RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Top2aQ01320 1528 aaKnown RBP17.58■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Gcc1Q9D4H2 778 aa17.57■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Ppp2r1aQ76MZ3 589 aa17.57■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Slc4a10Q5DTL9 1118 aa17.57■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Dnaaf4Q8R368 420 aa17.57■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Med4Q9CQA5 270 aa17.57■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Gnai1B2RSH2 354 aa17.57■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Cplx2P84086 134 aa17.57■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Chmp4cQ9D7F7 232 aa17.57■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Gnai3Q9DC51 354 aa17.57■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Naip1Q9QWK5 1403 aa17.56■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Ppm1eQ80TL0 749 aa17.56■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Nol10Q5RJG1 687 aaKnown RBP17.56■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 SrrtQ99MR6 875 aaKnown RBP17.56■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Dctn1O08788 1281 aa17.55■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Fan1Q69ZT1 1020 aa17.55■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Spag5Q7TME2 1165 aa17.55■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Hoxa7P02830 229 aa17.55■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Ccdc83Q9D4V3 305 aa17.55■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Zkscan2G3X952 960 aa17.55■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 PhaxQ9JJT9 385 aaKnown RBP17.55■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Kif18aQ91WD7 886 aa17.55■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Atad2bE9Q166 1460 aaKnown RBP17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Ric3Q8BPM6 367 aa17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Ift140E9PY46 1464 aa17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Tnnt1O88346 262 aa17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 NexnQ7TPW1 607 aa17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Arhgef5E9Q7D5 1581 aa17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Rbm25B2RY56 838 aaKnown RBP17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Trap1aP19473 224 aa17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Tceal9Q9DD24 104 aa17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Psma5Q9Z2U1 241 aaKnown RBP17.54■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Hvcn1Q3U2S8 269 aa17.53■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Cc2d2aQ8CFW7 1633 aa17.53■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Erc2Q6PH08 957 aa17.53■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Usp40Q8BWR4 1235 aa17.53■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Hs1bp3Q3TC93 395 aa17.52■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 OptnQ8K3K8 584 aa17.52■□□□□ 0.4
Pcdha1-201ENSMUST00000070797 Ggt6Q6PDE7 497 aa17.52■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Mical1Q8VDP3 1048 aa17.52■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Hmox1P14901 289 aa17.52■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Ccdc102aQ3TMW1 549 aa17.52■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Swt1Q9DBQ9 907 aa17.52■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Rcan3Q9JKK0 239 aa17.52■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Gm21969J3QJZ1 289 aa17.51■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Rab11fip3Q8CHD8 1047 aa17.51■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Kank1E9Q238 1360 aa17.51■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Cog6Q8R3I3 657 aa17.51■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Nat10Q8K224 1024 aaKnown RBP17.5■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Hnrnpul1Q8VDM6 859 aaKnown RBP17.5■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Pmfbp1Q9WVQ0 1022 aa17.5■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Pibf1E9Q6K3 756 aa17.49■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Fmnl2A2APV2 1086 aa17.49■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Syce3B5KM66 88 aa17.49■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Cavin1O54724 392 aa17.49■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Ift57Q8BXG3 429 aa17.49■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Usp48Q3V0C5 1052 aa17.49■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 TnmdQ9EP64 317 aa17.49■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Myom3A2ABU4 1439 aa17.49■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Arap1Q4LDD4 1452 aa17.48■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Cplx1P63040 134 aa17.48■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Cep112Q5PR68 954 aa17.48■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Nol12Q8BG17 217 aa17.48■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Map9Q3TRR0 646 aa17.48■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Cfap99A0A140LIX9 648 aa17.47■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Rsph4aQ8BYM7 716 aa17.47■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Wdr78E9PYY5 807 aa17.47■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Tubb6Q922F4 447 aa17.47■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Senp3Q9EP97 568 aaKnown RBP17.47■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Jakmip2D3YXK0 820 aa17.47■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Tiam1Q60610 1591 aa17.47■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Gm45140A0A0N4SUM8 220 aa17.46■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Psme1P97371 249 aa17.46■□□□□ 0.39
Pcdha1-201ENSMUST00000070797 Usp16Q99LG0 825 aa17.45■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Pabpn1Q8CCS6 302 aaKnown RBP17.45■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Polr1aO35134 1717 aaKnown RBP17.45■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Bag1Q60739 355 aa17.44■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Shroom4Q1W617 1475 aa17.44■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Nup88Q8CEC0 753 aaKnown RBP17.44■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Ccdc94Q9D6J3 314 aa17.44■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Chmp3Q9CQ10 224 aa17.44■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Cc2d1aQ8K1A6 943 aa17.43■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Map3k1P53349 1493 aa17.43■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Terf2O35144 541 aa17.43■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Vgll3P85442 326 aa17.43■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Txndc2Q6P902 515 aa17.43■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 NefhP19246 1090 aa17.42■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Anapc15-psA0A140T8L6 141 aa17.42■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Ncoa1P70365 1447 aa17.42■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Phldb2Q8K1N2 1249 aa17.42■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 MicalclQ9D5U9 680 aa17.42■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Ecm2Q5FW85 670 aa17.42■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Wwc1Q5SXA9 1104 aa17.41■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Sass6Q80UK7 654 aa17.41■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Cavin4A2AMM0 362 aa17.41■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Nsd2Q8BVE8 1365 aa17.41■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Krt85Q9Z2T6 507 aa17.41■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Sart1Q9Z315 806 aaKnown RBP17.41■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Iqgap2Q3UQ44 1575 aa17.41■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Camsap2Q8C1B1 1461 aa17.41■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms