RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Myo3aQ8K3H5 1613 aa21.69■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Med14A2ABV5 1459 aaKnown RBP21.69■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Nphp4P59240 1425 aa21.69■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Map4k4P97820 1233 aaKnown RBP21.69■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Ralbp1Q62172 648 aa21.68■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Hsp90ab1P11499 724 aaKnown RBP21.67■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Ncbp3Q8BZR9 615 aaKnown RBP21.66■■□□□ 1.06
Ctcf-201ENSMUST00000005841 P2rx7Q9Z1M0 595 aa21.66■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Pank1Q8K4K6 548 aa21.66■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Tnpo1Q8BFY9 898 aaKnown RBP21.65■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Trim30dE9PWL0 497 aa21.65■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Trim58Q5NCC9 485 aa21.65■■□□□ 1.06
Ctcf-201ENSMUST00000005841 MaddQ80U28 1577 aa21.65■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Rabep1O35551 862 aa21.64■■□□□ 1.06
Ctcf-201ENSMUST00000005841 Gm6268A2A3U9 297 aa21.64■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Pnmal2G3X9N3 661 aa21.64■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Il4rP16382 810 aa21.64■■□□□ 1.05
Ctcf-201ENSMUST00000005841 DmtnQ9WV69 405 aa21.64■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Mcm4P49717 862 aa21.64■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Cdc42bpgQ80UW5 1551 aa21.63■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Phlpp2Q8BXA7 1320 aa21.63■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Neo1P97798 1493 aa21.63■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Kiaa0556Q8C753 1610 aa21.63■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Apbb1Q9QXJ1 710 aa21.63■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Srcin1Q9QWI6 1250 aa21.63■■□□□ 1.05
Ctcf-201ENSMUST00000005841 IbtkQ6ZPR6 1352 aaKnown RBP21.63■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Kif7B7ZNG0 1348 aa21.62■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Catsper2A2ARP9 588 aa21.62■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Uggt1Q6P5E4 1551 aa21.61■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Efcab6Q6P1E8 1516 aa21.61■■□□□ 1.05
Ctcf-201ENSMUST00000005841 4930567H17RikQ3V0K5 233 aa21.6■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Scaf11E9PZM7 1456 aaKnown RBP21.6■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Usp32F8VPZ3 1604 aa21.58■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Adgrb3Q80ZF8 1522 aa21.58■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Terf2O35144 541 aa21.58■■□□□ 1.05
Ctcf-201ENSMUST00000005841 Abca6Q8K441 1624 aa21.58■■□□□ 1.05
Ctcf-201ENSMUST00000005841 KarsQ99MN1 595 aaKnown RBP21.58■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Pde4cQ3UEI1 686 aa21.57■■□□□ 1.04
Ctcf-201ENSMUST00000005841 NgefQ8CHT1 710 aa21.57■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Mdc1Q5PSV9 1707 aa21.56■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Prdm16A2A935 1275 aa21.56■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Nsd2Q8BVE8 1365 aa21.55■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Dnttip2Q8R2M2 758 aaKnown RBP21.55■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Jph4Q80WT0 628 aa21.55■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Golga2Q921M4 999 aa21.55■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Rrp7aQ9D1C9 280 aaKnown RBP21.55■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Znf541Q0GGX2 1363 aa21.54■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Ylpm1Q9R0I7 1386 aaKnown RBP21.54■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Eif2ak4Q9QZ05 1648 aa21.54■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Ncapd2Q8K2Z4 1392 aa21.54■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Hs1bp3Q3TC93 395 aa21.53■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Atl3Q91YH5 541 aa21.53■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Nrxn1Q9CS84 1514 aa21.53■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Spag9Q58A65 1321 aaKnown RBP21.53■■□□□ 1.04
Ctcf-201ENSMUST00000005841 Atxn3Q9CVD2 355 aa21.51■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Rbm25B2RY56 838 aaKnown RBP21.51■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Paxip1Q6NZQ4 1056 aa21.51■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Sart1Q9Z315 806 aaKnown RBP21.51■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Ssh1Q76I79 1042 aa21.5■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Isy1Q69ZQ2 285 aaKnown RBP21.5■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Akap12Q9WTQ5 1684 aa21.5■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Chd1P40201 1711 aa21.5■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Cul9Q80TT8 1865 aa21.5■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Prex1Q69ZK0 1650 aa21.49■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Zbtb4Q5F293 982 aa21.49■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Neurod2Q62414 383 aa21.49■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Znf692Q3U381 531 aa21.48■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Topbp1Q6ZQF0 1515 aa21.48■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Ppp1r3fQ9JIG4 799 aa21.48■■□□□ 1.03
Ctcf-201ENSMUST00000005841 AknaQ80VW7 1404 aa21.47■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Nos1Q9Z0J4 1429 aa21.47■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Sall3Q62255 1320 aa21.47■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Nsfl1cQ9CZ44 370 aaKnown RBP21.46■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Mroh1E0CZ22 1640 aa21.46■■□□□ 1.03
Ctcf-201ENSMUST00000005841 Clcn1Q64347 994 aa21.45■■□□□ 1.02
Ctcf-201ENSMUST00000005841 InsrP15208 1372 aa21.45■■□□□ 1.02
Ctcf-201ENSMUST00000005841 Uhrf1bp1B2KF50 1429 aa21.44■■□□□ 1.02
Ctcf-201ENSMUST00000005841 Plxnc1Q9QZC2 1574 aa21.44■■□□□ 1.02
Ctcf-201ENSMUST00000005841 PogkQ80TC5 607 aa21.43■■□□□ 1.02
Ctcf-201ENSMUST00000005841 AU019823E9PUQ3 292 aa21.43■■□□□ 1.02
Ctcf-201ENSMUST00000005841 Tex2Q6ZPJ0 1128 aaKnown RBP21.43■■□□□ 1.02
Ctcf-201ENSMUST00000005841 Tecpr2Q3UH45 1423 aa21.43■■□□□ 1.02
Ctcf-201ENSMUST00000005841 Gm10093D3YYI8 482 aa21.41■■□□□ 1.02
Ctcf-201ENSMUST00000005841 Hdac1O09106 482 aaKnown RBP21.41■■□□□ 1.02
Ctcf-201ENSMUST00000005841 Stard8Q8K031 1019 aa21.41■■□□□ 1.02
Ctcf-201ENSMUST00000005841 AatkQ80YE4 1365 aa21.41■■□□□ 1.02
Ctcf-201ENSMUST00000005841 CltcQ68FD5 1675 aaKnown RBP21.4■■□□□ 1.02
Ctcf-201ENSMUST00000005841 Naip7Q9JIB3 1402 aa21.38■■□□□ 1.01
Ctcf-201ENSMUST00000005841 Kdm4cQ8VCD7 1054 aa21.37■■□□□ 1.01
Ctcf-201ENSMUST00000005841 Rtn4Q99P72 1162 aaKnown RBP21.37■■□□□ 1.01
Ctcf-201ENSMUST00000005841 Skint5A7XUY5 1461 aa21.35■■□□□ 1.01
Ctcf-201ENSMUST00000005841 Dhx16G3X8X0 1044 aaKnown RBP21.35■■□□□ 1.01
Ctcf-201ENSMUST00000005841 Depdc5P61460 1591 aa21.35■■□□□ 1.01
Ctcf-201ENSMUST00000005841 Brd1E9PZ26 1189 aaKnown RBP21.33■■□□□ 1.01
Ctcf-201ENSMUST00000005841 Nom1Q3UFM5 854 aaKnown RBP21.33■■□□□ 1
Ctcf-201ENSMUST00000005841 Map3k5O35099 1380 aa21.32■■□□□ 1
Ctcf-201ENSMUST00000005841 Ripk4Q9ERK0 786 aa21.32■■□□□ 1
Ctcf-201ENSMUST00000005841 Zfp777B9EKF4 885 aa21.32■■□□□ 1
Ctcf-201ENSMUST00000005841 Spryd3E9Q9B3 442 aa21.32■■□□□ 1
Ctcf-201ENSMUST00000005841 Ttc21aQ8C0S4 1314 aa21.31■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms