RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W MPC2P38857 129 aa1.45□□□□□ -2.18
SNU114YKL173W MOT1P32333 1867 aa1.45□□□□□ -2.18
SNU114YKL173W YMR122CQ03879 124 aa1.45□□□□□ -2.18
SNU114YKL173W IRC21Q04772 201 aa1.45□□□□□ -2.18
SNU114YKL173W YDR010CQ12426 110 aa1.45□□□□□ -2.18
SNU114YKL173W COX19Q3E731 98 aa1.45□□□□□ -2.18
SNU114YKL173W YIL163CP40448 117 aa1.44□□□□□ -2.18
SNU114YKL173W YIL156W-BQ2V2P4 73 aa1.44□□□□□ -2.18
SNU114YKL173W TAR1Q8TGM6 124 aa1.44□□□□□ -2.18
SNU114YKL173W YHR173CP38864 112 aa1.44□□□□□ -2.18
SNU114YKL173W YOR314WQ12506 109 aa1.44□□□□□ -2.18
SNU114YKL173W SEC16P48415 2195 aaKnown RBP1.43□□□□□ -2.18
SNU114YKL173W ERI1P62651 68 aaKnown RBP1.43□□□□□ -2.18
SNU114YKL173W YKL018C-AQ3E7A7 99 aa1.43□□□□□ -2.18
SNU114YKL173W DSE2P38844 325 aa1.43□□□□□ -2.18
SNU114YKL173W COX12Q01519 83 aa1.43□□□□□ -2.18
SNU114YKL173W FLO9P39712 1322 aa1.43□□□□□ -2.18
SNU114YKL173W YAL065CO13511 128 aa1.42□□□□□ -2.18
SNU114YKL173W QCR9P22289 66 aa1.42□□□□□ -2.18
SNU114YKL173W YSY6P38374 65 aa1.42□□□□□ -2.18
SNU114YKL173W SMX2P40204 77 aaKnown RBP1.42□□□□□ -2.18
SNU114YKL173W YPR096CO13587 100 aa1.42□□□□□ -2.18
SNU114YKL173W YSF3P0C074 85 aaPredicted RBP1.42□□□□□ -2.18
SNU114YKL173W MRX7P53869 86 aa1.42□□□□□ -2.18
SNU114YKL173W YHR086W-AQ3E746 53 aa1.42□□□□□ -2.18
SNU114YKL173W NOP10Q6Q547 58 aaPredicted RBP1.42□□□□□ -2.18
SNU114YKL173W YEL008WP40001 126 aa1.42□□□□□ -2.18
SNU114YKL173W YGR121W-AQ3E816 71 aa1.42□□□□□ -2.18
SNU114YKL173W STT4P37297 1900 aa1.41□□□□□ -2.18
SNU114YKL173W RPL33AP05744 107 aaKnown RBP1.41□□□□□ -2.18
SNU114YKL173W YOR032W-AQ8TGS1 66 aa1.41□□□□□ -2.18
SNU114YKL173W VAM10Q08474 114 aa1.41□□□□□ -2.18
SNU114YKL173W MRPS12P53732 153 aa1.4□□□□□ -2.18
SNU114YKL173W BSC4P53841 131 aa1.4□□□□□ -2.18
SNU114YKL173W YLR162WQ06235 118 aa1.4□□□□□ -2.18
SNU114YKL173W LCL2Q08045 131 aa1.4□□□□□ -2.18
SNU114YKL173W CCW12Q12127 133 aa1.4□□□□□ -2.18
SNU114YKL173W YKL065W-AQ2V2P2 73 aa1.4□□□□□ -2.18
SNU114YKL173W YBR219CP38317 127 aa1.4□□□□□ -2.19
SNU114YKL173W YNL190WP53872 204 aa1.4□□□□□ -2.19
SNU114YKL173W YHR007C-AQ07074 71 aa1.4□□□□□ -2.19
SNU114YKL173W YOR034C-AQ3E735 80 aa1.4□□□□□ -2.19
SNU114YKL173W YOR192C-CQ3E736 78 aa1.4□□□□□ -2.19
SNU114YKL173W YGR035W-AQ45U48 73 aa1.4□□□□□ -2.19
SNU114YKL173W YCL048W-AQ2V2Q2 79 aa1.39□□□□□ -2.19
SNU114YKL173W YDL022C-AP0C5L6 82 aa1.39□□□□□ -2.19
SNU114YKL173W YHL037CP38733 133 aa1.39□□□□□ -2.19
SNU114YKL173W PAU7P39545 55 aa1.39□□□□□ -2.19
SNU114YKL173W YBR056W-AI2HB52 66 aa1.38□□□□□ -2.19
SNU114YKL173W EDC1P53080 175 aaPredicted RBP1.38□□□□□ -2.19
SNU114YKL173W YDR246W-AQ3E763 66 aa1.38□□□□□ -2.19
SNU114YKL173W YGL041C-BQ3E750 60 aa1.37□□□□□ -2.19
SNU114YKL173W COA3Q3E7B2 85 aa1.37□□□□□ -2.19
SNU114YKL173W CCW14O13547 238 aa1.37□□□□□ -2.19
SNU114YKL173W YLR255CO13574 117 aa1.37□□□□□ -2.19
SNU114YKL173W YIL046W-AQ3E7Z4 54 aa1.37□□□□□ -2.19
SNU114YKL173W SPI1P40092 148 aa1.37□□□□□ -2.19
SNU114YKL173W YDR210WQ03482 75 aa1.37□□□□□ -2.19
SNU114YKL173W RPS11AP0CX47 156 aaKnown RBP1.36□□□□□ -2.19
SNU114YKL173W RPS11BP0CX48 156 aaKnown RBP1.36□□□□□ -2.19
SNU114YKL173W YCL042WP25572 119 aa1.36□□□□□ -2.19
SNU114YKL173W AIM19P40502 157 aa1.36□□□□□ -2.19
SNU114YKL173W YNL042W-BQ3E7Z2 85 aa1.36□□□□□ -2.19
SNU114YKL173W RPS30AP0CX33 63 aaKnown RBP1.36□□□□□ -2.19
SNU114YKL173W RPS30BP0CX34 63 aaKnown RBP1.36□□□□□ -2.19
SNU114YKL173W AQY2P0CD90 149 aa1.35□□□□□ -2.19
SNU114YKL173W SGF11Q03067 99 aa1.35□□□□□ -2.19
SNU114YKL173W YKL023C-AQ2V2P3 75 aa1.35□□□□□ -2.19
SNU114YKL173W YBR201C-AQ2V2Q3 67 aa1.35□□□□□ -2.19
SNU114YKL173W RPL43AP0CX25 92 aaKnown RBP1.34□□□□□ -2.19
SNU114YKL173W RPL43BP0CX26 92 aa1.34□□□□□ -2.19
SNU114YKL173W MGR2Q02889 113 aa1.34□□□□□ -2.19
SNU114YKL173W YGR240C-AQ3E786 66 aa1.34□□□□□ -2.19
SNU114YKL173W MVB12P42939 101 aa1.34□□□□□ -2.2
SNU114YKL173W YMR122W-AQ3E842 84 aa1.34□□□□□ -2.2
SNU114YKL173W LCL1Q02786 101 aa1.33□□□□□ -2.2
SNU114YKL173W MDN1Q12019 4910 aaKnown RBP1.32□□□□□ -2.2
SNU114YKL173W Q0032Q9ZZX7 96 aa1.32□□□□□ -2.2
SNU114YKL173W YNL122CP53921 115 aaPredicted RBP1.31□□□□□ -2.2
SNU114YKL173W YNL146C-AQ3E7Z1 64 aa1.31□□□□□ -2.2
SNU114YKL173W YBR032WP38223 100 aa1.3□□□□□ -2.2
SNU114YKL173W SHU1P38751 150 aa1.3□□□□□ -2.2
SNU114YKL173W YMR007WQ03675 126 aa1.3□□□□□ -2.2
SNU114YKL173W ATP17Q06405 101 aa1.3□□□□□ -2.2
SNU114YKL173W YLR146W-AQ2V2P1 62 aa1.3□□□□□ -2.2
SNU114YKL173W YDR182W-AQ3E796 67 aa1.3□□□□□ -2.2
SNU114YKL173W ATP18P81450 59 aa1.29□□□□□ -2.2
SNU114YKL173W SDH6Q3E785 79 aa1.29□□□□□ -2.2
SNU114YKL173W YOL166W-AQ8TGJ1 51 aa1.29□□□□□ -2.2
SNU114YKL173W YCR001WP25347 104 aa1.29□□□□□ -2.2
SNU114YKL173W HUB1Q6Q546 73 aa1.29□□□□□ -2.2
SNU114YKL173W YIL086CP40503 102 aa1.28□□□□□ -2.2
SNU114YKL173W RPS27AP35997 82 aaKnown RBP1.27□□□□□ -2.21
SNU114YKL173W RPS27BP38711 82 aa1.27□□□□□ -2.21
SNU114YKL173W YIL102CP40488 101 aa1.27□□□□□ -2.21
SNU114YKL173W YOR072WQ08486 104 aa1.27□□□□□ -2.21
SNU114YKL173W RPL38P49167 78 aaKnown RBP1.26□□□□□ -2.21
SNU114YKL173W YLR157W-DP0CE99 70 aa1.26□□□□□ -2.21
SNU114YKL173W HUG1Q6Q5K6 68 aa1.26□□□□□ -2.21
SNU114YKL173W YOL013W-AP0C272 63 aaPredicted RBP1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms