RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C KSH1Q8TGJ3 72 aa2.48□□□□□ -2.01
SHH3YMR118C RPL36BO14455 100 aaKnown RBP2.47□□□□□ -2.01
SHH3YMR118C RPL36AP05745 100 aaPredicted RBP2.47□□□□□ -2.01
SHH3YMR118C FYV5P25585 152 aa2.47□□□□□ -2.01
SHH3YMR118C RPB9P27999 122 aa2.47□□□□□ -2.01
SHH3YMR118C COX23P38824 151 aa2.47□□□□□ -2.01
SHH3YMR118C SFT1P43682 97 aa2.47□□□□□ -2.01
SHH3YMR118C YGR164WP53291 111 aa2.47□□□□□ -2.01
SHH3YMR118C YDR274CP87283 123 aa2.47□□□□□ -2.01
SHH3YMR118C YDR182W-AQ3E796 67 aa2.47□□□□□ -2.01
SHH3YMR118C YER145C-AA0A023PYF4 145 aa2.46□□□□□ -2.02
SHH3YMR118C YBR144CP34215 104 aa2.46□□□□□ -2.02
SHH3YMR118C YAL064WP39711 94 aa2.46□□□□□ -2.02
SHH3YMR118C EDC2P40023 145 aaPredicted RBP2.46□□□□□ -2.02
SHH3YMR118C YMR320WQ04897 101 aa2.46□□□□□ -2.02
SHH3YMR118C YOL014WQ08110 124 aa2.46□□□□□ -2.02
SHH3YMR118C YBR230W-AQ3E762 66 aa2.46□□□□□ -2.02
SHH3YMR118C YJL127C-BQ3E828 52 aa2.46□□□□□ -2.02
SHH3YMR118C TDA8Q6B2U8 126 aa2.46□□□□□ -2.02
SHH3YMR118C YBR056W-AI2HB52 66 aa2.45□□□□□ -2.02
SHH3YMR118C YBL081WP38180 368 aaKnown RBP2.45□□□□□ -2.02
SHH3YMR118C YHR213W-BQ8TGK1 99 aa2.45□□□□□ -2.02
SHH3YMR118C RPL33AP05744 107 aaKnown RBP2.44□□□□□ -2.02
SHH3YMR118C RPL33BP41056 107 aaKnown RBP2.44□□□□□ -2.02
SHH3YMR118C IGD1P43598 195 aa2.44□□□□□ -2.02
SHH3YMR118C SGF11Q03067 99 aa2.44□□□□□ -2.02
SHH3YMR118C YNL042W-BQ3E7Z2 85 aa2.44□□□□□ -2.02
SHH3YMR118C YOL166W-AQ8TGJ1 51 aa2.44□□□□□ -2.02
SHH3YMR118C YHL005CP38752 130 aa2.43□□□□□ -2.02
SHH3YMR118C YIL102CP40488 101 aa2.43□□□□□ -2.02
SHH3YMR118C SPC1P46965 94 aa2.43□□□□□ -2.02
SHH3YMR118C YLR162WQ06235 118 aa2.43□□□□□ -2.02
SHH3YMR118C YJL133C-AQ3E7A3 74 aa2.43□□□□□ -2.02
SHH3YMR118C YLR307C-AQ3E825 87 aa2.43□□□□□ -2.02
SHH3YMR118C CSF1Q12150 2958 aa2.43□□□□□ -2.02
SHH3YMR118C YAR023CD6VPM8 179 aa2.42□□□□□ -2.02
SHH3YMR118C RPS30AP0CX33 63 aaKnown RBP2.42□□□□□ -2.02
SHH3YMR118C RPS30BP0CX34 63 aaKnown RBP2.42□□□□□ -2.02
SHH3YMR118C LIP1Q03579 150 aa2.42□□□□□ -2.02
SHH3YMR118C YDR115WQ04598 105 aa2.42□□□□□ -2.02
SHH3YMR118C YOR381W-AQ3E804 55 aa2.42□□□□□ -2.02
SHH3YMR118C YGR121W-AQ3E816 71 aa2.42□□□□□ -2.02
SHH3YMR118C Q0032Q9ZZX7 96 aa2.42□□□□□ -2.02
SHH3YMR118C ECM19Q06011 112 aa2.41□□□□□ -2.02
SHH3YMR118C YOR268CQ08734 132 aa2.41□□□□□ -2.02
SHH3YMR118C HOT13P36078 116 aa2.4□□□□□ -2.03
SHH3YMR118C YKL065W-AQ2V2P2 73 aa2.4□□□□□ -2.03
SHH3YMR118C YNL277W-AQ3E7Z0 62 aa2.4□□□□□ -2.03
SHH3YMR118C RRT15Q3E811 62 aa2.4□□□□□ -2.03
SHH3YMR118C IRA2P19158 3079 aa2.4□□□□□ -2.03
SHH3YMR118C TOR2P32600 2474 aaKnown RBP2.39□□□□□ -2.03
SHH3YMR118C RTC6O14464 93 aa2.39□□□□□ -2.03
SHH3YMR118C YEL045CP32616 141 aa2.39□□□□□ -2.03
SHH3YMR118C SPT4P32914 102 aaPredicted RBP2.39□□□□□ -2.03
SHH3YMR118C PEX22P39718 180 aa2.39□□□□□ -2.03
SHH3YMR118C SNA2P56508 79 aa2.39□□□□□ -2.03
SHH3YMR118C YOR072WQ08486 104 aa2.39□□□□□ -2.03
SHH3YMR118C YGL041C-BQ3E750 60 aa2.39□□□□□ -2.03
SHH3YMR118C YGR035W-AQ45U48 73 aa2.39□□□□□ -2.03
SHH3YMR118C YMR122CQ03879 124 aa2.38□□□□□ -2.03
SHH3YMR118C YLL066W-BQ8TGJ7 56 aa2.38□□□□□ -2.03
SHH3YMR118C HHF1P02309 103 aaKnown RBP2.37□□□□□ -2.03
SHH3YMR118C YOL013W-AP0C272 63 aaPredicted RBP2.37□□□□□ -2.03
SHH3YMR118C BSC4P53841 131 aa2.37□□□□□ -2.03
SHH3YMR118C DDR2P89113 61 aa2.37□□□□□ -2.03
SHH3YMR118C YHR007C-AQ07074 71 aa2.37□□□□□ -2.03
SHH3YMR118C MIC10Q96VH5 97 aa2.37□□□□□ -2.03
SHH3YMR118C BPH1P25356 2167 aa2.37□□□□□ -2.03
SHH3YMR118C RPL43AP0CX25 92 aaKnown RBP2.36□□□□□ -2.03
SHH3YMR118C RPL43BP0CX26 92 aa2.36□□□□□ -2.03
SHH3YMR118C OST5Q92316 86 aa2.36□□□□□ -2.03
SHH3YMR118C IRA1P18963 3092 aa2.36□□□□□ -2.03
SHH3YMR118C YER188C-AP0C0V2 99 aa2.35□□□□□ -2.03
SHH3YMR118C YAR064WP39563 99 aa2.35□□□□□ -2.03
SHH3YMR118C YGL193CP53097 103 aa2.35□□□□□ -2.03
SHH3YMR118C SDH6Q3E785 79 aa2.35□□□□□ -2.03
SHH3YMR118C GCN1P33892 2672 aaKnown RBP2.35□□□□□ -2.03
SHH3YMR118C YLR157W-DP0CE99 70 aa2.34□□□□□ -2.03
SHH3YMR118C GIS2P53849 153 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SHH3YMR118C YPR153WQ06537 140 aa2.34□□□□□ -2.03
SHH3YMR118C HUB1Q6Q546 73 aa2.34□□□□□ -2.03
SHH3YMR118C AUA1P32450 94 aa2.33□□□□□ -2.04
SHH3YMR118C YHR125WP38831 101 aa2.33□□□□□ -2.04
SHH3YMR118C YJL197C-AP0C5P0 93 aa2.32□□□□□ -2.04
SHH3YMR118C YCR043CP25361 127 aa2.32□□□□□ -2.04
SHH3YMR118C YDR010CQ12426 110 aa2.32□□□□□ -2.04
SHH3YMR118C YMR001C-AQ8TGS9 76 aa2.32□□□□□ -2.04
SHH3YMR118C YCR095W-AQ3E787 52 aa2.31□□□□□ -2.04
SHH3YMR118C YMR230W-AQ3E7B5 62 aa2.31□□□□□ -2.04
SHH3YMR118C MMS2P53152 137 aa2.29□□□□□ -2.04
SHH3YMR118C URA2P07259 2214 aaKnown RBP2.28□□□□□ -2.04
SHH3YMR118C YBR027CP38220 110 aa2.28□□□□□ -2.04
SHH3YMR118C YDL012CQ12489 107 aa2.28□□□□□ -2.04
SHH3YMR118C YOL097W-AQ3E7Y9 61 aa2.28□□□□□ -2.04
SHH3YMR118C SPG1P50088 95 aa2.27□□□□□ -2.05
SHH3YMR118C YOR376W-AQ3E805 51 aa2.27□□□□□ -2.05
SHH3YMR118C TRA1P38811 3744 aa2.27□□□□□ -2.05
SHH3YMR118C YDR034C-AP0C289 58 aa2.26□□□□□ -2.05
SHH3YMR118C YCL042WP25572 119 aa2.26□□□□□ -2.05
SHH3YMR118C YFR032C-BQ8TGU2 87 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms