RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C BSC4P53841 131 aa1.81□□□□□ -2.12
CUS1YMR240C COX19Q3E731 98 aa1.81□□□□□ -2.12
CUS1YMR240C YNR034W-AQ3E841 98 aa1.81□□□□□ -2.12
CUS1YMR240C BLM10P43583 2143 aa1.81□□□□□ -2.12
CUS1YMR240C YLR255CO13574 117 aa1.8□□□□□ -2.12
CUS1YMR240C YBR292CP38357 123 aa1.8□□□□□ -2.12
CUS1YMR240C YIL086CP40503 102 aa1.8□□□□□ -2.12
CUS1YMR240C LCL1Q02786 101 aa1.8□□□□□ -2.12
CUS1YMR240C PAU20Q08322 120 aa1.8□□□□□ -2.12
CUS1YMR240C POL2P21951 2222 aaKnown RBP1.8□□□□□ -2.12
CUS1YMR240C RPS11AP0CX47 156 aaKnown RBP1.79□□□□□ -2.12
CUS1YMR240C RPS11BP0CX48 156 aaKnown RBP1.79□□□□□ -2.12
CUS1YMR240C YHR214C-DP0CX93 97 aa1.79□□□□□ -2.12
CUS1YMR240C YKL065W-AQ2V2P2 73 aa1.79□□□□□ -2.12
CUS1YMR240C YDR381C-AQ3E6R5 114 aa1.79□□□□□ -2.12
CUS1YMR240C PAI3P01094 68 aa1.78□□□□□ -2.12
CUS1YMR240C PDX3P38075 228 aaKnown RBP1.78□□□□□ -2.12
CUS1YMR240C MPC2P38857 129 aa1.78□□□□□ -2.12
CUS1YMR240C RPL37BP51402 88 aaKnown RBP1.78□□□□□ -2.12
CUS1YMR240C SHU1P38751 150 aa1.77□□□□□ -2.13
CUS1YMR240C YJR128WP47162 119 aa1.77□□□□□ -2.13
CUS1YMR240C YOR314WQ12506 109 aa1.77□□□□□ -2.13
CUS1YMR240C YDR119W-AQ2V2P9 66 aa1.77□□□□□ -2.13
CUS1YMR240C TAO3P40468 2376 aa1.76□□□□□ -2.13
CUS1YMR240C YPR145C-AQ2V2P0 78 aa1.76□□□□□ -2.13
CUS1YMR240C YDR524C-BQ3E6R4 66 aa1.76□□□□□ -2.13
CUS1YMR240C YKL018C-AQ3E7A7 99 aa1.76□□□□□ -2.13
CUS1YMR240C YER188C-AP0C0V2 99 aa1.75□□□□□ -2.13
CUS1YMR240C YOR105WQ08504 108 aa1.75□□□□□ -2.13
CUS1YMR240C YHR213W-BQ8TGK1 99 aa1.75□□□□□ -2.13
CUS1YMR240C HHY1P39982 102 aa1.74□□□□□ -2.13
CUS1YMR240C SWM2P40342 146 aa1.74□□□□□ -2.13
CUS1YMR240C CSF1Q12150 2958 aa1.74□□□□□ -2.13
CUS1YMR240C SEN1Q00416 2231 aaKnown RBP1.74□□□□□ -2.13
CUS1YMR240C YAL065CO13511 128 aa1.72□□□□□ -2.13
CUS1YMR240C FPR2P32472 135 aa1.72□□□□□ -2.13
CUS1YMR240C PAU23Q07987 124 aa1.72□□□□□ -2.13
CUS1YMR240C PAU17Q12370 124 aa1.72□□□□□ -2.13
CUS1YMR240C YDR010CQ12426 110 aa1.72□□□□□ -2.13
CUS1YMR240C ATX1P38636 73 aa1.71□□□□□ -2.14
CUS1YMR240C YMR141CP40211 102 aa1.71□□□□□ -2.14
CUS1YMR240C YOL131WQ08270 108 aa1.71□□□□□ -2.14
CUS1YMR240C FMP27Q06179 2628 aa1.71□□□□□ -2.14
CUS1YMR240C YNL042W-BQ3E7Z2 85 aa1.69□□□□□ -2.14
CUS1YMR240C NOP10Q6Q547 58 aaPredicted RBP1.68□□□□□ -2.14
CUS1YMR240C YPR117WQ06116 2489 aa1.68□□□□□ -2.14
CUS1YMR240C QCR9P22289 66 aa1.67□□□□□ -2.14
CUS1YMR240C YFL041W-AQ3E817 63 aa1.67□□□□□ -2.14
CUS1YMR240C YGR121W-AQ3E816 71 aa1.66□□□□□ -2.14
CUS1YMR240C YIL156W-BQ2V2P4 73 aa1.66□□□□□ -2.14
CUS1YMR240C YOR034C-AQ3E735 80 aa1.66□□□□□ -2.14
CUS1YMR240C YBR072C-AQ3E794 53 aa1.66□□□□□ -2.14
CUS1YMR240C YMR122W-AQ3E842 84 aa1.66□□□□□ -2.14
CUS1YMR240C IRA1P18963 3092 aa1.65□□□□□ -2.15
CUS1YMR240C BPH1P25356 2167 aa1.65□□□□□ -2.15
CUS1YMR240C YHR173CP38864 112 aa1.65□□□□□ -2.15
CUS1YMR240C YBR201C-AQ2V2Q3 67 aa1.65□□□□□ -2.15
CUS1YMR240C IRA2P19158 3079 aa1.64□□□□□ -2.15
CUS1YMR240C YDR034W-BQ6Q5X2 51 aa1.64□□□□□ -2.15
CUS1YMR240C Q0032Q9ZZX7 96 aa1.64□□□□□ -2.15
CUS1YMR240C TIM12P32830 109 aa1.63□□□□□ -2.15
CUS1YMR240C COX7P10174 60 aa1.62□□□□□ -2.15
CUS1YMR240C YOL097W-AQ3E7Y9 61 aa1.62□□□□□ -2.15
CUS1YMR240C SSS1P35179 80 aa1.61□□□□□ -2.15
CUS1YMR240C ATP18P81450 59 aa1.61□□□□□ -2.15
CUS1YMR240C YGR035W-AQ45U48 73 aa1.61□□□□□ -2.15
CUS1YMR240C RPS27AP35997 82 aaKnown RBP1.6□□□□□ -2.15
CUS1YMR240C RPS27BP38711 82 aa1.6□□□□□ -2.15
CUS1YMR240C SPI1P40092 148 aa1.6□□□□□ -2.15
CUS1YMR240C TEL1P38110 2787 aa1.6□□□□□ -2.15
CUS1YMR240C YFR010W-AP0C5N0 62 aa1.59□□□□□ -2.16
CUS1YMR240C RPL38P49167 78 aaKnown RBP1.59□□□□□ -2.16
CUS1YMR240C TRA1P38811 3744 aa1.58□□□□□ -2.16
CUS1YMR240C COX9P07255 59 aa1.58□□□□□ -2.16
CUS1YMR240C YNL198CP40166 100 aa1.58□□□□□ -2.16
CUS1YMR240C NCE101Q02820 53 aa1.58□□□□□ -2.16
CUS1YMR240C YIL046W-AQ3E7Z4 54 aa1.58□□□□□ -2.16
CUS1YMR240C GCN1P33892 2672 aaKnown RBP1.57□□□□□ -2.16
CUS1YMR240C URA2P07259 2214 aaKnown RBP1.57□□□□□ -2.16
CUS1YMR240C YDL022C-AP0C5L6 82 aa1.57□□□□□ -2.16
CUS1YMR240C RPL43AP0CX25 92 aaKnown RBP1.57□□□□□ -2.16
CUS1YMR240C RPL43BP0CX26 92 aa1.57□□□□□ -2.16
CUS1YMR240C PAU7P39545 55 aa1.57□□□□□ -2.16
CUS1YMR240C SGF11Q03067 99 aa1.57□□□□□ -2.16
CUS1YMR240C TOR2P32600 2474 aaKnown RBP1.56□□□□□ -2.16
CUS1YMR240C AUA1P32450 94 aa1.55□□□□□ -2.16
CUS1YMR240C ATP17Q06405 101 aa1.55□□□□□ -2.16
CUS1YMR240C VMA9Q3E7B6 73 aa1.55□□□□□ -2.16
CUS1YMR240C SDH6Q3E785 79 aa1.54□□□□□ -2.16
CUS1YMR240C RPC10P40422 70 aa1.53□□□□□ -2.16
CUS1YMR240C ERI1P62651 68 aaKnown RBP1.53□□□□□ -2.16
CUS1YMR240C PRP8P33334 2413 aaKnown RBP1.53□□□□□ -2.16
CUS1YMR240C YSY6P38374 65 aa1.52□□□□□ -2.17
CUS1YMR240C YLR146W-AQ2V2P1 62 aa1.52□□□□□ -2.17
CUS1YMR240C YIL102C-AQ2V2P5 75 aa1.52□□□□□ -2.17
CUS1YMR240C YOR192C-CQ3E736 78 aa1.52□□□□□ -2.17
CUS1YMR240C COA2Q3E823 68 aa1.52□□□□□ -2.17
CUS1YMR240C YLR307C-AQ3E825 87 aa1.52□□□□□ -2.17
CUS1YMR240C YPR108W-AQ3E7B3 70 aa1.51□□□□□ -2.17
CUS1YMR240C YLR157W-EP0CF00 54 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms