RNA–Protein interactions for RNA: ENSMUST00000035033.6

Copb2-201, Transcript of Coatomer subunit beta', mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb2, Length 3,050 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2-201ENSMUST00000035033 Mink1Q9JM52 1308 aa17.37■□□□□ 0.37
Copb2-201ENSMUST00000035033 Cep170bQ80U49 1574 aa17.37■□□□□ 0.37
Copb2-201ENSMUST00000035033 Psme1P97371 249 aa17.36■□□□□ 0.37
Copb2-201ENSMUST00000035033 Asxl2Q8BZ32 1370 aa17.36■□□□□ 0.37
Copb2-201ENSMUST00000035033 Exosc9Q9JHI7 438 aaKnown RBP17.35■□□□□ 0.37
Copb2-201ENSMUST00000035033 Mak16Q8BGS0 296 aaKnown RBP17.34■□□□□ 0.37
Copb2-201ENSMUST00000035033 Gprasp1Q5U4C1 1347 aa17.34■□□□□ 0.37
Copb2-201ENSMUST00000035033 Zranb1Q7M760 708 aa17.33■□□□□ 0.37
Copb2-201ENSMUST00000035033 Atp2b2Q9R0K7 1198 aa17.32■□□□□ 0.36
Copb2-201ENSMUST00000035033 Zc3h13E9Q784 1729 aaKnown RBP17.32■□□□□ 0.36
Copb2-201ENSMUST00000035033 Nlrp6Q91WS2 869 aa17.32■□□□□ 0.36
Copb2-201ENSMUST00000035033 SafbD3YXK2 937 aaKnown RBP17.31■□□□□ 0.36
Copb2-201ENSMUST00000035033 Pcdh10E9PXQ7 1057 aa17.31■□□□□ 0.36
Copb2-201ENSMUST00000035033 Calr4Q3TQS0 420 aa17.31■□□□□ 0.36
Copb2-201ENSMUST00000035033 Esx1O88933 382 aa17.3■□□□□ 0.36
Copb2-201ENSMUST00000035033 Eif2ak4Q9QZ05 1648 aa17.29■□□□□ 0.36
Copb2-201ENSMUST00000035033 PplQ9R269 1755 aa17.29■□□□□ 0.36
Copb2-201ENSMUST00000035033 Gm38655A0A286YDK6 273 aa17.28■□□□□ 0.36
Copb2-201ENSMUST00000035033 Gsto1O09131 240 aa17.28■□□□□ 0.36
Copb2-201ENSMUST00000035033 Cdk19Q8BWD8 501 aa17.28■□□□□ 0.36
Copb2-201ENSMUST00000035033 Plekhg1F6S200 1446 aa17.28■□□□□ 0.36
Copb2-201ENSMUST00000035033 Rad21Q61550 635 aaKnown RBP17.27■□□□□ 0.36
Copb2-201ENSMUST00000035033 Atf7ipQ7TT18 1306 aa17.27■□□□□ 0.36
Copb2-201ENSMUST00000035033 Aplp2Q06335 707 aa17.27■□□□□ 0.36
Copb2-201ENSMUST00000035033 Zfp444Q3TDV8 331 aaKnown RBP17.27■□□□□ 0.36
Copb2-201ENSMUST00000035033 1700123L14RikQ3V2K7 440 aa17.27■□□□□ 0.36
Copb2-201ENSMUST00000035033 Dip2aQ8BWT5 1523 aa17.26■□□□□ 0.35
Copb2-201ENSMUST00000035033 IghaA0A0A6YXW6 389 aa17.26■□□□□ 0.35
Copb2-201ENSMUST00000035033 Chd2E9PZM4 1827 aaKnown RBP17.26■□□□□ 0.35
Copb2-201ENSMUST00000035033 Abca14E9Q8F8 1683 aa17.25■□□□□ 0.35
Copb2-201ENSMUST00000035033 Gemin5Q8BX17 1502 aaKnown RBP17.24■□□□□ 0.35
Copb2-201ENSMUST00000035033 KdrP35918 1367 aa17.22■□□□□ 0.35
Copb2-201ENSMUST00000035033 L3mbtl2P59178 703 aa17.22■□□□□ 0.35
Copb2-201ENSMUST00000035033 Dnajc5P60904 198 aa17.21■□□□□ 0.35
Copb2-201ENSMUST00000035033 Nrxn1Q9CS84 1514 aa17.21■□□□□ 0.35
Copb2-201ENSMUST00000035033 Scaf11E9PZM7 1456 aaKnown RBP17.21■□□□□ 0.35
Copb2-201ENSMUST00000035033 NktrP30415 1453 aa17.2■□□□□ 0.34
Copb2-201ENSMUST00000035033 CrbnQ8C7D2 445 aa17.2■□□□□ 0.34
Copb2-201ENSMUST00000035033 Cald1E9QA15 768 aaKnown RBP17.19■□□□□ 0.34
Copb2-201ENSMUST00000035033 FanciQ8K368 1330 aa17.18■□□□□ 0.34
Copb2-201ENSMUST00000035033 MyclP10166 368 aa17.18■□□□□ 0.34
Copb2-201ENSMUST00000035033 Dip2bQ3UH60 1574 aa17.18■□□□□ 0.34
Copb2-201ENSMUST00000035033 Nwd1A6H603 1563 aa17.18■□□□□ 0.34
Copb2-201ENSMUST00000035033 Kiaa1107Q80TK0 1369 aa17.17■□□□□ 0.34
Copb2-201ENSMUST00000035033 HnrnpmQ9D0E1 729 aaKnown RBP17.17■□□□□ 0.34
Copb2-201ENSMUST00000035033 Slit3Q9WVB4 1523 aa17.17■□□□□ 0.34
Copb2-201ENSMUST00000035033 P2rx7Q9Z1M0 595 aa17.17■□□□□ 0.34
Copb2-201ENSMUST00000035033 IbtkQ6ZPR6 1352 aaKnown RBP17.16■□□□□ 0.34
Copb2-201ENSMUST00000035033 NinlQ6ZQ12 1394 aa17.16■□□□□ 0.34
Copb2-201ENSMUST00000035033 Kif16bB1AVY7 1312 aa17.15■□□□□ 0.34
Copb2-201ENSMUST00000035033 PzpQ61838 1495 aa17.15■□□□□ 0.34
Copb2-201ENSMUST00000035033 4930407I10RikD3Z5T8 1512 aa17.15■□□□□ 0.34
Copb2-201ENSMUST00000035033 Golga2Q921M4 999 aa17.15■□□□□ 0.34
Copb2-201ENSMUST00000035033 Adgrl1Q80TR1 1466 aa17.14■□□□□ 0.33
Copb2-201ENSMUST00000035033 Znf316Q6PGE4 1016 aa17.14■□□□□ 0.33
Copb2-201ENSMUST00000035033 Map3k19E9Q3S4 1311 aa17.14■□□□□ 0.33
Copb2-201ENSMUST00000035033 Kank1E9Q238 1360 aa17.14■□□□□ 0.33
Copb2-201ENSMUST00000035033 GsdmaQ9EST1 446 aa17.13■□□□□ 0.33
Copb2-201ENSMUST00000035033 Erbb3Q61526 1339 aa17.13■□□□□ 0.33
Copb2-201ENSMUST00000035033 Usp19Q3UJD6 1360 aa17.12■□□□□ 0.33
Copb2-201ENSMUST00000035033 Speer4f1Q9D5Q6 258 aa17.11■□□□□ 0.33
Copb2-201ENSMUST00000035033 Cps1Q8C196 1500 aa17.1■□□□□ 0.33
Copb2-201ENSMUST00000035033 Upf2A2AT37 1269 aaKnown RBP17.1■□□□□ 0.33
Copb2-201ENSMUST00000035033 Neurod2Q62414 383 aa17.08■□□□□ 0.33
Copb2-201ENSMUST00000035033 GphnQ8BUV3 769 aaKnown RBP17.08■□□□□ 0.33
Copb2-201ENSMUST00000035033 Pik3r4Q8VD65 1358 aa17.08■□□□□ 0.33
Copb2-201ENSMUST00000035033 Idi2Q8BFZ6 227 aa17.07■□□□□ 0.32
Copb2-201ENSMUST00000035033 MlecQ6ZQI3 291 aaKnown RBP17.07■□□□□ 0.32
Copb2-201ENSMUST00000035033 Uspl1Q3ULM6 1089 aa17.07■□□□□ 0.32
Copb2-201ENSMUST00000035033 Tsen2Q6P7W5 460 aa17.07■□□□□ 0.32
Copb2-201ENSMUST00000035033 Map4k4P97820 1233 aaKnown RBP17.06■□□□□ 0.32
Copb2-201ENSMUST00000035033 Usp32F8VPZ3 1604 aa17.06■□□□□ 0.32
Copb2-201ENSMUST00000035033 U2af1Q9D883 239 aaKnown RBP17.06■□□□□ 0.32
Copb2-201ENSMUST00000035033 Bcl9Q9D219 1425 aa17.05■□□□□ 0.32
Copb2-201ENSMUST00000035033 Q3UJC8 639 aa17.05■□□□□ 0.32
Copb2-201ENSMUST00000035033 Pik3c2bE9QAN8 1632 aa17.05■□□□□ 0.32
Copb2-201ENSMUST00000035033 Tcerg1Q8CGF7 1100 aaKnown RBP17.04■□□□□ 0.32
Copb2-201ENSMUST00000035033 Ccdc30Q8BVF4 654 aa17.03■□□□□ 0.32
Copb2-201ENSMUST00000035033 PtpruB1AUH1 1446 aa17.03■□□□□ 0.32
Copb2-201ENSMUST00000035033 Arap3Q8R5G7 1538 aa17.03■□□□□ 0.32
Copb2-201ENSMUST00000035033 CenpbP27790 599 aa17.01■□□□□ 0.31
Copb2-201ENSMUST00000035033 CatipB9EKE5 520 aa17.01■□□□□ 0.31
Copb2-201ENSMUST00000035033 Apaf1O88879 1249 aa17■□□□□ 0.31
Copb2-201ENSMUST00000035033 Birc3O08863 600 aa17■□□□□ 0.31
Copb2-201ENSMUST00000035033 Ralbp1Q62172 648 aa17■□□□□ 0.31
Copb2-201ENSMUST00000035033 NgefQ8CHT1 710 aa16.99■□□□□ 0.31
Copb2-201ENSMUST00000035033 Rreb1Q3UH06 1700 aaKnown RBP16.99■□□□□ 0.31
Copb2-201ENSMUST00000035033 Sirt1Q923E4 737 aa16.99■□□□□ 0.31
Copb2-201ENSMUST00000035033 Ttc41Q692V3 1318 aa16.98■□□□□ 0.31
Copb2-201ENSMUST00000035033 Plekhh1Q80TI1 1356 aa16.97■□□□□ 0.31
Copb2-201ENSMUST00000035033 Kcnh8P59111 1102 aa16.97■□□□□ 0.31
Copb2-201ENSMUST00000035033 Iqsec2Q5DU25 1478 aa16.97■□□□□ 0.31
Copb2-201ENSMUST00000035033 Ppp4r2Q0VGB7 417 aa16.96■□□□□ 0.31
Copb2-201ENSMUST00000035033 Wdr43Q6ZQL4 677 aaKnown RBP16.96■□□□□ 0.31
Copb2-201ENSMUST00000035033 Tnrc6bQ8BKI2 1810 aaKnown RBP16.96■□□□□ 0.31
Copb2-201ENSMUST00000035033 Topaz1E5FYH1 1653 aa16.95■□□□□ 0.3
Copb2-201ENSMUST00000035033 Trim28Q62318 834 aa16.95■□□□□ 0.3
Copb2-201ENSMUST00000035033 Slc12a5Q91V14 1138 aa16.95■□□□□ 0.3
Copb2-201ENSMUST00000035033 Lmtk3Q5XJV6 1424 aa16.95■□□□□ 0.3
Copb2-201ENSMUST00000035033 Sox12Q04890 314 aa16.95■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms