RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W UTP10P42945 1769 aaKnown RBP0.65□□□□□ -2.3
CTK3YML112W DNF2Q12675 1612 aa0.65□□□□□ -2.31
CTK3YML112W FPR2P32472 135 aa0.65□□□□□ -2.31
CTK3YML112W YGL041C-BQ3E750 60 aa0.65□□□□□ -2.31
CTK3YML112W YMR122W-AQ3E842 84 aa0.65□□□□□ -2.31
CTK3YML112W CDC39P25655 2108 aaKnown RBP0.64□□□□□ -2.31
CTK3YML112W AIM19P40502 157 aa0.64□□□□□ -2.31
CTK3YML112W EDC1P53080 175 aaPredicted RBP0.64□□□□□ -2.31
CTK3YML112W YKL018C-AQ3E7A7 99 aa0.64□□□□□ -2.31
CTK3YML112W YNL042W-BQ3E7Z2 85 aa0.64□□□□□ -2.31
CTK3YML112W SPO14P36126 1683 aa0.64□□□□□ -2.31
CTK3YML112W URB1P34241 1764 aaKnown RBP0.63□□□□□ -2.31
CTK3YML112W YBT1P32386 1661 aa0.63□□□□□ -2.31
CTK3YML112W IML1P47170 1584 aa0.63□□□□□ -2.31
CTK3YML112W YSY6P38374 65 aa0.63□□□□□ -2.31
CTK3YML112W YOR034C-AQ3E735 80 aa0.63□□□□□ -2.31
CTK3YML112W STU1P38198 1513 aa0.63□□□□□ -2.31
CTK3YML112W KOG1P38873 1557 aa0.62□□□□□ -2.31
CTK3YML112W YOL013W-AP0C272 63 aaPredicted RBP0.62□□□□□ -2.31
CTK3YML112W YIL086CP40503 102 aa0.62□□□□□ -2.31
CTK3YML112W YJL009WP47078 108 aa0.62□□□□□ -2.31
CTK3YML112W YNL190WP53872 204 aa0.62□□□□□ -2.31
CTK3YML112W YBR201C-AQ2V2Q3 67 aa0.62□□□□□ -2.31
CTK3YML112W YOL166W-AQ8TGJ1 51 aa0.62□□□□□ -2.31
CTK3YML112W YOR093CQ12275 1648 aa0.62□□□□□ -2.31
CTK3YML112W NUP170P38181 1502 aa0.62□□□□□ -2.31
CTK3YML112W NUP188P52593 1655 aaKnown RBP0.62□□□□□ -2.31
CTK3YML112W MOT1P32333 1867 aa0.61□□□□□ -2.31
CTK3YML112W YCR001WP25347 104 aa0.61□□□□□ -2.31
CTK3YML112W SHU1P38751 150 aa0.61□□□□□ -2.31
CTK3YML112W MVB12P42939 101 aa0.61□□□□□ -2.31
CTK3YML112W YKL023C-AQ2V2P3 75 aa0.61□□□□□ -2.31
CTK3YML112W YOR192C-CQ3E736 78 aa0.61□□□□□ -2.31
CTK3YML112W HUG1Q6Q5K6 68 aa0.61□□□□□ -2.31
CTK3YML112W RIM15P43565 1770 aa0.6□□□□□ -2.31
CTK3YML112W RPS30AP0CX33 63 aaKnown RBP0.6□□□□□ -2.31
CTK3YML112W RPS30BP0CX34 63 aaKnown RBP0.6□□□□□ -2.31
CTK3YML112W PAU7P39545 55 aa0.6□□□□□ -2.31
CTK3YML112W YAR064WP39563 99 aa0.6□□□□□ -2.31
CTK3YML112W Q0032Q9ZZX7 96 aa0.6□□□□□ -2.31
CTK3YML112W SEC16P48415 2195 aaKnown RBP0.6□□□□□ -2.31
CTK3YML112W VMR1P38735 1592 aa0.59□□□□□ -2.31
CTK3YML112W AUA1P32450 94 aa0.59□□□□□ -2.31
CTK3YML112W YJR128WP47162 119 aa0.59□□□□□ -2.31
CTK3YML112W ATP17Q06405 101 aa0.59□□□□□ -2.31
CTK3YML112W YOR072WQ08486 104 aa0.59□□□□□ -2.31
CTK3YML112W YDR182W-AQ3E796 67 aa0.59□□□□□ -2.31
CTK3YML112W MLP2P40457 1679 aa0.59□□□□□ -2.32
CTK3YML112W THO2P53552 1597 aaKnown RBP0.58□□□□□ -2.32
CTK3YML112W BPH1P25356 2167 aa0.58□□□□□ -2.32
CTK3YML112W BRR2P32639 2163 aaKnown RBP0.58□□□□□ -2.32
CTK3YML112W ATP18P81450 59 aa0.58□□□□□ -2.32
CTK3YML112W YIL102CP40488 101 aa0.57□□□□□ -2.32
CTK3YML112W SGF11Q03067 99 aa0.57□□□□□ -2.32
CTK3YML112W USO1P25386 1790 aa0.57□□□□□ -2.32
CTK3YML112W FIG2P25653 1609 aa0.56□□□□□ -2.32
CTK3YML112W CHC1P22137 1653 aaKnown RBP0.56□□□□□ -2.32
CTK3YML112W PDR15Q04182 1529 aaKnown RBP0.56□□□□□ -2.32
CTK3YML112W COX7P10174 60 aa0.56□□□□□ -2.32
CTK3YML112W HHY1P39982 102 aa0.56□□□□□ -2.32
CTK3YML112W SMX2P40204 77 aaKnown RBP0.56□□□□□ -2.32
CTK3YML112W RPC10P40422 70 aa0.56□□□□□ -2.32
CTK3YML112W POL2P21951 2222 aaKnown RBP0.56□□□□□ -2.32
CTK3YML112W SNF2P22082 1703 aa0.55□□□□□ -2.32
CTK3YML112W RPS27AP35997 82 aaKnown RBP0.55□□□□□ -2.32
CTK3YML112W YBR200W-AQ3E755 54 aa0.55□□□□□ -2.32
CTK3YML112W SDH6Q3E785 79 aa0.55□□□□□ -2.32
CTK3YML112W RKR1Q04781 1562 aa0.54□□□□□ -2.32
CTK3YML112W YPR108W-AQ3E7B3 70 aa0.54□□□□□ -2.32
CTK3YML112W YOL097W-AQ3E7Y9 61 aa0.54□□□□□ -2.32
CTK3YML112W BLM10P43583 2143 aa0.53□□□□□ -2.32
CTK3YML112W NUP192P47054 1683 aa0.53□□□□□ -2.32
CTK3YML112W YBL039W-BP0C268 59 aa0.53□□□□□ -2.32
CTK3YML112W YMR141CP40211 102 aa0.53□□□□□ -2.32
CTK3YML112W ATG2P53855 1592 aa0.53□□□□□ -2.33
CTK3YML112W HFA1P32874 2273 aa0.52□□□□□ -2.33
CTK3YML112W RPL43AP0CX25 92 aaKnown RBP0.52□□□□□ -2.33
CTK3YML112W RPL43BP0CX26 92 aa0.52□□□□□ -2.33
CTK3YML112W YOR011W-AQ3E807 68 aa0.52□□□□□ -2.33
CTK3YML112W HUB1Q6Q546 73 aa0.52□□□□□ -2.33
CTK3YML112W YMR001C-AQ8TGS9 76 aa0.52□□□□□ -2.33
CTK3YML112W YLR157W-DP0CE99 70 aa0.51□□□□□ -2.33
CTK3YML112W YJR107C-AP0CT86 78 aa0.51□□□□□ -2.33
CTK3YML112W GCN2P15442 1659 aa0.51□□□□□ -2.33
CTK3YML112W YBR032WP38223 100 aa0.51□□□□□ -2.33
CTK3YML112W HIR3P47171 1648 aa0.51□□□□□ -2.33
CTK3YML112W RPL38P49167 78 aaKnown RBP0.51□□□□□ -2.33
CTK3YML112W YBR072C-AQ3E794 53 aa0.51□□□□□ -2.33
CTK3YML112W YOR394C-AQ8TGJ0 55 aa0.51□□□□□ -2.33
CTK3YML112W YHR213W-BQ8TGK1 99 aa0.51□□□□□ -2.33
CTK3YML112W HKR1P41809 1802 aa0.5□□□□□ -2.33
CTK3YML112W BUD3P25558 1636 aa0.5□□□□□ -2.33
CTK3YML112W YBR016WP38216 128 aa0.5□□□□□ -2.33
CTK3YML112W RPS27BP38711 82 aa0.5□□□□□ -2.33
CTK3YML112W URA2P07259 2214 aaKnown RBP0.5□□□□□ -2.33
CTK3YML112W PRP8P33334 2413 aaKnown RBP0.49□□□□□ -2.33
CTK3YML112W YLR157W-EP0CF00 54 aa0.49□□□□□ -2.33
CTK3YML112W YLR146W-AQ2V2P1 62 aa0.49□□□□□ -2.33
CTK3YML112W YLR307C-AQ3E825 87 aa0.48□□□□□ -2.33
CTK3YML112W YPR010C-AA5Z2X5 72 aa0.47□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms