RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	FPR2	P32472	135 aa		0.91	□□□□□ -2.26
HRT3	YLR097C	YHR173C	P38864	112 aa		0.91	□□□□□ -2.26
HRT3	YLR097C	PAU20	Q08322	120 aa		0.91	□□□□□ -2.26
HRT3	YLR097C	COX19	Q3E731	98 aa		0.91	□□□□□ -2.26
HRT3	YLR097C	YGR121W-A	Q3E816	71 aa		0.91	□□□□□ -2.26
HRT3	YLR097C	IML1	P47170	1584 aa		0.91	□□□□□ -2.26
HRT3	YLR097C	VTH1	P40438	1549 aa		0.9	□□□□□ -2.26
HRT3	YLR097C	VTH2	P40890	1549 aa		0.9	□□□□□ -2.26
HRT3	YLR097C	MRPS12	P53732	153 aa		0.9	□□□□□ -2.27
HRT3	YLR097C	YDR210W	Q03482	75 aa		0.9	□□□□□ -2.27
HRT3	YLR097C	NOP10	Q6Q547	58 aa	Predicted RBP	0.9	□□□□□ -2.27
HRT3	YLR097C	SPT6	P23615	1451 aa	Known RBP	0.9	□□□□□ -2.27
HRT3	YLR097C	YBT1	P32386	1661 aa		0.9	□□□□□ -2.27
HRT3	YLR097C	MMS1	Q06211	1407 aa		0.89	□□□□□ -2.27
HRT3	YLR097C	BLM10	P43583	2143 aa		0.89	□□□□□ -2.27
HRT3	YLR097C	URA2	P07259	2214 aa	Known RBP	0.89	□□□□□ -2.27
HRT3	YLR097C	CDC25	P04821	1589 aa		0.89	□□□□□ -2.27
HRT3	YLR097C	RPS11A	P0CX47	156 aa	Known RBP	0.89	□□□□□ -2.27
HRT3	YLR097C	RPS11B	P0CX48	156 aa	Known RBP	0.89	□□□□□ -2.27
HRT3	YLR097C	YSY6	P38374	65 aa		0.89	□□□□□ -2.27
HRT3	YLR097C	PAU7	P39545	55 aa		0.89	□□□□□ -2.27
HRT3	YLR097C	YIL156W-B	Q2V2P4	73 aa		0.89	□□□□□ -2.27
HRT3	YLR097C	BCK1	Q01389	1478 aa		0.88	□□□□□ -2.27
HRT3	YLR097C	YLR255C	O13574	117 aa		0.88	□□□□□ -2.27
HRT3	YLR097C	SPI1	P40092	148 aa		0.88	□□□□□ -2.27
HRT3	YLR097C	YIL086C	P40503	102 aa		0.88	□□□□□ -2.27
HRT3	YLR097C	YGR035W-A	Q45U48	73 aa		0.88	□□□□□ -2.27
HRT3	YLR097C	IRC20	Q06554	1556 aa		0.87	□□□□□ -2.27
HRT3	YLR097C	POL2	P21951	2222 aa	Known RBP	0.87	□□□□□ -2.27
HRT3	YLR097C	ULS1	Q08562	1619 aa		0.87	□□□□□ -2.27
HRT3	YLR097C	SHU1	P38751	150 aa		0.87	□□□□□ -2.27
HRT3	YLR097C	ERI1	P62651	68 aa	Known RBP	0.87	□□□□□ -2.27
HRT3	YLR097C	SGF11	Q03067	99 aa		0.87	□□□□□ -2.27
HRT3	YLR097C	YNL042W-B	Q3E7Z2	85 aa		0.87	□□□□□ -2.27
HRT3	YLR097C	TY3B-G	Q99315	1547 aa		0.87	□□□□□ -2.27
HRT3	YLR097C	SEC16	P48415	2195 aa	Known RBP	0.87	□□□□□ -2.27
HRT3	YLR097C	PEP1	P32319	1579 aa		0.87	□□□□□ -2.27
HRT3	YLR097C	DNF2	Q12675	1612 aa		0.86	□□□□□ -2.27
HRT3	YLR097C	YDL022C-A	P0C5L6	82 aa		0.86	□□□□□ -2.27
HRT3	YLR097C	LCL1	Q02786	101 aa		0.86	□□□□□ -2.27
HRT3	YLR097C	YKL023C-A	Q2V2P3	75 aa		0.86	□□□□□ -2.27
HRT3	YLR097C	ARO1	P08566	1588 aa	Known RBP	0.86	□□□□□ -2.27
HRT3	YLR097C	DNF3	Q12674	1656 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	ATP18	P81450	59 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	ATP17	Q06405	101 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	YBR201C-A	Q2V2Q3	67 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	YDR246W-A	Q3E763	66 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	YKL018C-A	Q3E7A7	99 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	YMR122W-A	Q3E842	84 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	YOR032W-A	Q8TGS1	66 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	Q0032	Q9ZZX7	96 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	YOR093C	Q12275	1648 aa		0.85	□□□□□ -2.27
HRT3	YLR097C	NUP188	P52593	1655 aa	Known RBP	0.84	□□□□□ -2.27
HRT3	YLR097C	YDR182W-A	Q3E796	67 aa		0.84	□□□□□ -2.27
HRT3	YLR097C	YOL097W-A	Q3E7Y9	61 aa		0.84	□□□□□ -2.27
HRT3	YLR097C	HUB1	Q6Q546	73 aa		0.84	□□□□□ -2.27
HRT3	YLR097C	STU1	P38198	1513 aa		0.84	□□□□□ -2.28
HRT3	YLR097C	VMR1	P38735	1592 aa		0.83	□□□□□ -2.28
HRT3	YLR097C	RPS30A	P0CX33	63 aa	Known RBP	0.83	□□□□□ -2.28
HRT3	YLR097C	RPS30B	P0CX34	63 aa	Known RBP	0.83	□□□□□ -2.28
HRT3	YLR097C	COX7	P10174	60 aa		0.83	□□□□□ -2.28
HRT3	YLR097C	YNL190W	P53872	204 aa		0.83	□□□□□ -2.28
HRT3	YLR097C	SDH6	Q3E785	79 aa		0.83	□□□□□ -2.28
HRT3	YLR097C	SNF2	P22082	1703 aa		0.83	□□□□□ -2.28
HRT3	YLR097C	THO2	P53552	1597 aa	Known RBP	0.83	□□□□□ -2.28
HRT3	YLR097C	NUP170	P38181	1502 aa		0.81	□□□□□ -2.28
HRT3	YLR097C	CHC1	P22137	1653 aa	Known RBP	0.81	□□□□□ -2.28
HRT3	YLR097C	MLP2	P40457	1679 aa		0.81	□□□□□ -2.28
HRT3	YLR097C	RKR1	Q04781	1562 aa		0.8	□□□□□ -2.28
HRT3	YLR097C	RPL38	P49167	78 aa	Known RBP	0.8	□□□□□ -2.28
HRT3	YLR097C	EDC1	P53080	175 aa	Predicted RBP	0.8	□□□□□ -2.28
HRT3	YLR097C	YLR146W-A	Q2V2P1	62 aa		0.8	□□□□□ -2.28
HRT3	YLR097C	YPR108W-A	Q3E7B3	70 aa		0.8	□□□□□ -2.28
HRT3	YLR097C	NUP192	P47054	1683 aa		0.79	□□□□□ -2.28
HRT3	YLR097C	YJR107C-A	P0CT86	78 aa		0.79	□□□□□ -2.28
HRT3	YLR097C	YBR072C-A	Q3E794	53 aa		0.79	□□□□□ -2.28
HRT3	YLR097C	YOL166W-A	Q8TGJ1	51 aa		0.79	□□□□□ -2.28
HRT3	YLR097C	PDR15	Q04182	1529 aa	Known RBP	0.79	□□□□□ -2.28
HRT3	YLR097C	KOG1	P38873	1557 aa		0.79	□□□□□ -2.28
HRT3	YLR097C	HKR1	P41809	1802 aa		0.78	□□□□□ -2.28
HRT3	YLR097C	YBL039W-B	P0C268	59 aa		0.78	□□□□□ -2.28
HRT3	YLR097C	YLR157W-D	P0CE99	70 aa		0.78	□□□□□ -2.28
HRT3	YLR097C	YBR032W	P38223	100 aa		0.78	□□□□□ -2.28
HRT3	YLR097C	SMX2	P40204	77 aa	Known RBP	0.78	□□□□□ -2.28
HRT3	YLR097C	YOR192C-C	Q3E736	78 aa		0.78	□□□□□ -2.28
HRT3	YLR097C	YMR001C-A	Q8TGS9	76 aa		0.78	□□□□□ -2.28
HRT3	YLR097C	AUA1	P32450	94 aa		0.77	□□□□□ -2.29
HRT3	YLR097C	RPC10	P40422	70 aa		0.77	□□□□□ -2.29
HRT3	YLR097C	YBR200W-A	Q3E755	54 aa		0.76	□□□□□ -2.29
HRT3	YLR097C	YOR011W-A	Q3E807	68 aa		0.76	□□□□□ -2.29
HRT3	YLR097C	HIR3	P47171	1648 aa		0.75	□□□□□ -2.29
HRT3	YLR097C	RPS29B	P41058	56 aa	Known RBP	0.75	□□□□□ -2.29
HRT3	YLR097C	OLI1	P61829	76 aa		0.75	□□□□□ -2.29
HRT3	YLR097C	YGR025W	P53216	100 aa		0.74	□□□□□ -2.29
HRT3	YLR097C	YOR394C-A	Q8TGJ0	55 aa		0.74	□□□□□ -2.29
HRT3	YLR097C	BUD3	P25558	1636 aa		0.73	□□□□□ -2.29
HRT3	YLR097C	ATG2	P53855	1592 aa		0.73	□□□□□ -2.29
HRT3	YLR097C	RPS27A	P35997	82 aa	Known RBP	0.71	□□□□□ -2.3
HRT3	YLR097C	YBR230W-A	Q3E762	66 aa		0.71	□□□□□ -2.3
HRT3	YLR097C	GCN2	P15442	1659 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms