RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W DNF3Q12674 1656 aa0.87□□□□□ -2.27
MSA2YKR077W ERI1P62651 68 aaKnown RBP0.86□□□□□ -2.27
MSA2YKR077W YBR201C-AQ2V2Q3 67 aa0.86□□□□□ -2.27
MSA2YKR077W YOR034C-AQ3E735 80 aa0.86□□□□□ -2.27
MSA2YKR077W YDR246W-AQ3E763 66 aa0.86□□□□□ -2.27
MSA2YKR077W VMA9Q3E7B6 73 aa0.86□□□□□ -2.27
MSA2YKR077W YIL134C-AQ45U18 67 aa0.86□□□□□ -2.27
MSA2YKR077W YIL102C-AQ2V2P5 75 aa0.85□□□□□ -2.27
MSA2YKR077W Q0032Q9ZZX7 96 aa0.85□□□□□ -2.27
MSA2YKR077W URA2P07259 2214 aaKnown RBP0.85□□□□□ -2.27
MSA2YKR077W IML1P47170 1584 aa0.84□□□□□ -2.27
MSA2YKR077W TY2B-LR1P0C2J3 1770 aa0.84□□□□□ -2.27
MSA2YKR077W TY2B-FP0CX63 1770 aa0.84□□□□□ -2.27
MSA2YKR077W TY2B-GR2P0CX64 1770 aa0.84□□□□□ -2.27
MSA2YKR077W TY2B-DR2Q03494 1770 aa0.84□□□□□ -2.27
MSA2YKR077W TY2B-OR1Q12113 1770 aa0.84□□□□□ -2.27
MSA2YKR077W TY2B-BQ12491 1770 aa0.84□□□□□ -2.27
MSA2YKR077W TY2B-OR2Q12501 1770 aa0.84□□□□□ -2.27
MSA2YKR077W YSY6P38374 65 aa0.84□□□□□ -2.27
MSA2YKR077W SGF11Q03067 99 aa0.84□□□□□ -2.27
MSA2YKR077W YOR032W-AQ8TGS1 66 aa0.84□□□□□ -2.27
MSA2YKR077W PDR5P33302 1511 aaKnown RBP0.84□□□□□ -2.28
MSA2YKR077W YCF1P39109 1515 aaKnown RBP0.84□□□□□ -2.28
MSA2YKR077W BLM10P43583 2143 aa0.83□□□□□ -2.28
MSA2YKR077W ARO1P08566 1588 aaKnown RBP0.83□□□□□ -2.28
MSA2YKR077W TY2B-DR3Q07791 1770 aaKnown RBP0.83□□□□□ -2.28
MSA2YKR077W COX7P10174 60 aa0.83□□□□□ -2.28
MSA2YKR077W PAU7P39545 55 aa0.83□□□□□ -2.28
MSA2YKR077W ATP18P81450 59 aa0.83□□□□□ -2.28
MSA2YKR077W YKL018C-AQ3E7A7 99 aa0.83□□□□□ -2.28
MSA2YKR077W RPO21P04050 1733 aaKnown RBP0.83□□□□□ -2.28
MSA2YKR077W HAP1P0CE41 1502 aa0.83□□□□□ -2.28
MSA2YKR077W SNQ2P32568 1501 aaKnown RBP0.83□□□□□ -2.28
MSA2YKR077W DNF2Q12675 1612 aa0.82□□□□□ -2.28
MSA2YKR077W MMS1Q06211 1407 aa0.82□□□□□ -2.28
MSA2YKR077W SPT6P23615 1451 aaKnown RBP0.82□□□□□ -2.28
MSA2YKR077W APC1P53886 1748 aa0.82□□□□□ -2.28
MSA2YKR077W ATP17Q06405 101 aa0.82□□□□□ -2.28
MSA2YKR077W TY3B-GQ99315 1547 aa0.82□□□□□ -2.28
MSA2YKR077W VTH1P40438 1549 aa0.81□□□□□ -2.28
MSA2YKR077W VTH2P40890 1549 aa0.81□□□□□ -2.28
MSA2YKR077W AUA1P32450 94 aa0.81□□□□□ -2.28
MSA2YKR077W YNL190WP53872 204 aa0.81□□□□□ -2.28
MSA2YKR077W YOL097W-AQ3E7Y9 61 aa0.81□□□□□ -2.28
MSA2YKR077W CDC25P04821 1589 aa0.81□□□□□ -2.28
MSA2YKR077W SPO14P36126 1683 aa0.81□□□□□ -2.28
MSA2YKR077W BCK1Q01389 1478 aa0.8□□□□□ -2.28
MSA2YKR077W YBR072C-AQ3E794 53 aa0.8□□□□□ -2.28
MSA2YKR077W RIM15P43565 1770 aa0.8□□□□□ -2.28
MSA2YKR077W RPC10P40422 70 aa0.79□□□□□ -2.28
MSA2YKR077W SDH6Q3E785 79 aa0.79□□□□□ -2.28
MSA2YKR077W YDR182W-AQ3E796 67 aa0.79□□□□□ -2.28
MSA2YKR077W SSK2P53599 1579 aa0.79□□□□□ -2.28
MSA2YKR077W RPS30AP0CX33 63 aaKnown RBP0.78□□□□□ -2.28
MSA2YKR077W RPS30BP0CX34 63 aaKnown RBP0.78□□□□□ -2.28
MSA2YKR077W RPL38P49167 78 aaKnown RBP0.78□□□□□ -2.28
MSA2YKR077W EDC1P53080 175 aaPredicted RBP0.78□□□□□ -2.28
MSA2YKR077W YKL023C-AQ2V2P3 75 aa0.78□□□□□ -2.28
MSA2YKR077W YPR108W-AQ3E7B3 70 aa0.78□□□□□ -2.28
MSA2YKR077W HUB1Q6Q546 73 aa0.77□□□□□ -2.29
MSA2YKR077W VMR1P38735 1592 aa0.76□□□□□ -2.29
MSA2YKR077W YJR107C-AP0CT86 78 aa0.76□□□□□ -2.29
MSA2YKR077W YOL166W-AQ8TGJ1 51 aa0.76□□□□□ -2.29
MSA2YKR077W YBT1P32386 1661 aa0.75□□□□□ -2.29
MSA2YKR077W PEP1P32319 1579 aa0.75□□□□□ -2.29
MSA2YKR077W IRC20Q06554 1556 aa0.75□□□□□ -2.29
MSA2YKR077W YBR032WP38223 100 aa0.75□□□□□ -2.29
MSA2YKR077W YBL039W-BP0C268 59 aa0.74□□□□□ -2.29
MSA2YKR077W YLR146W-AQ2V2P1 62 aa0.74□□□□□ -2.29
MSA2YKR077W NUP188P52593 1655 aaKnown RBP0.74□□□□□ -2.29
MSA2YKR077W YOR093CQ12275 1648 aa0.74□□□□□ -2.29
MSA2YKR077W HKR1P41809 1802 aa0.73□□□□□ -2.29
MSA2YKR077W SNF2P22082 1703 aa0.73□□□□□ -2.29
MSA2YKR077W YOR192C-CQ3E736 78 aa0.73□□□□□ -2.29
MSA2YKR077W YBR200W-AQ3E755 54 aa0.73□□□□□ -2.29
MSA2YKR077W ULS1Q08562 1619 aa0.73□□□□□ -2.29
MSA2YKR077W PDR15Q04182 1529 aaKnown RBP0.73□□□□□ -2.29
MSA2YKR077W YOR011W-AQ3E807 68 aa0.72□□□□□ -2.29
MSA2YKR077W YOL164W-AQ3E7A5 60 aa0.71□□□□□ -2.3
MSA2YKR077W KOG1P38873 1557 aa0.7□□□□□ -2.3
MSA2YKR077W USO1P25386 1790 aa0.7□□□□□ -2.3
MSA2YKR077W YLR157W-DP0CE99 70 aa0.7□□□□□ -2.3
MSA2YKR077W RPS27AP35997 82 aaKnown RBP0.7□□□□□ -2.3
MSA2YKR077W YOR394C-AQ8TGJ0 55 aa0.7□□□□□ -2.3
MSA2YKR077W YMR001C-AQ8TGS9 76 aa0.7□□□□□ -2.3
MSA2YKR077W THO2P53552 1597 aaKnown RBP0.69□□□□□ -2.3
MSA2YKR077W YBR016WP38216 128 aa0.68□□□□□ -2.3
MSA2YKR077W YFR009W-AP0C5M9 85 aa0.67□□□□□ -2.3
MSA2YKR077W OLI1P61829 76 aa0.67□□□□□ -2.3
MSA2YKR077W STU1P38198 1513 aa0.67□□□□□ -2.3
MSA2YKR077W NUP192P47054 1683 aa0.66□□□□□ -2.3
MSA2YKR077W RKR1Q04781 1562 aa0.66□□□□□ -2.3
MSA2YKR077W SEN1Q00416 2231 aaKnown RBP0.65□□□□□ -2.3
MSA2YKR077W YGR025WP53216 100 aa0.65□□□□□ -2.31
MSA2YKR077W YBL044WP38194 122 aa0.64□□□□□ -2.31
MSA2YKR077W RPS27BP38711 82 aa0.63□□□□□ -2.31
MSA2YKR077W YBR230W-AQ3E762 66 aa0.63□□□□□ -2.31
MSA2YKR077W NUP170P38181 1502 aa0.63□□□□□ -2.31
MSA2YKR077W YPR010C-AA5Z2X5 72 aa0.62□□□□□ -2.31
MSA2YKR077W BUD3P25558 1636 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms