RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C DNF2Q12675 1612 aa1.38□□□□□ -2.19
SUB1YMR039C PAU1P0CE88 120 aa1.38□□□□□ -2.19
SUB1YMR039C PAU14P0CE89 120 aa1.38□□□□□ -2.19
SUB1YMR039C YKL065W-AQ2V2P2 73 aa1.38□□□□□ -2.19
SUB1YMR039C COX19Q3E731 98 aa1.38□□□□□ -2.19
SUB1YMR039C NOP10Q6Q547 58 aaPredicted RBP1.38□□□□□ -2.19
SUB1YMR039C QCR9P22289 66 aa1.37□□□□□ -2.19
SUB1YMR039C YHR173CP38864 112 aa1.37□□□□□ -2.19
SUB1YMR039C YMR141CP40211 102 aa1.37□□□□□ -2.19
SUB1YMR039C AIM19P40502 157 aa1.37□□□□□ -2.19
SUB1YMR039C COX12Q01519 83 aa1.37□□□□□ -2.19
SUB1YMR039C YGR035W-AQ45U48 73 aa1.37□□□□□ -2.19
SUB1YMR039C BPH1P25356 2167 aa1.36□□□□□ -2.19
SUB1YMR039C PEP1P32319 1579 aa1.36□□□□□ -2.19
SUB1YMR039C RPL37AP49166 88 aaKnown RBP1.36□□□□□ -2.19
SUB1YMR039C PAU20Q08322 120 aa1.36□□□□□ -2.19
SUB1YMR039C VMA9Q3E7B6 73 aa1.36□□□□□ -2.19
SUB1YMR039C SEC16P48415 2195 aaKnown RBP1.35□□□□□ -2.19
SUB1YMR039C YDL022C-AP0C5L6 82 aa1.35□□□□□ -2.19
SUB1YMR039C LCL1Q02786 101 aa1.35□□□□□ -2.19
SUB1YMR039C YIL102C-AQ2V2P5 75 aa1.35□□□□□ -2.19
SUB1YMR039C YDR246W-AQ3E763 66 aa1.35□□□□□ -2.19
SUB1YMR039C MMS1Q06211 1407 aa1.34□□□□□ -2.19
SUB1YMR039C POL2P21951 2222 aaKnown RBP1.34□□□□□ -2.19
SUB1YMR039C FPR2P32472 135 aa1.34□□□□□ -2.19
SUB1YMR039C SPI1P40092 148 aa1.34□□□□□ -2.19
SUB1YMR039C ERI1P62651 68 aaKnown RBP1.34□□□□□ -2.19
SUB1YMR039C YOR093CQ12275 1648 aa1.33□□□□□ -2.2
SUB1YMR039C YIL086CP40503 102 aa1.32□□□□□ -2.2
SUB1YMR039C YJR128WP47162 119 aa1.32□□□□□ -2.2
SUB1YMR039C HFA1P32874 2273 aa1.32□□□□□ -2.2
SUB1YMR039C SNF2P22082 1703 aa1.32□□□□□ -2.2
SUB1YMR039C VMR1P38735 1592 aa1.31□□□□□ -2.2
SUB1YMR039C YMR122W-AQ3E842 84 aa1.31□□□□□ -2.2
SUB1YMR039C YOR032W-AQ8TGS1 66 aa1.31□□□□□ -2.2
SUB1YMR039C BLM10P43583 2143 aa1.31□□□□□ -2.2
SUB1YMR039C YSY6P38374 65 aa1.3□□□□□ -2.2
SUB1YMR039C SHU1P38751 150 aa1.3□□□□□ -2.2
SUB1YMR039C YNL042W-BQ3E7Z2 85 aa1.3□□□□□ -2.2
SUB1YMR039C RPL43AP0CX25 92 aaKnown RBP1.29□□□□□ -2.2
SUB1YMR039C RPL43BP0CX26 92 aa1.29□□□□□ -2.2
SUB1YMR039C YBR201C-AQ2V2Q3 67 aa1.29□□□□□ -2.2
SUB1YMR039C YKL018C-AQ3E7A7 99 aa1.29□□□□□ -2.2
SUB1YMR039C THO2P53552 1597 aaKnown RBP1.29□□□□□ -2.2
SUB1YMR039C YOR034C-AQ3E735 80 aa1.28□□□□□ -2.2
SUB1YMR039C MLP2P40457 1679 aa1.28□□□□□ -2.2
SUB1YMR039C PAU7P39545 55 aa1.27□□□□□ -2.21
SUB1YMR039C RPL37BP51402 88 aaKnown RBP1.27□□□□□ -2.21
SUB1YMR039C Q0032Q9ZZX7 96 aa1.27□□□□□ -2.21
SUB1YMR039C STU1P38198 1513 aa1.26□□□□□ -2.21
SUB1YMR039C SGF11Q03067 99 aa1.26□□□□□ -2.21
SUB1YMR039C CHC1P22137 1653 aaKnown RBP1.26□□□□□ -2.21
SUB1YMR039C EDC1P53080 175 aaPredicted RBP1.25□□□□□ -2.21
SUB1YMR039C YNL190WP53872 204 aa1.25□□□□□ -2.21
SUB1YMR039C YKL023C-AQ2V2P3 75 aa1.25□□□□□ -2.21
SUB1YMR039C ATP18P81450 59 aa1.24□□□□□ -2.21
SUB1YMR039C ATP17Q06405 101 aa1.24□□□□□ -2.21
SUB1YMR039C KOG1P38873 1557 aa1.23□□□□□ -2.21
SUB1YMR039C RPS30AP0CX33 63 aaKnown RBP1.23□□□□□ -2.21
SUB1YMR039C RPS30BP0CX34 63 aaKnown RBP1.23□□□□□ -2.21
SUB1YMR039C NUP170P38181 1502 aa1.23□□□□□ -2.21
SUB1YMR039C NUP192P47054 1683 aa1.23□□□□□ -2.21
SUB1YMR039C HKR1P41809 1802 aa1.22□□□□□ -2.21
SUB1YMR039C URA2P07259 2214 aaKnown RBP1.22□□□□□ -2.21
SUB1YMR039C COX7P10174 60 aa1.22□□□□□ -2.21
SUB1YMR039C YDR182W-AQ3E796 67 aa1.22□□□□□ -2.21
SUB1YMR039C YBR072C-AQ3E794 53 aa1.2□□□□□ -2.22
SUB1YMR039C YLR307C-AQ3E825 87 aa1.2□□□□□ -2.22
SUB1YMR039C YOL166W-AQ8TGJ1 51 aa1.2□□□□□ -2.22
SUB1YMR039C RKR1Q04781 1562 aa1.19□□□□□ -2.22
SUB1YMR039C SDH6Q3E785 79 aa1.19□□□□□ -2.22
SUB1YMR039C YOL097W-AQ3E7Y9 61 aa1.19□□□□□ -2.22
SUB1YMR039C YLR157W-EP0CF00 54 aa1.18□□□□□ -2.22
SUB1YMR039C AUA1P32450 94 aa1.18□□□□□ -2.22
SUB1YMR039C YOR192C-CQ3E736 78 aa1.18□□□□□ -2.22
SUB1YMR039C PDR15Q04182 1529 aaKnown RBP1.18□□□□□ -2.22
SUB1YMR039C RPC10P40422 70 aa1.17□□□□□ -2.22
SUB1YMR039C YPR108W-AQ3E7B3 70 aa1.17□□□□□ -2.22
SUB1YMR039C HIR3P47171 1648 aa1.17□□□□□ -2.22
SUB1YMR039C HUB1Q6Q546 73 aa1.16□□□□□ -2.22
SUB1YMR039C RPL38P49167 78 aaKnown RBP1.15□□□□□ -2.23
SUB1YMR039C BUD3P25558 1636 aa1.15□□□□□ -2.23
SUB1YMR039C ATG2P53855 1592 aa1.13□□□□□ -2.23
SUB1YMR039C FIG2P25653 1609 aa1.12□□□□□ -2.23
SUB1YMR039C YBL039W-BP0C268 59 aa1.12□□□□□ -2.23
SUB1YMR039C GCN2P15442 1659 aa1.11□□□□□ -2.23
SUB1YMR039C YJR107C-AP0CT86 78 aa1.11□□□□□ -2.23
SUB1YMR039C YBR032WP38223 100 aa1.11□□□□□ -2.23
SUB1YMR039C YLR146W-AQ2V2P1 62 aa1.11□□□□□ -2.23
SUB1YMR039C YBR200W-AQ3E755 54 aa1.11□□□□□ -2.23
SUB1YMR039C YLR157W-DP0CE99 70 aa1.1□□□□□ -2.23
SUB1YMR039C YMR001C-AQ8TGS9 76 aa1.1□□□□□ -2.23
SUB1YMR039C RPS27AP35997 82 aaKnown RBP1.09□□□□□ -2.23
SUB1YMR039C SMX2P40204 77 aaKnown RBP1.08□□□□□ -2.24
SUB1YMR039C YOR011W-AQ3E807 68 aa1.08□□□□□ -2.24
SUB1YMR039C YOR394C-AQ8TGJ0 55 aa1.07□□□□□ -2.24
SUB1YMR039C YOL164W-AQ3E7A5 60 aa1.06□□□□□ -2.24
SUB1YMR039C YBR016WP38216 128 aa1.01□□□□□ -2.25
SUB1YMR039C YGR025WP53216 100 aa1.01□□□□□ -2.25
SUB1YMR039C OLI1P61829 76 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms