RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W POR2P40478 281 aa6.53□□□□□ -1.36
SFP1YLR403W YSF3P0C074 85 aaPredicted RBP6.52□□□□□ -1.37
SFP1YLR403W BEM2P39960 2167 aaKnown RBP6.52□□□□□ -1.37
SFP1YLR403W YIL102CP40488 101 aa6.51□□□□□ -1.37
SFP1YLR403W TMC1Q08422 150 aaPredicted RBP6.51□□□□□ -1.37
SFP1YLR403W YJL197C-AP0C5P0 93 aa6.5□□□□□ -1.37
SFP1YLR403W YPL278CQ08990 100 aa6.5□□□□□ -1.37
SFP1YLR403W YGL149WP53116 101 aa6.49□□□□□ -1.37
SFP1YLR403W YDL241WQ07738 123 aa6.49□□□□□ -1.37
SFP1YLR403W YER175W-AQ8TGU4 54 aa6.49□□□□□ -1.37
SFP1YLR403W YPR013CQ12145 317 aa6.48□□□□□ -1.37
SFP1YLR403W SNA2P56508 79 aa6.48□□□□□ -1.37
SFP1YLR403W SEC16P48415 2195 aaKnown RBP6.47□□□□□ -1.37
SFP1YLR403W RTC6O14464 93 aa6.46□□□□□ -1.37
SFP1YLR403W CCW12Q12127 133 aa6.46□□□□□ -1.37
SFP1YLR403W HUB1Q6Q546 73 aa6.46□□□□□ -1.37
SFP1YLR403W BSC4P53841 131 aa6.46□□□□□ -1.38
SFP1YLR403W YBR219CP38317 127 aa6.45□□□□□ -1.38
SFP1YLR403W YPR010C-AA5Z2X5 72 aa6.45□□□□□ -1.38
SFP1YLR403W YEL008WP40001 126 aa6.44□□□□□ -1.38
SFP1YLR403W ACC1Q00955 2233 aaKnown RBP6.44□□□□□ -1.38
SFP1YLR403W YDR114CQ04597 100 aa6.43□□□□□ -1.38
SFP1YLR403W ECM19Q06011 112 aa6.42□□□□□ -1.38
SFP1YLR403W AQY2P0CD90 149 aa6.41□□□□□ -1.38
SFP1YLR403W YLR157W-DP0CE99 70 aa6.4□□□□□ -1.39
SFP1YLR403W YCR001WP25347 104 aa6.4□□□□□ -1.39
SFP1YLR403W YLL006W-AQ3E814 58 aa6.39□□□□□ -1.39
SFP1YLR403W ATP17Q06405 101 aa6.38□□□□□ -1.39
SFP1YLR403W YMR001C-AQ8TGS9 76 aa6.38□□□□□ -1.39
SFP1YLR403W YOL085CQ99345 113 aa6.38□□□□□ -1.39
SFP1YLR403W YCR041WP37265 110 aa6.37□□□□□ -1.39
SFP1YLR403W IGD1P43598 195 aa6.37□□□□□ -1.39
SFP1YLR403W YBR200W-AQ3E755 54 aa6.37□□□□□ -1.39
SFP1YLR403W YMR122W-AQ3E842 84 aa6.37□□□□□ -1.39
SFP1YLR403W RPS27AP35997 82 aaKnown RBP6.36□□□□□ -1.39
SFP1YLR403W RPS27BP38711 82 aa6.36□□□□□ -1.39
SFP1YLR403W YGR025WP53216 100 aa6.36□□□□□ -1.39
SFP1YLR403W SDH6Q3E785 79 aa6.35□□□□□ -1.39
SFP1YLR403W YOL013W-AP0C272 63 aaPredicted RBP6.35□□□□□ -1.39
SFP1YLR403W FAB1P34756 2278 aa6.35□□□□□ -1.39
SFP1YLR403W LCL2Q08045 131 aa6.34□□□□□ -1.39
SFP1YLR403W COX14P39103 70 aa6.33□□□□□ -1.4
SFP1YLR403W SIP18P50263 79 aa6.32□□□□□ -1.4
SFP1YLR403W MRP10O75012 95 aa6.3□□□□□ -1.4
SFP1YLR403W POL2P21951 2222 aaKnown RBP6.3□□□□□ -1.4
SFP1YLR403W YBR027CP38220 110 aa6.29□□□□□ -1.4
SFP1YLR403W YNL122CP53921 115 aaPredicted RBP6.27□□□□□ -1.41
SFP1YLR403W VAM10Q08474 114 aa6.26□□□□□ -1.41
SFP1YLR403W YER078W-AQ3E7A2 54 aa6.26□□□□□ -1.41
SFP1YLR403W FPR1P20081 114 aaKnown RBP6.25□□□□□ -1.41
SFP1YLR403W YHR125WP38831 101 aa6.25□□□□□ -1.41
SFP1YLR403W YHR213W-BQ8TGK1 99 aa6.24□□□□□ -1.41
SFP1YLR403W YGL014C-AP0C5N1 53 aa6.23□□□□□ -1.41
SFP1YLR403W YKR073CP36153 106 aa6.22□□□□□ -1.41
SFP1YLR403W YCL048W-AQ2V2Q2 79 aa6.22□□□□□ -1.41
SFP1YLR403W SGF11Q03067 99 aa6.2□□□□□ -1.42
SFP1YLR403W YJL133C-AQ3E7A3 74 aa6.19□□□□□ -1.42
SFP1YLR403W Q0032Q9ZZX7 96 aa6.18□□□□□ -1.42
SFP1YLR403W CMC4Q3E7A9 73 aa6.16□□□□□ -1.42
SFP1YLR403W YMR105W-AQ8TGS8 64 aa6.16□□□□□ -1.42
SFP1YLR403W AUA1P32450 94 aa6.14□□□□□ -1.43
SFP1YLR403W YER084WP40057 128 aa6.14□□□□□ -1.43
SFP1YLR403W YDR210WQ03482 75 aa6.14□□□□□ -1.43
SFP1YLR403W RPL29P05747 59 aaPredicted RBP6.11□□□□□ -1.43
SFP1YLR403W YNL162W-AQ3E7A8 72 aa6.08□□□□□ -1.44
SFP1YLR403W RPL39P04650 51 aa6.06□□□□□ -1.44
SFP1YLR403W YBL039W-BP0C268 59 aa6.06□□□□□ -1.44
SFP1YLR403W PMP3P87284 55 aa6.05□□□□□ -1.44
SFP1YLR403W YDL012CQ12489 107 aa6.05□□□□□ -1.44
SFP1YLR403W YEL014CP39999 101 aa6.04□□□□□ -1.44
SFP1YLR403W MVB12P42939 101 aa6.03□□□□□ -1.44
SFP1YLR403W YBR230W-AQ3E762 66 aa6.03□□□□□ -1.44
SFP1YLR403W YAR064WP39563 99 aa6.02□□□□□ -1.45
SFP1YLR403W YOR011W-AQ3E807 68 aa6.02□□□□□ -1.45
SFP1YLR403W YIL046W-AQ3E7Z4 54 aa6.02□□□□□ -1.45
SFP1YLR403W YJL127C-BQ3E828 52 aa6.01□□□□□ -1.45
SFP1YLR403W COX8P04039 78 aa5.98□□□□□ -1.45
SFP1YLR403W YIL086CP40503 102 aa5.98□□□□□ -1.45
SFP1YLR403W YNL146C-AQ3E7Z1 64 aa5.97□□□□□ -1.45
SFP1YLR403W YBR201C-AQ2V2Q3 67 aa5.97□□□□□ -1.45
SFP1YLR403W YDR115WQ04598 105 aa5.95□□□□□ -1.46
SFP1YLR403W YHR032W-AP0C5N6 59 aa5.94□□□□□ -1.46
SFP1YLR403W YCL042WP25572 119 aa5.94□□□□□ -1.46
SFP1YLR403W URA2P07259 2214 aaKnown RBP5.94□□□□□ -1.46
SFP1YLR403W YPR195CQ06594 109 aa5.93□□□□□ -1.46
SFP1YLR403W YLR307C-AQ3E825 87 aa5.92□□□□□ -1.46
SFP1YLR403W DDR2P89113 61 aa5.9□□□□□ -1.47
SFP1YLR403W YOL097W-AQ3E7Y9 61 aa5.9□□□□□ -1.47
SFP1YLR403W YOR072WQ08486 104 aa5.87□□□□□ -1.47
SFP1YLR403W YLR255CO13574 117 aa5.85□□□□□ -1.47
SFP1YLR403W YJR085CP47131 105 aaKnown RBP5.85□□□□□ -1.47
SFP1YLR403W YDR524C-BQ3E6R4 66 aa5.84□□□□□ -1.47
SFP1YLR403W YGL041C-BQ3E750 60 aa5.81□□□□□ -1.48
SFP1YLR403W YHR007C-AQ07074 71 aa5.81□□□□□ -1.48
SFP1YLR403W RPL43AP0CX25 92 aaKnown RBP5.8□□□□□ -1.48
SFP1YLR403W RPL43BP0CX26 92 aa5.8□□□□□ -1.48
SFP1YLR403W YLR122CQ12312 125 aa5.78□□□□□ -1.48
SFP1YLR403W HOR7Q05827 59 aa5.76□□□□□ -1.49
SFP1YLR403W RPC10P40422 70 aa5.75□□□□□ -1.49
SFP1YLR403W YJR128WP47162 119 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms