RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W YDR274CP87283 123 aa1.28□□□□□ -2.2
RTP1YMR185W FYV5P25585 152 aa1.27□□□□□ -2.21
RTP1YMR185W RPB9P27999 122 aa1.27□□□□□ -2.21
RTP1YMR185W RSM18P40033 138 aa1.27□□□□□ -2.21
RTP1YMR185W TDA2P40045 126 aa1.27□□□□□ -2.21
RTP1YMR185W GIS2P53849 153 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
RTP1YMR185W YOL166W-AQ8TGJ1 51 aa1.27□□□□□ -2.21
RTP1YMR185W YHR212W-AP0CX91 67 aa1.27□□□□□ -2.21
RTP1YMR185W EDC2P40023 145 aaPredicted RBP1.27□□□□□ -2.21
RTP1YMR185W EDC1P53080 175 aaPredicted RBP1.27□□□□□ -2.21
RTP1YMR185W YLR162WQ06235 118 aa1.27□□□□□ -2.21
RTP1YMR185W KSH1Q8TGJ3 72 aa1.27□□□□□ -2.21
RTP1YMR185W TRA1P38811 3744 aa1.27□□□□□ -2.21
RTP1YMR185W AQY2P0CD90 149 aa1.26□□□□□ -2.21
RTP1YMR185W BET1P22804 142 aa1.26□□□□□ -2.21
RTP1YMR185W ICS3P47034 131 aa1.26□□□□□ -2.21
RTP1YMR185W YBR230W-AQ3E762 66 aa1.26□□□□□ -2.21
RTP1YMR185W TDA8Q6B2U8 126 aa1.26□□□□□ -2.21
RTP1YMR185W BPH1P25356 2167 aa1.26□□□□□ -2.21
RTP1YMR185W YLR281CQ05863 155 aa1.26□□□□□ -2.21
RTP1YMR185W YCR041WP37265 110 aa1.26□□□□□ -2.21
RTP1YMR185W SPC1P46965 94 aa1.26□□□□□ -2.21
RTP1YMR185W SGF11Q03067 99 aa1.26□□□□□ -2.21
RTP1YMR185W YKL065W-AQ2V2P2 73 aa1.26□□□□□ -2.21
RTP1YMR185W YNL042W-BQ3E7Z2 85 aa1.26□□□□□ -2.21
RTP1YMR185W NOP10Q6Q547 58 aaPredicted RBP1.26□□□□□ -2.21
RTP1YMR185W IGD1P43598 195 aa1.25□□□□□ -2.21
RTP1YMR185W SMD1Q02260 146 aaPredicted RBP1.25□□□□□ -2.21
RTP1YMR185W YDR115WQ04598 105 aa1.25□□□□□ -2.21
RTP1YMR185W YGR121W-AQ3E816 71 aa1.25□□□□□ -2.21
RTP1YMR185W YJL127C-BQ3E828 52 aa1.25□□□□□ -2.21
RTP1YMR185W YHR213W-BQ8TGK1 99 aa1.25□□□□□ -2.21
RTP1YMR185W HHF1P02309 103 aaKnown RBP1.24□□□□□ -2.21
RTP1YMR185W SPT4P32914 102 aaPredicted RBP1.24□□□□□ -2.21
RTP1YMR185W YBL081WP38180 368 aaKnown RBP1.24□□□□□ -2.21
RTP1YMR185W ECM19Q06011 112 aa1.24□□□□□ -2.21
RTP1YMR185W YOL014WQ08110 124 aa1.24□□□□□ -2.21
RTP1YMR185W YLL066W-BQ8TGJ7 56 aa1.24□□□□□ -2.21
RTP1YMR185W YCR001WP25347 104 aa1.24□□□□□ -2.21
RTP1YMR185W YEL045CP32616 141 aa1.24□□□□□ -2.21
RTP1YMR185W YAL064WP39711 94 aa1.24□□□□□ -2.21
RTP1YMR185W RPL38P49167 78 aaKnown RBP1.24□□□□□ -2.21
RTP1YMR185W RTC6O14464 93 aa1.23□□□□□ -2.21
RTP1YMR185W YHL005CP38752 130 aa1.23□□□□□ -2.21
RTP1YMR185W YGL041C-BQ3E750 60 aa1.23□□□□□ -2.21
RTP1YMR185W YJL133C-AQ3E7A3 74 aa1.23□□□□□ -2.21
RTP1YMR185W YNL277W-AQ3E7Z0 62 aa1.23□□□□□ -2.21
RTP1YMR185W YGR035W-AQ45U48 73 aa1.23□□□□□ -2.21
RTP1YMR185W DDR2P89113 61 aa1.23□□□□□ -2.21
RTP1YMR185W YOL013W-AP0C272 63 aaPredicted RBP1.22□□□□□ -2.21
RTP1YMR185W PEX22P39718 180 aa1.22□□□□□ -2.21
RTP1YMR185W YGL193CP53097 103 aa1.22□□□□□ -2.21
RTP1YMR185W MIC10Q96VH5 97 aa1.22□□□□□ -2.21
RTP1YMR185W YJL197C-AP0C5P0 93 aa1.22□□□□□ -2.21
RTP1YMR185W IRA2P19158 3079 aa1.22□□□□□ -2.21
RTP1YMR185W FMP27Q06179 2628 aa1.22□□□□□ -2.21
RTP1YMR185W YAR023CD6VPM8 179 aa1.22□□□□□ -2.21
RTP1YMR185W RPL43AP0CX25 92 aaKnown RBP1.22□□□□□ -2.21
RTP1YMR185W RPL43BP0CX26 92 aa1.22□□□□□ -2.21
RTP1YMR185W RPS30AP0CX33 63 aaKnown RBP1.22□□□□□ -2.21
RTP1YMR185W RPS30BP0CX34 63 aaKnown RBP1.22□□□□□ -2.21
RTP1YMR185W LIP1Q03579 150 aa1.22□□□□□ -2.21
RTP1YMR185W YOR072WQ08486 104 aa1.22□□□□□ -2.21
RTP1YMR185W HUB1Q6Q546 73 aa1.22□□□□□ -2.21
RTP1YMR185W Q0032Q9ZZX7 96 aa1.22□□□□□ -2.21
RTP1YMR185W YOR381W-AQ3E804 55 aa1.21□□□□□ -2.22
RTP1YMR185W MDN1Q12019 4910 aaKnown RBP1.21□□□□□ -2.22
RTP1YMR185W MMS2P53152 137 aa1.21□□□□□ -2.22
RTP1YMR185W YER188C-AP0C0V2 99 aa1.2□□□□□ -2.22
RTP1YMR185W YHR125WP38831 101 aa1.2□□□□□ -2.22
RTP1YMR185W BSC4P53841 131 aa1.2□□□□□ -2.22
RTP1YMR185W YMR122CQ03879 124 aa1.2□□□□□ -2.22
RTP1YMR185W SDH6Q3E785 79 aa1.2□□□□□ -2.22
RTP1YMR185W URA2P07259 2214 aaKnown RBP1.2□□□□□ -2.22
RTP1YMR185W YAR064WP39563 99 aa1.19□□□□□ -2.22
RTP1YMR185W OST5Q92316 86 aa1.19□□□□□ -2.22
RTP1YMR185W SPG1P50088 95 aa1.19□□□□□ -2.22
RTP1YMR185W SNA2P56508 79 aa1.19□□□□□ -2.22
RTP1YMR185W YHR007C-AQ07074 71 aa1.19□□□□□ -2.22
RTP1YMR185W YOL097W-AQ3E7Y9 61 aa1.19□□□□□ -2.22
RTP1YMR185W CUP1-1P0CX80 61 aa1.19□□□□□ -2.22
RTP1YMR185W CUP1-2P0CX81 61 aa1.19□□□□□ -2.22
RTP1YMR185W YIL102CP40488 101 aa1.19□□□□□ -2.22
RTP1YMR185W YOR268CQ08734 132 aa1.19□□□□□ -2.22
RTP1YMR185W YPR117WQ06116 2489 aa1.18□□□□□ -2.22
RTP1YMR185W IRA1P18963 3092 aa1.18□□□□□ -2.22
RTP1YMR185W AUA1P32450 94 aa1.18□□□□□ -2.22
RTP1YMR185W RRT15Q3E811 62 aa1.18□□□□□ -2.22
RTP1YMR185W YMR001C-AQ8TGS9 76 aa1.18□□□□□ -2.22
RTP1YMR185W YJR085CP47131 105 aaKnown RBP1.18□□□□□ -2.22
RTP1YMR185W YPR153WQ06537 140 aa1.18□□□□□ -2.22
RTP1YMR185W YHR073W-AP0C5N7 58 aa1.17□□□□□ -2.22
RTP1YMR185W YLR157W-DP0CE99 70 aa1.17□□□□□ -2.22
RTP1YMR185W GCN1P33892 2672 aaKnown RBP1.17□□□□□ -2.22
RTP1YMR185W YBR027CP38220 110 aa1.16□□□□□ -2.22
RTP1YMR185W YDL012CQ12489 107 aa1.16□□□□□ -2.22
RTP1YMR185W YCR043CP25361 127 aa1.16□□□□□ -2.22
RTP1YMR185W YGL149WP53116 101 aa1.16□□□□□ -2.22
RTP1YMR185W ATP17Q06405 101 aa1.16□□□□□ -2.22
RTP1YMR185W YLR255CO13574 117 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms