RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Tmf1B9EKI3 1091 aa31.21■■■□□ 2.59
Upf3a-201ENSMUST00000043767 Plekhg1F6S200 1446 aa31.21■■■□□ 2.59
Upf3a-201ENSMUST00000043767 PzpQ61838 1495 aa31.21■■■□□ 2.59
Upf3a-201ENSMUST00000043767 Cnga1P29974 684 aa31.2■■■□□ 2.58
Upf3a-201ENSMUST00000043767 Atp2b2Q9R0K7 1198 aa31.19■■■□□ 2.58
Upf3a-201ENSMUST00000043767 Fam184bQ0KK56 942 aa31.18■■■□□ 2.58
Upf3a-201ENSMUST00000043767 Abca14E9Q8F8 1683 aa31.17■■■□□ 2.58
Upf3a-201ENSMUST00000043767 InsrP15208 1372 aa31.17■■■□□ 2.58
Upf3a-201ENSMUST00000043767 Gm16486A0A1D5RMD1 1434 aa31.15■■■□□ 2.58
Upf3a-201ENSMUST00000043767 HnrnpmQ9D0E1 729 aaKnown RBP31.15■■■□□ 2.58
Upf3a-201ENSMUST00000043767 Scaf11E9PZM7 1456 aaKnown RBP31.15■■■□□ 2.58
Upf3a-201ENSMUST00000043767 Zscan10Q3URR7 782 aa31.14■■■□□ 2.58
Upf3a-201ENSMUST00000043767 Wwc2Q6NXJ0 1187 aa31.14■■■□□ 2.58
Upf3a-201ENSMUST00000043767 Zranb1Q7M760 708 aa31.14■■■□□ 2.58
Upf3a-201ENSMUST00000043767 Exoc6Q8R313 802 aa31.1■■■□□ 2.57
Upf3a-201ENSMUST00000043767 Nwd1A6H603 1563 aa31.1■■■□□ 2.57
Upf3a-201ENSMUST00000043767 Rimbp3Q3V0F0 1606 aa31.09■■■□□ 2.57
Upf3a-201ENSMUST00000043767 Cps1Q8C196 1500 aa31.09■■■□□ 2.57
Upf3a-201ENSMUST00000043767 Pik3r4Q8VD65 1358 aa31.09■■■□□ 2.57
Upf3a-201ENSMUST00000043767 Lmtk3Q5XJV6 1424 aa31.07■■■□□ 2.56
Upf3a-201ENSMUST00000043767 Cdk19Q8BWD8 501 aa31.07■■■□□ 2.56
Upf3a-201ENSMUST00000043767 Brwd3A2AHJ4 1799 aa31.06■■■□□ 2.56
Upf3a-201ENSMUST00000043767 Arap3Q8R5G7 1538 aa31.05■■■□□ 2.56
Upf3a-201ENSMUST00000043767 Exosc9Q9JHI7 438 aaKnown RBP31.05■■■□□ 2.56
Upf3a-201ENSMUST00000043767 NktrP30415 1453 aa31.05■■■□□ 2.56
Upf3a-201ENSMUST00000043767 Rims2Q9EQZ7 1530 aa31.04■■■□□ 2.56
Upf3a-201ENSMUST00000043767 Stra8P70278 393 aa31.04■■■□□ 2.56
Upf3a-201ENSMUST00000043767 Gsto1O09131 240 aa31.01■■■□□ 2.56
Upf3a-201ENSMUST00000043767 Mrs2Q5NCE8 434 aa31.01■■■□□ 2.55
Upf3a-201ENSMUST00000043767 Prdm10Q3UTQ7 1184 aa30.99■■■□□ 2.55
Upf3a-201ENSMUST00000043767 Usp32F8VPZ3 1604 aa30.99■■■□□ 2.55
Upf3a-201ENSMUST00000043767 Dcaf11Q91VU6 549 aa30.94■■■□□ 2.54
Upf3a-201ENSMUST00000043767 Phlpp1Q8CHE4 1687 aa30.92■■■□□ 2.54
Upf3a-201ENSMUST00000043767 Q3UJC8 639 aa30.91■■■□□ 2.54
Upf3a-201ENSMUST00000043767 Pik3c2bE9QAN8 1632 aa30.9■■■□□ 2.54
Upf3a-201ENSMUST00000043767 PnisrA2AJT4 805 aaKnown RBP30.9■■■□□ 2.54
Upf3a-201ENSMUST00000043767 Gm38655A0A286YDK6 273 aa30.89■■■□□ 2.54
Upf3a-201ENSMUST00000043767 Slc4a2P13808 1237 aaKnown RBP30.89■■■□□ 2.54
Upf3a-201ENSMUST00000043767 Znf710Q3U288 666 aa30.89■■■□□ 2.54
Upf3a-201ENSMUST00000043767 Kif7B7ZNG0 1348 aa30.89■■■□□ 2.54
Upf3a-201ENSMUST00000043767 Med1Q925J9 1575 aa30.88■■■□□ 2.53
Upf3a-201ENSMUST00000043767 Scn4aQ9ER60 1841 aa30.88■■■□□ 2.53
Upf3a-201ENSMUST00000043767 Znf316Q6PGE4 1016 aa30.88■■■□□ 2.53
Upf3a-201ENSMUST00000043767 FanciQ8K368 1330 aa30.85■■■□□ 2.53
Upf3a-201ENSMUST00000043767 Rpgrip1lQ8CG73 1264 aa30.85■■■□□ 2.53
Upf3a-201ENSMUST00000043767 Rreb1Q3UH06 1700 aaKnown RBP30.85■■■□□ 2.53
Upf3a-201ENSMUST00000043767 Thsd7aQ69ZU6 1645 aa30.83■■■□□ 2.53
Upf3a-201ENSMUST00000043767 Map3k19E9Q3S4 1311 aa30.83■■■□□ 2.53
Upf3a-201ENSMUST00000043767 Gprasp1Q5U4C1 1347 aa30.83■■■□□ 2.53
Upf3a-201ENSMUST00000043767 Nrxn1Q9CS84 1514 aa30.83■■■□□ 2.53
Upf3a-201ENSMUST00000043767 Nrxn3Q6P9K9 1571 aa30.82■■■□□ 2.52
Upf3a-201ENSMUST00000043767 Tmem94Q7TSH8 1360 aa30.82■■■□□ 2.52
Upf3a-201ENSMUST00000043767 Anp32bQ9EST5 272 aaKnown RBP30.81■■■□□ 2.52
Upf3a-201ENSMUST00000043767 Ppp2r1aQ76MZ3 589 aa30.8■■■□□ 2.52
Upf3a-201ENSMUST00000043767 Q7TT23 1179 aa30.8■■■□□ 2.52
Upf3a-201ENSMUST00000043767 Adgrl1Q80TR1 1466 aa30.78■■■□□ 2.52
Upf3a-201ENSMUST00000043767 Pip4k2bQ80XI4 416 aa30.77■■■□□ 2.52
Upf3a-201ENSMUST00000043767 Tns3Q5SSZ5 1440 aa30.77■■■□□ 2.52
Upf3a-201ENSMUST00000043767 Kif20bQ80WE4 1774 aaKnown RBP30.76■■■□□ 2.52
Upf3a-201ENSMUST00000043767 D430041D05RikF6ZGR6 1678 aa30.76■■■□□ 2.52
Upf3a-201ENSMUST00000043767 NinlQ6ZQ12 1394 aa30.76■■■□□ 2.52
Upf3a-201ENSMUST00000043767 NrdcQ8BHG1 1161 aa30.76■■■□□ 2.51
Upf3a-201ENSMUST00000043767 Rab3gap2Q8BMG7 1366 aa30.74■■■□□ 2.51
Upf3a-201ENSMUST00000043767 Gm10563F6WIE4 79 aa30.74■■■□□ 2.51
Upf3a-201ENSMUST00000043767 Idi2Q8BFZ6 227 aa30.73■■■□□ 2.51
Upf3a-201ENSMUST00000043767 Tex14Q7M6U3 1450 aa30.72■■■□□ 2.51
Upf3a-201ENSMUST00000043767 PtpruB1AUH1 1446 aa30.71■■■□□ 2.51
Upf3a-201ENSMUST00000043767 Sirt1Q923E4 737 aa30.7■■■□□ 2.51
Upf3a-201ENSMUST00000043767 Ltbp4Q8K4G1 1666 aa30.69■■■□□ 2.5
Upf3a-201ENSMUST00000043767 Tnrc6bQ8BKI2 1810 aaKnown RBP30.69■■■□□ 2.5
Upf3a-201ENSMUST00000043767 SafbD3YXK2 937 aaKnown RBP30.69■■■□□ 2.5
Upf3a-201ENSMUST00000043767 Rapgef3Q8VCC8 918 aa30.69■■■□□ 2.5
Upf3a-201ENSMUST00000043767 C5P06684 1680 aa30.68■■■□□ 2.5
Upf3a-201ENSMUST00000043767 Idi1P58044 227 aa30.67■■■□□ 2.5
Upf3a-201ENSMUST00000043767 NgefQ8CHT1 710 aa30.67■■■□□ 2.5
Upf3a-201ENSMUST00000043767 KdrP35918 1367 aa30.67■■■□□ 2.5
Upf3a-201ENSMUST00000043767 Als2Q920R0 1651 aa30.66■■■□□ 2.5
Upf3a-201ENSMUST00000043767 Sox12Q04890 314 aa30.66■■■□□ 2.5
Upf3a-201ENSMUST00000043767 NalcnQ8BXR5 1738 aa30.65■■■□□ 2.5
Upf3a-201ENSMUST00000043767 C3P01027 1663 aa30.65■■■□□ 2.5
Upf3a-201ENSMUST00000043767 CatipB9EKE5 520 aa30.63■■■□□ 2.49
Upf3a-201ENSMUST00000043767 Abcc10Q8R4P9 1501 aa30.62■■■□□ 2.49
Upf3a-201ENSMUST00000043767 N4bp2F8VQG7 1678 aaKnown RBP30.62■■■□□ 2.49
Upf3a-201ENSMUST00000043767 Col14a1Q80X19 1797 aa30.61■■■□□ 2.49
Upf3a-201ENSMUST00000043767 Zscan21Q07231 555 aa30.61■■■□□ 2.49
Upf3a-201ENSMUST00000043767 Kif16bB1AVY7 1312 aa30.59■■■□□ 2.49
Upf3a-201ENSMUST00000043767 Cyb5rlB1AS42 316 aa30.58■■■□□ 2.49
Upf3a-201ENSMUST00000043767 Iqsec2Q5DU25 1478 aa30.58■■■□□ 2.49
Upf3a-201ENSMUST00000043767 Slain2Q8CI08 581 aa30.58■■■□□ 2.49
Upf3a-201ENSMUST00000043767 Cald1E9QA15 768 aaKnown RBP30.56■■■□□ 2.48
Upf3a-201ENSMUST00000043767 Nlrp6Q91WS2 869 aa30.56■■■□□ 2.48
Upf3a-201ENSMUST00000043767 Unc13bQ9Z1N9 1602 aa30.55■■■□□ 2.48
Upf3a-201ENSMUST00000043767 Fam71e1A1L3C1 212 aa30.54■■■□□ 2.48
Upf3a-201ENSMUST00000043767 P2rx7Q9Z1M0 595 aa30.53■■■□□ 2.48
Upf3a-201ENSMUST00000043767 Evi5lH3BKQ3 813 aa30.52■■■□□ 2.48
Upf3a-201ENSMUST00000043767 Anp32aO35381 247 aa30.52■■■□□ 2.48
Upf3a-201ENSMUST00000043767 Sipa1l2Q80TE4 1722 aa30.51■■■□□ 2.47
Upf3a-201ENSMUST00000043767 Ap3b2Q9JME5 1082 aa30.5■■■□□ 2.47
Upf3a-201ENSMUST00000043767 Mon2Q80TL7 1715 aa30.48■■■□□ 2.47
Upf3a-201ENSMUST00000043767 IbtkQ6ZPR6 1352 aaKnown RBP30.48■■■□□ 2.47
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms