q8K4K6 548 aa20.93■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Map9Q3TRR0 646 aa20.93■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Bcl2l13P59017 434 aa20.92■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Lrrcc1Q69ZB0 1026 aa20.92■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Abl1P00520 1123 aa20.92■□□□□ 0.94
Pcf11-201ENSMUST00000119954 CenphQ9QYM8 241 aa20.92■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Fbln2P37889 1221 aa20.91■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Zscan10Q3URR7 782 aa20.91■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Sirt1Q923E4 737 aa20.91■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Usp16Q99LG0 825 aa20.91■□□□□ 0.94
Pcf11-201ENSMUST00000119954 ItpripQ3TNL8 555 aa20.91■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Ccdc83Q9D4V3 305 aa20.91■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Gnai1B2RSH2 354 aa20.91■□□□□ 0.94
Pcf11-201ENSMUST00000119954 UvssaQ9D479 717 aa20.91■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Gnai3Q9DC51 354 aa20.91■□□□□ 0.94
Pcf11-201ENSMUST00000119954 SkilQ60665 675 aa20.9■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Pip4k2aO70172 405 aa20.9■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Phldb2Q8K1N2 1249 aa20.9■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Rsph4aQ8BYM7 716 aa20.89■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Ppp4r3bQ922R5 820 aa20.89■□□□□ 0.94
Pcf11-201ENSMUST00000119954 Paxip1Q6NZQ4 1056 aa20.89■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Ccdc181Q80ZU5 509 aa20.88■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Zpr1Q62384 459 aa20.88■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Luc7lQ9CYI4 371 aaKnown RBP20.88■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Kcnn1Q9EQR3 537 aa20.88■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Stk38Q91VJ4 465 aa20.87■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Zkscan2G3X952 960 aa20.87■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Eif3aP23116 1344 aaKnown RBP20.87■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Dhx57Q6P5D3 1388 aaKnown RBP20.87■□□□□ 0.93
Pcf11-201ENSMUST00000119954 TnmdQ9EP64 317 aa20.87■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Sugp2Q8CH09 1067 aa20.87■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Rbm28Q8CGC6 750 aaKnown RBP20.86■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Plekhh1Q80TI1 1356 aa20.86■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Arglu1Q3UL36 271 aaKnown RBP20.86■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Atf3Q60765 181 aa20.85■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Spag5Q7TME2 1165 aa20.85■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Usp40Q8BWR4 1235 aa20.85■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Otud6bQ8K2H2 294 aa20.85■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Cep89Q9CZX2 791 aa20.84■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Frmd3Q8BHD4 595 aa20.84■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Slc13a4Q8BZ82 625 aa20.84■□□□□ 0.93
Pcf11-201ENSMUST00000119954 NacadQ5SWP3 1504 aa20.84■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Rbm25B2RY56 838 aaKnown RBP20.84■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Pdia4P08003 638 aaKnown RBP20.84■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Ift57Q8BXG3 429 aa20.84■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Babam1Q3UI43 333 aa20.84■□□□□ 0.93
Pcf11-201ENSMUST00000119954 TxlnbQ8VBT1 685 aa20.84■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Cfdp1O88271 295 aaKnown RBP20.83■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Kif20aP97329 887 aa20.83■□□□□ 0.93
Pcf11-201ENSMUST00000119954 Stk11ipQ3TAA7 1072 aa20.83■□□□□ 0.93
Pcf11-201ENSMUST00000119954 IkQ9Z1M8 557 aaKnown RBP20.83■□□□□ 0.93
Pcf11-201ENSMUST00000119954 NexnQ7TPW1 607 aa20.83■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Znf526Q8BI66 675 aa20.83■□□□□ 0.92
Pcf11-201ENSMUST00000119954 UacaQ8CGB3 1411 aa20.83■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Sart1Q9Z315 806 aaKnown RBP20.83■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Rnf187Q8BFX1 236 aa20.82■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Q9D9S1 216 aa20.82■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Stk3Q9JI10 497 aa20.82■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Nectin2P32507 530 aa20.82■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Erich4Q3UNU4 136 aa20.82■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Tango6Q8C3S2 1079 aa20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms