RNA–Protein interactions for RNA: ENSMUST00000107473.2

Rara-202, Transcript of Retinoic acid receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Rara, Length 3,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rara-202ENSMUST00000107473 Robo2Q7TPD3 1470 aa21.44■■□□□ 1.02
Rara-202ENSMUST00000107473 Col17a1Q07563 1470 aa21.43■■□□□ 1.02
Rara-202ENSMUST00000107473 PtprtQ99M80 1454 aa21.43■■□□□ 1.02
Rara-202ENSMUST00000107473 Duxf3A0A0N4SV92 674 aa21.43■■□□□ 1.02
Rara-202ENSMUST00000107473 Nectin2P32507 530 aa21.43■■□□□ 1.02
Rara-202ENSMUST00000107473 Xrn1P97789 1719 aaKnown RBP21.43■■□□□ 1.02
Rara-202ENSMUST00000107473 Q9D9H8 365 aa21.42■■□□□ 1.02
Rara-202ENSMUST00000107473 Abca8bQ8K440 1620 aa21.4■■□□□ 1.02
Rara-202ENSMUST00000107473 Abca6Q8K441 1624 aa21.4■■□□□ 1.02
Rara-202ENSMUST00000107473 Ralbp1Q62172 648 aa21.4■■□□□ 1.02
Rara-202ENSMUST00000107473 Pdcd11Q6NS46 1862 aaKnown RBP21.39■■□□□ 1.01
Rara-202ENSMUST00000107473 Cald1E9QA15 768 aaKnown RBP21.38■■□□□ 1.01
Rara-202ENSMUST00000107473 Birc3O08863 600 aa21.38■■□□□ 1.01
Rara-202ENSMUST00000107473 Dusp27Q148W8 1138 aa21.38■■□□□ 1.01
Rara-202ENSMUST00000107473 Tmco5bQ80X59 307 aa21.38■■□□□ 1.01
Rara-202ENSMUST00000107473 Ccdc183A2AJB1 534 aa21.37■■□□□ 1.01
Rara-202ENSMUST00000107473 Aplp1Q03157 653 aa21.37■■□□□ 1.01
Rara-202ENSMUST00000107473 Ipo8Q7TMY7 1010 aa21.37■■□□□ 1.01
Rara-202ENSMUST00000107473 Atf7ipQ7TT18 1306 aa21.37■■□□□ 1.01
Rara-202ENSMUST00000107473 TnikP83510 1323 aa21.37■■□□□ 1.01
Rara-202ENSMUST00000107473 Igf1rQ60751 1373 aa21.35■■□□□ 1.01
Rara-202ENSMUST00000107473 Utp14aQ640M1 767 aaKnown RBP21.35■■□□□ 1.01
Rara-202ENSMUST00000107473 Trim58Q5NCC9 485 aa21.34■■□□□ 1.01
Rara-202ENSMUST00000107473 Cfap65Q3V0B4 1847 aa21.32■■□□□ 1
Rara-202ENSMUST00000107473 Ccdc60Q8C4J0 545 aa21.32■■□□□ 1
Rara-202ENSMUST00000107473 Asxl2Q8BZ32 1370 aa21.31■■□□□ 1
Rara-202ENSMUST00000107473 Mfap1aC0HKD8 439 aaKnown RBP21.31■■□□□ 1
Rara-202ENSMUST00000107473 Mfap1bC0HKD9 439 aaKnown RBP21.31■■□□□ 1
Rara-202ENSMUST00000107473 Ppm1gQ61074 542 aa21.31■■□□□ 1
Rara-202ENSMUST00000107473 Nos1Q9Z0J4 1429 aa21.31■■□□□ 1
Rara-202ENSMUST00000107473 Mapk8ip3Q9ESN9 1337 aa21.3■■□□□ 1
Rara-202ENSMUST00000107473 IbtkQ6ZPR6 1352 aaKnown RBP21.3■■□□□ 1
Rara-202ENSMUST00000107473 Stard8Q8K031 1019 aa21.3■■□□□ 1
Rara-202ENSMUST00000107473 Kdm5aQ3UXZ9 1690 aa21.3■■□□□ 1
Rara-202ENSMUST00000107473 Hecw1Q8K4P8 1604 aa21.3■■□□□ 1
Rara-202ENSMUST00000107473 Zfyve16Q80U44 1528 aa21.29■■□□□ 1
Rara-202ENSMUST00000107473 Nphp4P59240 1425 aa21.29■■□□□ 1
Rara-202ENSMUST00000107473 CenpjQ569L8 1344 aa21.29■■□□□ 1
Rara-202ENSMUST00000107473 Pola1P33609 1465 aa21.28■■□□□ 1
Rara-202ENSMUST00000107473 1700019A02RikA0A087WPV9 146 aa21.28■■□□□ 1
Rara-202ENSMUST00000107473 AnkarA2RT91 1465 aa21.28■■□□□ 1
Rara-202ENSMUST00000107473 Atp2b2Q9R0K7 1198 aa21.28■■□□□ 1
Rara-202ENSMUST00000107473 Myo5cE9Q1F5 1742 aa21.27■■□□□ 1
Rara-202ENSMUST00000107473 NgefQ8CHT1 710 aa21.26■□□□□ 0.99
Rara-202ENSMUST00000107473 Afap1Q80YS6 731 aa21.26■□□□□ 0.99
Rara-202ENSMUST00000107473 Uggt2E9Q4X2 1504 aa21.26■□□□□ 0.99
Rara-202ENSMUST00000107473 Mcm10Q0VBD2 885 aa21.25■□□□□ 0.99
Rara-202ENSMUST00000107473 Scaf11E9PZM7 1456 aaKnown RBP21.25■□□□□ 0.99
Rara-202ENSMUST00000107473 AU019823E9PUQ3 292 aa21.25■□□□□ 0.99
Rara-202ENSMUST00000107473 Abca9Q8K449 1623 aa21.25■□□□□ 0.99
Rara-202ENSMUST00000107473 Znf518aB2RRF6 1478 aaKnown RBP21.24■□□□□ 0.99
Rara-202ENSMUST00000107473 U2surpQ6NV83 1029 aaKnown RBP21.24■□□□□ 0.99
Rara-202ENSMUST00000107473 OvosQ3UU35 1456 aa21.24■□□□□ 0.99
Rara-202ENSMUST00000107473 Pibf1E9Q6K3 756 aa21.23■□□□□ 0.99
Rara-202ENSMUST00000107473 Ccar1Q8CH18 1146 aaKnown RBP21.23■□□□□ 0.99
Rara-202ENSMUST00000107473 Tnpo1Q8BFY9 898 aaKnown RBP21.23■□□□□ 0.99
Rara-202ENSMUST00000107473 Plcd4Q8K3R3 807 aa21.23■□□□□ 0.99
Rara-202ENSMUST00000107473 Gli2Q0VGT2 1544 aa21.23■□□□□ 0.99
Rara-202ENSMUST00000107473 Map4k4P97820 1233 aaKnown RBP21.23■□□□□ 0.99
Rara-202ENSMUST00000107473 Cdk19Q8BWD8 501 aa21.23■□□□□ 0.99
Rara-202ENSMUST00000107473 Gtf3c3Q3TMP1 882 aa21.22■□□□□ 0.99
Rara-202ENSMUST00000107473 Maco1Q7TQE6 664 aaKnown RBP21.21■□□□□ 0.99
Rara-202ENSMUST00000107473 Neurl4Q5NCX5 1563 aa21.21■□□□□ 0.99
Rara-202ENSMUST00000107473 Iqgap3F8VQ29 1632 aa21.21■□□□□ 0.99
Rara-202ENSMUST00000107473 Rbm25B2RY56 838 aaKnown RBP21.21■□□□□ 0.99
Rara-202ENSMUST00000107473 Slc12a5Q91V14 1138 aa21.21■□□□□ 0.99
Rara-202ENSMUST00000107473 PalmQ9Z0P4 383 aa21.21■□□□□ 0.99
Rara-202ENSMUST00000107473 Ttc41Q692V3 1318 aa21.21■□□□□ 0.99
Rara-202ENSMUST00000107473 Irx3P81067 507 aa21.21■□□□□ 0.99
Rara-202ENSMUST00000107473 Lrrc7Q80TE7 1490 aa21.21■□□□□ 0.99
Rara-202ENSMUST00000107473 Ppp1r18Q8BQ30 594 aa21.2■□□□□ 0.98
Rara-202ENSMUST00000107473 Vsig10D3YX43 558 aa21.2■□□□□ 0.98
Rara-202ENSMUST00000107473 Itsn2Q9Z0R6 1659 aa21.2■□□□□ 0.98
Rara-202ENSMUST00000107473 Prex1Q69ZK0 1650 aa21.2■□□□□ 0.98
Rara-202ENSMUST00000107473 Abca17E9PX95 1733 aa21.19■□□□□ 0.98
Rara-202ENSMUST00000107473 Mre11Q61216 706 aa21.19■□□□□ 0.98
Rara-202ENSMUST00000107473 NinlQ6ZQ12 1394 aa21.18■□□□□ 0.98
Rara-202ENSMUST00000107473 Pabpn1Q8CCS6 302 aaKnown RBP21.17■□□□□ 0.98
Rara-202ENSMUST00000107473 Rims1Q99NE5 1463 aa21.16■□□□□ 0.98
Rara-202ENSMUST00000107473 Ppp2r3aB2RXC8 1150 aa21.16■□□□□ 0.98
Rara-202ENSMUST00000107473 Gsto1O09131 240 aa21.16■□□□□ 0.98
Rara-202ENSMUST00000107473 GorabQ8BRM2 368 aa21.16■□□□□ 0.98
Rara-202ENSMUST00000107473 Cdk5rap2Q8K389 1822 aa21.16■□□□□ 0.98
Rara-202ENSMUST00000107473 Fndc1E9Q043 1732 aa21.16■□□□□ 0.98
Rara-202ENSMUST00000107473 Yeats2Q3TUF7 1407 aa21.15■□□□□ 0.98
Rara-202ENSMUST00000107473 Klhdc4Q921I2 584 aa21.15■□□□□ 0.98
Rara-202ENSMUST00000107473 Stk11ipQ3TAA7 1072 aa21.15■□□□□ 0.98
Rara-202ENSMUST00000107473 PalldQ9ET54 1408 aa21.14■□□□□ 0.98
Rara-202ENSMUST00000107473 Efcab6Q6P1E8 1516 aa21.14■□□□□ 0.97
Rara-202ENSMUST00000107473 Q4VA45 678 aa21.13■□□□□ 0.97
Rara-202ENSMUST00000107473 Gm156Q58A37 223 aa21.13■□□□□ 0.97
Rara-202ENSMUST00000107473 Gprasp1Q5U4C1 1347 aa21.13■□□□□ 0.97
Rara-202ENSMUST00000107473 Clasp1Q80TV8 1535 aaKnown RBP21.12■□□□□ 0.97
Rara-202ENSMUST00000107473 G3bp1P97855 465 aaKnown RBP21.12■□□□□ 0.97
Rara-202ENSMUST00000107473 Ppp1r9bQ6R891 817 aaKnown RBP21.12■□□□□ 0.97
Rara-202ENSMUST00000107473 Cog6Q8R3I3 657 aa21.12■□□□□ 0.97
Rara-202ENSMUST00000107473 Irx6Q9ER75 438 aa21.12■□□□□ 0.97
Rara-202ENSMUST00000107473 Myom1Q62234 1667 aaKnown RBP21.11■□□□□ 0.97
Rara-202ENSMUST00000107473 Rfx1P48377 963 aa21.11■□□□□ 0.97
Rara-202ENSMUST00000107473 CastP51125 788 aa21.11■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms