RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C RPS11BP0CX48 156 aaKnown RBP2.32□□□□□ -2.04
SQS1YNL224C BSC4P53841 131 aa2.32□□□□□ -2.04
SQS1YNL224C YMR321CQ04898 105 aa2.31□□□□□ -2.04
SQS1YNL224C TMC1Q08422 150 aaPredicted RBP2.31□□□□□ -2.04
SQS1YNL224C SHU1P38751 150 aa2.3□□□□□ -2.04
SQS1YNL224C YPR195CQ06594 109 aa2.3□□□□□ -2.04
SQS1YNL224C YDR182W-AQ3E796 67 aa2.3□□□□□ -2.04
SQS1YNL224C TOM7P53507 60 aa2.3□□□□□ -2.04
SQS1YNL224C YEL014CP39999 101 aa2.29□□□□□ -2.04
SQS1YNL224C RPL38P49167 78 aaKnown RBP2.29□□□□□ -2.04
SQS1YNL224C YDR115WQ04598 105 aa2.29□□□□□ -2.04
SQS1YNL224C YAL067W-AQ8TGK6 75 aa2.29□□□□□ -2.04
SQS1YNL224C SEN1Q00416 2231 aaKnown RBP2.29□□□□□ -2.04
SQS1YNL224C MRPS12P53732 153 aa2.29□□□□□ -2.04
SQS1YNL224C DAD4P69851 72 aa2.29□□□□□ -2.04
SQS1YNL224C COA3Q3E7B2 85 aa2.28□□□□□ -2.05
SQS1YNL224C COX8P04039 78 aa2.27□□□□□ -2.05
SQS1YNL224C YBR219CP38317 127 aa2.27□□□□□ -2.05
SQS1YNL224C YDR210WQ03482 75 aa2.27□□□□□ -2.05
SQS1YNL224C LCL2Q08045 131 aa2.27□□□□□ -2.05
SQS1YNL224C HUG1Q6Q5K6 68 aa2.26□□□□□ -2.05
SQS1YNL224C BEM2P39960 2167 aaKnown RBP2.26□□□□□ -2.05
SQS1YNL224C YGL014C-AP0C5N1 53 aa2.25□□□□□ -2.05
SQS1YNL224C AQY2P0CD90 149 aa2.25□□□□□ -2.05
SQS1YNL224C YMR254CQ04838 102 aa2.25□□□□□ -2.05
SQS1YNL224C URA2P07259 2214 aaKnown RBP2.25□□□□□ -2.05
SQS1YNL224C YMR141CP40211 102 aa2.24□□□□□ -2.05
SQS1YNL224C YIL102CP40488 101 aa2.24□□□□□ -2.05
SQS1YNL224C YJR107C-AP0CT86 78 aa2.24□□□□□ -2.05
SQS1YNL224C MGR2Q02889 113 aa2.24□□□□□ -2.05
SQS1YNL224C YLR255CO13574 117 aa2.23□□□□□ -2.05
SQS1YNL224C SGF11Q03067 99 aa2.23□□□□□ -2.05
SQS1YNL224C YMR122W-AQ3E842 84 aa2.23□□□□□ -2.05
SQS1YNL224C YSF3P0C074 85 aaPredicted RBP2.22□□□□□ -2.05
SQS1YNL224C YCL048W-AQ2V2Q2 79 aa2.22□□□□□ -2.05
SQS1YNL224C YCR001WP25347 104 aa2.22□□□□□ -2.05
SQS1YNL224C RPL33BP41056 107 aaKnown RBP2.22□□□□□ -2.05
SQS1YNL224C YNL122CP53921 115 aaPredicted RBP2.22□□□□□ -2.05
SQS1YNL224C ATP17Q06405 101 aa2.22□□□□□ -2.05
SQS1YNL224C YLR157W-DP0CE99 70 aa2.21□□□□□ -2.06
SQS1YNL224C YMR001C-AQ8TGS9 76 aa2.21□□□□□ -2.06
SQS1YNL224C HUB1Q6Q546 73 aa2.2□□□□□ -2.06
SQS1YNL224C YER084WP40057 128 aa2.2□□□□□ -2.06
SQS1YNL224C YPR108W-AQ3E7B3 70 aa2.2□□□□□ -2.06
SQS1YNL224C YJR146WP47174 117 aa2.19□□□□□ -2.06
SQS1YNL224C YLR122CQ12312 125 aa2.19□□□□□ -2.06
SQS1YNL224C FAB1P34756 2278 aa2.19□□□□□ -2.06
SQS1YNL224C TOS6P48560 102 aa2.19□□□□□ -2.06
SQS1YNL224C YBR201C-AQ2V2Q3 67 aa2.19□□□□□ -2.06
SQS1YNL224C YFR009W-AP0C5M9 85 aa2.18□□□□□ -2.06
SQS1YNL224C MVB12P42939 101 aa2.18□□□□□ -2.06
SQS1YNL224C Q0032Q9ZZX7 96 aa2.18□□□□□ -2.06
SQS1YNL224C YPR010C-AA5Z2X5 72 aa2.18□□□□□ -2.06
SQS1YNL224C ATP18P81450 59 aa2.18□□□□□ -2.06
SQS1YNL224C VAM10Q08474 114 aa2.17□□□□□ -2.06
SQS1YNL224C YFL067WP43537 175 aa2.17□□□□□ -2.06
SQS1YNL224C RPL33AP05744 107 aaKnown RBP2.16□□□□□ -2.06
SQS1YNL224C SDH6Q3E785 79 aa2.16□□□□□ -2.06
SQS1YNL224C YOR008C-AQ3E7B9 74 aa2.16□□□□□ -2.06
SQS1YNL224C YCL042WP25572 119 aa2.15□□□□□ -2.07
SQS1YNL224C YGL258W-AQ3E740 77 aa2.15□□□□□ -2.07
SQS1YNL224C POL2P21951 2222 aaKnown RBP2.15□□□□□ -2.07
SQS1YNL224C TAR1Q8TGM6 124 aa2.14□□□□□ -2.07
SQS1YNL224C YOL013W-AP0C272 63 aaPredicted RBP2.14□□□□□ -2.07
SQS1YNL224C YOR072WQ08486 104 aa2.14□□□□□ -2.07
SQS1YNL224C YEL008WP40001 126 aa2.13□□□□□ -2.07
SQS1YNL224C YDL012CQ12489 107 aa2.13□□□□□ -2.07
SQS1YNL224C YGL041C-BQ3E750 60 aa2.13□□□□□ -2.07
SQS1YNL224C YBL039W-BP0C268 59 aa2.12□□□□□ -2.07
SQS1YNL224C YLR342W-AQ3E810 57 aa2.12□□□□□ -2.07
SQS1YNL224C YJL144WP47009 104 aa2.12□□□□□ -2.07
SQS1YNL224C YBR056W-AI2HB52 66 aa2.11□□□□□ -2.07
SQS1YNL224C RPL43AP0CX25 92 aaKnown RBP2.11□□□□□ -2.07
SQS1YNL224C RPL43BP0CX26 92 aa2.11□□□□□ -2.07
SQS1YNL224C YKR073CP36153 106 aa2.11□□□□□ -2.07
SQS1YNL224C YDR114CQ04597 100 aa2.11□□□□□ -2.07
SQS1YNL224C SEC16P48415 2195 aaKnown RBP2.11□□□□□ -2.07
SQS1YNL224C YGR240C-AQ3E786 66 aa2.1□□□□□ -2.07
SQS1YNL224C LCL1Q02786 101 aa2.09□□□□□ -2.07
SQS1YNL224C YJR128WP47162 119 aa2.08□□□□□ -2.08
SQS1YNL224C YGR025WP53216 100 aa2.08□□□□□ -2.08
SQS1YNL224C AUA1P32450 94 aa2.08□□□□□ -2.08
SQS1YNL224C NCE101Q02820 53 aa2.08□□□□□ -2.08
SQS1YNL224C YBR200W-AQ3E755 54 aa2.08□□□□□ -2.08
SQS1YNL224C YHR213W-BQ8TGK1 99 aa2.06□□□□□ -2.08
SQS1YNL224C YLL006W-AQ3E814 58 aa2.05□□□□□ -2.08
SQS1YNL224C YIL086CP40503 102 aa2.03□□□□□ -2.08
SQS1YNL224C YHR007C-AQ07074 71 aa2.03□□□□□ -2.08
SQS1YNL224C TOM1Q03280 3268 aa2.03□□□□□ -2.08
SQS1YNL224C GIS2P53849 153 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
SQS1YNL224C YJL133C-AQ3E7A3 74 aa2.03□□□□□ -2.08
SQS1YNL224C YOL097W-AQ3E7Y9 61 aa2.03□□□□□ -2.08
SQS1YNL224C RDS3Q06835 107 aaPredicted RBP2.02□□□□□ -2.09
SQS1YNL224C YOR011W-AQ3E807 68 aa2□□□□□ -2.09
SQS1YNL224C VPS13Q07878 3144 aa2□□□□□ -2.09
SQS1YNL224C YOR394C-AQ8TGJ0 55 aa1.99□□□□□ -2.09
SQS1YNL224C IRA2P19158 3079 aa1.99□□□□□ -2.09
SQS1YNL224C COX7P10174 60 aa1.99□□□□□ -2.09
SQS1YNL224C YAR064WP39563 99 aa1.99□□□□□ -2.09
SQS1YNL224C RPS27AP35997 82 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms