RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W TY1B-PLQ12414 1755 aaKnown RBP0.89□□□□□ -2.27
TRM2YKR056W DOP1Q03921 1698 aa0.88□□□□□ -2.27
TRM2YKR056W YOL097W-AQ3E7Y9 61 aa0.87□□□□□ -2.27
TRM2YKR056W TY2B-LR1P0C2J3 1770 aa0.87□□□□□ -2.27
TRM2YKR056W TY2B-FP0CX63 1770 aa0.87□□□□□ -2.27
TRM2YKR056W TY2B-GR2P0CX64 1770 aa0.87□□□□□ -2.27
TRM2YKR056W TY2B-DR2Q03494 1770 aa0.87□□□□□ -2.27
TRM2YKR056W TY2B-OR1Q12113 1770 aa0.87□□□□□ -2.27
TRM2YKR056W TY2B-BQ12491 1770 aa0.87□□□□□ -2.27
TRM2YKR056W TY2B-OR2Q12501 1770 aa0.87□□□□□ -2.27
TRM2YKR056W TCB3Q03640 1545 aaKnown RBP0.86□□□□□ -2.27
TRM2YKR056W YFR009W-AP0C5M9 85 aa0.85□□□□□ -2.27
TRM2YKR056W PAU7P39545 55 aa0.85□□□□□ -2.27
TRM2YKR056W YBR016WP38216 128 aa0.85□□□□□ -2.27
TRM2YKR056W ATP17Q06405 101 aa0.85□□□□□ -2.27
TRM2YKR056W YOL131WQ08270 108 aa0.85□□□□□ -2.27
TRM2YKR056W TY2B-DR3Q07791 1770 aaKnown RBP0.85□□□□□ -2.27
TRM2YKR056W YFR010W-AP0C5N0 62 aa0.84□□□□□ -2.27
TRM2YKR056W YIL134C-AQ45U18 67 aa0.84□□□□□ -2.27
TRM2YKR056W SEN1Q00416 2231 aaKnown RBP0.84□□□□□ -2.28
TRM2YKR056W PMD1P32634 1753 aa0.84□□□□□ -2.28
TRM2YKR056W YDR246W-AQ3E763 66 aa0.83□□□□□ -2.28
TRM2YKR056W HKR1P41809 1802 aa0.83□□□□□ -2.28
TRM2YKR056W YBR032WP38223 100 aa0.83□□□□□ -2.28
TRM2YKR056W SPI1P40092 148 aa0.83□□□□□ -2.28
TRM2YKR056W SCC2Q04002 1493 aa0.82□□□□□ -2.28
TRM2YKR056W YLR146W-AQ2V2P1 62 aa0.81□□□□□ -2.28
TRM2YKR056W TY1B-JR1P47098 1755 aa0.81□□□□□ -2.28
TRM2YKR056W TY1B-ML2Q03434 1755 aaKnown RBP0.81□□□□□ -2.28
TRM2YKR056W TY1B-ER1Q03612 1755 aa0.81□□□□□ -2.28
TRM2YKR056W TY1B-OLQ12273 1755 aa0.81□□□□□ -2.28
TRM2YKR056W DNF1P32660 1571 aa0.8□□□□□ -2.28
TRM2YKR056W YSY6P38374 65 aa0.79□□□□□ -2.28
TRM2YKR056W YIL102C-AQ2V2P5 75 aa0.77□□□□□ -2.29
TRM2YKR056W DNF2Q12675 1612 aa0.77□□□□□ -2.29
TRM2YKR056W VPS15P22219 1454 aa0.77□□□□□ -2.29
TRM2YKR056W RPS30AP0CX33 63 aaKnown RBP0.77□□□□□ -2.29
TRM2YKR056W RPS30BP0CX34 63 aaKnown RBP0.77□□□□□ -2.29
TRM2YKR056W RPS29BP41058 56 aaKnown RBP0.77□□□□□ -2.29
TRM2YKR056W EDC1P53080 175 aaPredicted RBP0.77□□□□□ -2.29
TRM2YKR056W TAO3P40468 2376 aa0.76□□□□□ -2.29
TRM2YKR056W YBR200W-AQ3E755 54 aa0.76□□□□□ -2.29
TRM2YKR056W YBL039W-BP0C268 59 aa0.76□□□□□ -2.29
TRM2YKR056W RPO31P04051 1460 aa0.75□□□□□ -2.29
TRM2YKR056W MYO4P32492 1471 aa0.74□□□□□ -2.29
TRM2YKR056W RPS27AP35997 82 aaKnown RBP0.74□□□□□ -2.29
TRM2YKR056W VMA9Q3E7B6 73 aa0.74□□□□□ -2.29
TRM2YKR056W RRP5Q05022 1729 aaKnown RBP0.73□□□□□ -2.29
TRM2YKR056W ARO1P08566 1588 aaKnown RBP0.73□□□□□ -2.29
TRM2YKR056W HUB1Q6Q546 73 aa0.73□□□□□ -2.29
TRM2YKR056W IQG1Q12280 1495 aa0.73□□□□□ -2.29
TRM2YKR056W APC1P53886 1748 aa0.72□□□□□ -2.29
TRM2YKR056W SMC4Q12267 1418 aa0.72□□□□□ -2.29
TRM2YKR056W IML1P47170 1584 aa0.72□□□□□ -2.29
TRM2YKR056W FKS3Q04952 1785 aa0.72□□□□□ -2.29
TRM2YKR056W YBL044WP38194 122 aa0.71□□□□□ -2.3
TRM2YKR056W YDR182W-AQ3E796 67 aa0.71□□□□□ -2.3
TRM2YKR056W YOR394C-AQ8TGJ0 55 aa0.71□□□□□ -2.3
TRM2YKR056W YOR011W-AQ3E807 68 aa0.7□□□□□ -2.3
TRM2YKR056W YOL166W-AQ8TGJ1 51 aa0.69□□□□□ -2.3
TRM2YKR056W YOR192C-CQ3E736 78 aa0.68□□□□□ -2.3
TRM2YKR056W TY3B-GQ99315 1547 aa0.67□□□□□ -2.3
TRM2YKR056W YCR108CQ3E819 63 aa0.66□□□□□ -2.3
TRM2YKR056W OLI1P61829 76 aa0.65□□□□□ -2.31
TRM2YKR056W YMR001C-AQ8TGS9 76 aa0.65□□□□□ -2.31
TRM2YKR056W IRC20Q06554 1556 aa0.65□□□□□ -2.31
TRM2YKR056W PDR12Q02785 1511 aa0.64□□□□□ -2.31
TRM2YKR056W YGR025WP53216 100 aa0.64□□□□□ -2.31
TRM2YKR056W RPO21P04050 1733 aaKnown RBP0.63□□□□□ -2.31
TRM2YKR056W YLR157W-DP0CE99 70 aa0.62□□□□□ -2.31
TRM2YKR056W HAP1P0CE41 1502 aa0.62□□□□□ -2.31
TRM2YKR056W MMS1Q06211 1407 aa0.62□□□□□ -2.31
TRM2YKR056W SIP18P50263 79 aa0.62□□□□□ -2.31
TRM2YKR056W KOG1P38873 1557 aa0.6□□□□□ -2.31
TRM2YKR056W PDR15Q04182 1529 aaKnown RBP0.6□□□□□ -2.31
TRM2YKR056W RPS27BP38711 82 aa0.58□□□□□ -2.32
TRM2YKR056W VMR1P38735 1592 aa0.56□□□□□ -2.32
TRM2YKR056W YKL023C-AQ2V2P3 75 aa0.55□□□□□ -2.32
TRM2YKR056W BCK1Q01389 1478 aa0.55□□□□□ -2.32
TRM2YKR056W VTH1P40438 1549 aa0.55□□□□□ -2.32
TRM2YKR056W VTH2P40890 1549 aa0.55□□□□□ -2.32
TRM2YKR056W CDC25P04821 1589 aa0.53□□□□□ -2.32
TRM2YKR056W PDR5P33302 1511 aaKnown RBP0.53□□□□□ -2.33
TRM2YKR056W TY1B-DR4Q07793 1604 aa0.52□□□□□ -2.33
TRM2YKR056W TOS6P48560 102 aa0.52□□□□□ -2.33
TRM2YKR056W UTP20P35194 2493 aaKnown RBP0.52□□□□□ -2.33
TRM2YKR056W YBR230W-AQ3E762 66 aa0.52□□□□□ -2.33
TRM2YKR056W SPT6P23615 1451 aaKnown RBP0.52□□□□□ -2.33
TRM2YKR056W YBT1P32386 1661 aa0.51□□□□□ -2.33
TRM2YKR056W YOR008C-AQ3E7B9 74 aa0.51□□□□□ -2.33
TRM2YKR056W YBR056W-AI2HB52 66 aa0.5□□□□□ -2.33
TRM2YKR056W SPO14P36126 1683 aa0.5□□□□□ -2.33
TRM2YKR056W YCF1P39109 1515 aaKnown RBP0.5□□□□□ -2.33
TRM2YKR056W YGR146C-AQ8TGT9 53 aa0.48□□□□□ -2.33
TRM2YKR056W YOR093CQ12275 1648 aa0.48□□□□□ -2.33
TRM2YKR056W SNQ2P32568 1501 aaKnown RBP0.48□□□□□ -2.33
TRM2YKR056W MON2P48563 1636 aaPredicted RBP0.47□□□□□ -2.33
TRM2YKR056W CUP1-1P0CX80 61 aa0.47□□□□□ -2.33
TRM2YKR056W CUP1-2P0CX81 61 aa0.47□□□□□ -2.33
TRM2YKR056W NUM1Q00402 2748 aa0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms