RNA–Protein interactions for RNA: ENSMUST00000102823.9

Ttc39b-203, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ttc39b, Length 8,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-203ENSMUST00000102823 Tpm3-rs7D3Z2H9 248 aa11.73□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 Gm10471E9Q1C7 252 aa11.72□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 Eif3aP23116 1344 aaKnown RBP11.72□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 Fbln2P37889 1221 aa11.72□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 UvssaQ9D479 717 aa11.72□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 Kdm3bQ6ZPY7 1562 aa11.71□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 Adgrl3Q80TS3 1537 aa11.71□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 Q3UJC8 639 aa11.71□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 Zranb3Q6NZP1 1069 aa11.71□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 4930572O03RikQ8C5Y0 211 aa11.71□□□□□ -0.53
Ttc39b-203ENSMUST00000102823 Sos1Q62245 1319 aa11.71□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Abcc2Q8VI47 1543 aa11.71□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Brpf1B2RRD7 1212 aa11.71□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Dennd6aQ8BH65 605 aa11.71□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 HnrnpmQ9D0E1 729 aaKnown RBP11.71□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Smg7Q5RJH6 1138 aaKnown RBP11.7□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Camsap2Q8C1B1 1461 aa11.7□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Mast1Q9R1L5 1570 aa11.7□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Hap1O35668 628 aa11.7□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Adam1bQ8R534 806 aa11.7□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 TefQ9JLC6 301 aa11.7□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Plch2A2AP18 1501 aa11.7□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 NpatQ8BMA5 1420 aa11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Clstn1Q9EPL2 979 aa11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 PhaxQ9JJT9 385 aaKnown RBP11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Atl3Q91YH5 541 aa11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 PtprgQ05909 1442 aa11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Arhgef11Q68FM7 1552 aa11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Eif3bQ8JZQ9 803 aaKnown RBP11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Lmtk2Q3TYD6 1471 aa11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Anapc15P60007 132 aa11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Armcx1Q9CX83 456 aa11.69□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 PtmaP26350 111 aa11.68□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Cers3Q1A3B0 383 aa11.68□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Usp16Q99LG0 825 aa11.68□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Znf330Q922H9 316 aa11.68□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Plcb2A3KGF7 1181 aa11.68□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Slc4a10Q5DTL9 1118 aa11.68□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Ccdc30Q8BVF4 654 aa11.68□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Ppip5k1A2ARP1 1436 aa11.68□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Sv2bQ8BG39 683 aa11.68□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Cplx2P84086 134 aa11.67□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Erc2Q6PH08 957 aa11.67□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Ppm1fQ8CGA0 452 aa11.67□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 AppP12023 770 aa11.67□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Naip6Q9JIB6 1403 aa11.67□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Scaf1Q5U4C3 1256 aaKnown RBP11.67□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Dnai1Q8C0M8 701 aa11.67□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Cetn4Q8K4K1 168 aa11.67□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Esx1O88933 382 aa11.66□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Lrrc9Q8CDN9 1456 aa11.66□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Naip7Q9JIB3 1402 aa11.66□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Map3k4O08648 1597 aa11.66□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Hoxb7P09024 217 aa11.66□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Rnf20Q5DTM8 973 aa11.66□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Ipo8Q7TMY7 1010 aa11.66□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Stard3nlQ9DCI3 235 aa11.66□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 B4galnt3Q6L8S8 986 aa11.65□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Hecw1Q8K4P8 1604 aa11.65□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Evc2Q8K1G2 1220 aa11.65□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Slc5a4bQ91ZP4 660 aa11.65□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Rnf17Q99MV7 1640 aa11.65□□□□□ -0.54
Ttc39b-203ENSMUST00000102823 Setd1bQ8CFT2 1985 aa11.65□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Kif14L0N7N1 1674 aaKnown RBP11.65□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Trappc8E9PWG2 1437 aa11.65□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Mcm2P97310 904 aa11.64□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Ppp2r1aQ76MZ3 589 aa11.64□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Cald1E9QA15 768 aaKnown RBP11.64□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Prl7d1P04769 244 aa11.64□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Znf518aB2RRF6 1478 aaKnown RBP11.64□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Tom1O88746 492 aa11.64□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Flad1Q8R123 492 aa11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Glipr1l2Q9CQ35 332 aa11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Q8C5K5 320 aa11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Cluap1Q8R3P7 413 aa11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Elp1Q7TT37 1333 aaKnown RBP11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 TimelessQ9R1X4 1197 aa11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Rpgrip1lQ8CG73 1264 aa11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 OptnQ8K3K8 584 aa11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Mfap1aC0HKD8 439 aaKnown RBP11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Mfap1bC0HKD9 439 aaKnown RBP11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Ddx54Q8K4L0 874 aaKnown RBP11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Supt16hQ920B9 1047 aa11.63□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Washc2Q6PGL7 1334 aa11.62□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Eva1cP58659 440 aa11.62□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 InsrP15208 1372 aa11.62□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Kif16bB1AVY7 1312 aa11.62□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Idi2Q8BFZ6 227 aa11.62□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Dbr1Q923B1 550 aa11.62□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Rbm25B2RY56 838 aaKnown RBP11.62□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Filip1lQ6P6L0 1131 aa11.62□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Ric3Q8BPM6 367 aa11.62□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Cep170Q6A065 1588 aa11.61□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Gimap5Q8BWF2 308 aa11.61□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Cdc42bpaQ3UU96 1719 aa11.61□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Efcab6Q6P1E8 1516 aa11.61□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Pde4dQ01063 747 aa11.61□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 St18Q80TY4 1045 aa11.61□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Ssh2Q5SW75 1423 aa11.6□□□□□ -0.55
Ttc39b-203ENSMUST00000102823 Cfdp1O88271 295 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 110.6 ms