RNA–Protein interactions for RNA: ENSMUST00000102823.9

Ttc39b-203, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ttc39b, Length 8,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-203ENSMUST00000102823 Rhox8Q6VSS7 320 aa17.04■□□□□ 0.32
Ttc39b-203ENSMUST00000102823 NischQ80TM9 1593 aa16.37■□□□□ 0.21
Ttc39b-203ENSMUST00000102823 Rtl1Q7M732 1744 aa15.4■□□□□ 0.06
Ttc39b-203ENSMUST00000102823 Abcc9P70170 1546 aa15.36■□□□□ 0.05
Ttc39b-203ENSMUST00000102823 Trim41Q5NCC3 630 aa15.35■□□□□ 0.05
Ttc39b-203ENSMUST00000102823 Esf1Q3V1V3 845 aaKnown RBP15.33■□□□□ 0.04
Ttc39b-203ENSMUST00000102823 Ccdc136Q3TVA9 1136 aa15.19■□□□□ 0.02
Ttc39b-203ENSMUST00000102823 Gm35339A0A140LHH9 1649 aa15.17■□□□□ 0.02
Ttc39b-203ENSMUST00000102823 Cngb1E1AZ71 1325 aa15.06■□□□□ 0
Ttc39b-203ENSMUST00000102823 Abcc8B2RUS7 1588 aa15.04■□□□□ -0
Ttc39b-203ENSMUST00000102823 Rpgrip1Q9EPQ2 1331 aa15.02■□□□□ -0
Ttc39b-203ENSMUST00000102823 Ccdc180J3QNE4 1664 aa15□□□□□ -0.01
Ttc39b-203ENSMUST00000102823 Zeb1Q64318 1117 aa14.85□□□□□ -0.03
Ttc39b-203ENSMUST00000102823 Npm2Q80W85 207 aa14.79□□□□□ -0.04
Ttc39b-203ENSMUST00000102823 Zcchc6Q5BLK4 1491 aaKnown RBP14.74□□□□□ -0.05
Ttc39b-203ENSMUST00000102823 Gab3Q8BSM5 595 aa14.51□□□□□ -0.09
Ttc39b-203ENSMUST00000102823 Ube2uB1AUC4 352 aa14.49□□□□□ -0.09
Ttc39b-203ENSMUST00000102823 HrcG5E8J6 738 aa14.47□□□□□ -0.09
Ttc39b-203ENSMUST00000102823 Myt1lP97500 1187 aa14.46□□□□□ -0.09
Ttc39b-203ENSMUST00000102823 Las1lA2BE28 776 aaKnown RBP14.44□□□□□ -0.1
Ttc39b-203ENSMUST00000102823 Rb1cc1Q9ESK9 1588 aa14.44□□□□□ -0.1
Ttc39b-203ENSMUST00000102823 NacadQ5SWP3 1504 aa14.41□□□□□ -0.1
Ttc39b-203ENSMUST00000102823 Brd4Q9ESU6 1400 aaKnown RBP14.33□□□□□ -0.12
Ttc39b-203ENSMUST00000102823 Il27Q8K3I6 234 aa14.28□□□□□ -0.12
Ttc39b-203ENSMUST00000102823 Ehmt2Q9Z148 1263 aaKnown RBP14.2□□□□□ -0.14
Ttc39b-203ENSMUST00000102823 Npm1Q61937 292 aaKnown RBP14.18□□□□□ -0.14
Ttc39b-203ENSMUST00000102823 Dcaf1Q80TR8 1506 aa14.18□□□□□ -0.14
Ttc39b-203ENSMUST00000102823 Baz1aO88379 1555 aa14.13□□□□□ -0.15
Ttc39b-203ENSMUST00000102823 NefmP08553 848 aa14.12□□□□□ -0.15
Ttc39b-203ENSMUST00000102823 Wdr66E9Q743 1299 aa14.02□□□□□ -0.17
Ttc39b-203ENSMUST00000102823 Kdm5dQ62240 1548 aa13.99□□□□□ -0.17
Ttc39b-203ENSMUST00000102823 UbtfP25976 765 aaKnown RBP13.95□□□□□ -0.18
Ttc39b-203ENSMUST00000102823 Stra8P70278 393 aa13.91□□□□□ -0.18
Ttc39b-203ENSMUST00000102823 Ercc6F8VPZ5 1481 aa13.91□□□□□ -0.18
Ttc39b-203ENSMUST00000102823 Ubl4bQ9CQ84 188 aa13.83□□□□□ -0.2
Ttc39b-203ENSMUST00000102823 Acin1Q9JIX8 1338 aaKnown RBP13.83□□□□□ -0.2
Ttc39b-203ENSMUST00000102823 NclP09405 707 aaKnown RBP13.79□□□□□ -0.2
Ttc39b-203ENSMUST00000102823 Crybg2B7ZCC2 1516 aa13.78□□□□□ -0.2
Ttc39b-203ENSMUST00000102823 Pds5bQ4VA53 1446 aaKnown RBP13.77□□□□□ -0.21
Ttc39b-203ENSMUST00000102823 Fam50aQ9WV03 339 aaKnown RBP13.76□□□□□ -0.21
Ttc39b-203ENSMUST00000102823 Pelp1Q9DBD5 1123 aaKnown RBP13.76□□□□□ -0.21
Ttc39b-203ENSMUST00000102823 Rsf1E9PWW9 1441 aaKnown RBP13.76□□□□□ -0.21
Ttc39b-203ENSMUST00000102823 Cep164Q5DU05 1446 aa13.75□□□□□ -0.21
Ttc39b-203ENSMUST00000102823 Anp32bQ9EST5 272 aaKnown RBP13.75□□□□□ -0.21
Ttc39b-203ENSMUST00000102823 Hdac5Q9Z2V6 1113 aa13.74□□□□□ -0.21
Ttc39b-203ENSMUST00000102823 Ccdc18Q640L5 1455 aa13.72□□□□□ -0.21
Ttc39b-203ENSMUST00000102823 Sycp2Q9CUU3 1500 aa13.69□□□□□ -0.22
Ttc39b-203ENSMUST00000102823 ScribQ80U72 1612 aa13.64□□□□□ -0.23
Ttc39b-203ENSMUST00000102823 Ap3b1Q9Z1T1 1105 aa13.63□□□□□ -0.23
Ttc39b-203ENSMUST00000102823 Golga3P55937 1487 aa13.61□□□□□ -0.23
Ttc39b-203ENSMUST00000102823 Kif15Q6P9L6 1387 aa13.59□□□□□ -0.23
Ttc39b-203ENSMUST00000102823 Cdk11bP24788 784 aaKnown RBP13.55□□□□□ -0.24
Ttc39b-203ENSMUST00000102823 Os9Q8K2C7 672 aa13.55□□□□□ -0.24
Ttc39b-203ENSMUST00000102823 Clip1Q922J3 1391 aa13.5□□□□□ -0.25
Ttc39b-203ENSMUST00000102823 Ccer2J3QPU5 274 aa13.48□□□□□ -0.25
Ttc39b-203ENSMUST00000102823 Smarca2Q6DIC0 1577 aa13.46□□□□□ -0.26
Ttc39b-203ENSMUST00000102823 Gm13697A2AK42 830 aa13.44□□□□□ -0.26
Ttc39b-203ENSMUST00000102823 NrdcQ8BHG1 1161 aa13.44□□□□□ -0.26
Ttc39b-203ENSMUST00000102823 Smarca4Q3TKT4 1613 aaKnown RBP13.43□□□□□ -0.26
Ttc39b-203ENSMUST00000102823 Atad2bE9Q166 1460 aaKnown RBP13.42□□□□□ -0.26
Ttc39b-203ENSMUST00000102823 TonslQ6NZL6 1363 aa13.41□□□□□ -0.26
Ttc39b-203ENSMUST00000102823 Cttnbp2B9EJA2 1648 aa13.41□□□□□ -0.26
Ttc39b-203ENSMUST00000102823 Lmod2Q3UHZ5 550 aa13.4□□□□□ -0.26
Ttc39b-203ENSMUST00000102823 Hnrnpul2Q00PI9 745 aaKnown RBP13.39□□□□□ -0.27
Ttc39b-203ENSMUST00000102823 Clstn2Q9ER65 966 aa13.37□□□□□ -0.27
Ttc39b-203ENSMUST00000102823 Plekhg3Q4VAC9 1341 aa13.37□□□□□ -0.27
Ttc39b-203ENSMUST00000102823 Ttbk1Q6PCN3 1308 aa13.36□□□□□ -0.27
Ttc39b-203ENSMUST00000102823 Neurod1Q60867 357 aa13.35□□□□□ -0.27
Ttc39b-203ENSMUST00000102823 Fmn1Q05860 1466 aa13.35□□□□□ -0.27
Ttc39b-203ENSMUST00000102823 Chic1Q8CBW7 227 aa13.33□□□□□ -0.28
Ttc39b-203ENSMUST00000102823 Slc24a1Q91WD8 1130 aa13.31□□□□□ -0.28
Ttc39b-203ENSMUST00000102823 Phldb1Q6PDH0 1371 aaKnown RBP13.31□□□□□ -0.28
Ttc39b-203ENSMUST00000102823 Setd5Q5XJV7 1441 aa13.31□□□□□ -0.28
Ttc39b-203ENSMUST00000102823 Eea1Q8BL66 1411 aa13.3□□□□□ -0.28
Ttc39b-203ENSMUST00000102823 Ifnlr1Q8CGK5 535 aa13.3□□□□□ -0.28
Ttc39b-203ENSMUST00000102823 NeflP08551 543 aa13.27□□□□□ -0.28
Ttc39b-203ENSMUST00000102823 BlmO88700 1416 aa13.27□□□□□ -0.29
Ttc39b-203ENSMUST00000102823 CftrP26361 1476 aa13.27□□□□□ -0.29
Ttc39b-203ENSMUST00000102823 Tnnt3Q9QZ47 272 aa13.24□□□□□ -0.29
Ttc39b-203ENSMUST00000102823 Mier1Q5UAK0 511 aa13.22□□□□□ -0.29
Ttc39b-203ENSMUST00000102823 Gm13695A2AK44 830 aa13.22□□□□□ -0.29
Ttc39b-203ENSMUST00000102823 Fkbp15Q6P9Q6 1216 aaKnown RBP13.22□□□□□ -0.29
Ttc39b-203ENSMUST00000102823 Iqgap2Q3UQ44 1575 aa13.19□□□□□ -0.3
Ttc39b-203ENSMUST00000102823 Zbtb7cQ8VCZ7 619 aa13.18□□□□□ -0.3
Ttc39b-203ENSMUST00000102823 Erich6D3Z6S9 713 aa13.15□□□□□ -0.3
Ttc39b-203ENSMUST00000102823 Synj1Q8CHC4 1574 aa13.14□□□□□ -0.31
Ttc39b-203ENSMUST00000102823 Cux2P70298 1426 aa13.13□□□□□ -0.31
Ttc39b-203ENSMUST00000102823 Atp1b4Q99ME6 356 aa13.12□□□□□ -0.31
Ttc39b-203ENSMUST00000102823 Safb2Q80YR5 991 aaKnown RBP13.11□□□□□ -0.31
Ttc39b-203ENSMUST00000102823 CenpbP27790 599 aa13.1□□□□□ -0.31
Ttc39b-203ENSMUST00000102823 Nop58Q6DFW4 536 aaKnown RBP13.08□□□□□ -0.32
Ttc39b-203ENSMUST00000102823 ClspnQ80YR7 1315 aa13.06□□□□□ -0.32
Ttc39b-203ENSMUST00000102823 Polr1aO35134 1717 aaKnown RBP13.06□□□□□ -0.32
Ttc39b-203ENSMUST00000102823 Arhgap27A2AB59 869 aa13.05□□□□□ -0.32
Ttc39b-203ENSMUST00000102823 Mia2Q91ZV0 1396 aa13.04□□□□□ -0.32
Ttc39b-203ENSMUST00000102823 Mtus2Q3UHD3 1353 aa13.04□□□□□ -0.32
Ttc39b-203ENSMUST00000102823 Cecr2E9Q2Z1 1453 aa13.03□□□□□ -0.32
Ttc39b-203ENSMUST00000102823 LrpprcQ6PB66 1392 aaKnown RBP13□□□□□ -0.33
Ttc39b-203ENSMUST00000102823 Baz1bQ9Z277 1479 aa12.99□□□□□ -0.33
Ttc39b-203ENSMUST00000102823 Cep162Q6ZQ06 1403 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 105.1 ms