RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W VPS55P47111 140 aa2.47□□□□□ -2.01
NUP85YJR042W HPA2Q06592 156 aa2.47□□□□□ -2.01
NUP85YJR042W OST5Q92316 86 aa2.47□□□□□ -2.01
NUP85YJR042W YEL014CP39999 101 aa2.46□□□□□ -2.01
NUP85YJR042W PRM7Q12459 698 aa2.46□□□□□ -2.01
NUP85YJR042W MRPS12P53732 153 aa2.46□□□□□ -2.02
NUP85YJR042W HOR7Q05827 59 aa2.46□□□□□ -2.02
NUP85YJR042W YOR011W-AQ3E807 68 aa2.46□□□□□ -2.02
NUP85YJR042W YJL144WP47009 104 aa2.45□□□□□ -2.02
NUP85YJR042W QCR8P08525 94 aa2.44□□□□□ -2.02
NUP85YJR042W SHU1P38751 150 aa2.44□□□□□ -2.02
NUP85YJR042W YFL065CP43539 102 aa2.44□□□□□ -2.02
NUP85YJR042W YPR203WQ08994 102 aa2.44□□□□□ -2.02
NUP85YJR042W URA2P07259 2214 aaKnown RBP2.44□□□□□ -2.02
NUP85YJR042W AIM4P38305 123 aaPredicted RBP2.44□□□□□ -2.02
NUP85YJR042W YCR085WP25650 117 aa2.43□□□□□ -2.02
NUP85YJR042W RPA12P32529 125 aaKnown RBP2.43□□□□□ -2.02
NUP85YJR042W Q0297Q9ZZV8 51 aa2.43□□□□□ -2.02
NUP85YJR042W YBR056W-AI2HB52 66 aa2.42□□□□□ -2.02
NUP85YJR042W NRG2P38082 220 aa2.42□□□□□ -2.02
NUP85YJR042W YEL008WP40001 126 aa2.42□□□□□ -2.02
NUP85YJR042W RGM1Q00453 211 aa2.42□□□□□ -2.02
NUP85YJR042W TRA1P38811 3744 aa2.42□□□□□ -2.02
NUP85YJR042W RPS11AP0CX47 156 aaKnown RBP2.42□□□□□ -2.02
NUP85YJR042W RPS11BP0CX48 156 aaKnown RBP2.42□□□□□ -2.02
NUP85YJR042W PMP3P87284 55 aa2.42□□□□□ -2.02
NUP85YJR042W YNL190WP53872 204 aa2.41□□□□□ -2.02
NUP85YJR042W EMC6Q12431 108 aa2.41□□□□□ -2.02
NUP85YJR042W YLR285C-AQ3E771 56 aa2.41□□□□□ -2.02
NUP85YJR042W TAR1Q8TGM6 124 aa2.41□□□□□ -2.02
NUP85YJR042W ICY1Q04329 127 aa2.41□□□□□ -2.02
NUP85YJR042W COX12Q01519 83 aa2.4□□□□□ -2.03
NUP85YJR042W YFL041W-AQ3E817 63 aa2.4□□□□□ -2.03
NUP85YJR042W YJL197C-AP0C5P0 93 aa2.4□□□□□ -2.03
NUP85YJR042W DSE2P38844 325 aa2.4□□□□□ -2.03
NUP85YJR042W MPC2P38857 129 aa2.4□□□□□ -2.03
NUP85YJR042W YMR175W-AQ3E766 64 aa2.4□□□□□ -2.03
NUP85YJR042W YGL014C-AP0C5N1 53 aa2.39□□□□□ -2.03
NUP85YJR042W RPL36BO14455 100 aaKnown RBP2.38□□□□□ -2.03
NUP85YJR042W RPL36AP05745 100 aaPredicted RBP2.38□□□□□ -2.03
NUP85YJR042W AIM19P40502 157 aa2.38□□□□□ -2.03
NUP85YJR042W YDR381C-AQ3E6R5 114 aa2.38□□□□□ -2.03
NUP85YJR042W ENV10Q99382 181 aa2.38□□□□□ -2.03
NUP85YJR042W YGR240C-AQ3E786 66 aa2.38□□□□□ -2.03
NUP85YJR042W ERI1P62651 68 aaKnown RBP2.37□□□□□ -2.03
NUP85YJR042W VAM10Q08474 114 aa2.37□□□□□ -2.03
NUP85YJR042W YMR122W-AQ3E842 84 aa2.37□□□□□ -2.03
NUP85YJR042W YHR212W-AP0CX91 67 aa2.37□□□□□ -2.03
NUP85YJR042W YBR219CP38317 127 aa2.37□□□□□ -2.03
NUP85YJR042W ICS3P47034 131 aa2.37□□□□□ -2.03
NUP85YJR042W YBR027CP38220 110 aa2.36□□□□□ -2.03
NUP85YJR042W RSM18P40033 138 aa2.36□□□□□ -2.03
NUP85YJR042W YLL006W-AQ3E814 58 aa2.36□□□□□ -2.03
NUP85YJR042W PRP8P33334 2413 aaKnown RBP2.36□□□□□ -2.03
NUP85YJR042W SPC1P46965 94 aa2.36□□□□□ -2.03
NUP85YJR042W TEL1P38110 2787 aa2.35□□□□□ -2.03
NUP85YJR042W YDR119W-AQ2V2P9 66 aa2.35□□□□□ -2.03
NUP85YJR042W YAL065CO13511 128 aa2.34□□□□□ -2.03
NUP85YJR042W RPL29P05747 59 aaPredicted RBP2.34□□□□□ -2.03
NUP85YJR042W RPL43AP0CX25 92 aaKnown RBP2.34□□□□□ -2.03
NUP85YJR042W RPL43BP0CX26 92 aa2.34□□□□□ -2.03
NUP85YJR042W YJR107C-AP0CT86 78 aa2.33□□□□□ -2.04
NUP85YJR042W IRC21Q04772 201 aa2.33□□□□□ -2.04
NUP85YJR042W MEC1P38111 2368 aa2.33□□□□□ -2.04
NUP85YJR042W YPR010C-AA5Z2X5 72 aa2.33□□□□□ -2.04
NUP85YJR042W RPC10P40422 70 aa2.32□□□□□ -2.04
NUP85YJR042W YHR007C-AQ07074 71 aa2.32□□□□□ -2.04
NUP85YJR042W YOR034C-AQ3E735 80 aa2.32□□□□□ -2.04
NUP85YJR042W YCR001WP25347 104 aa2.32□□□□□ -2.04
NUP85YJR042W YPL038W-AQ3E7B4 63 aa2.32□□□□□ -2.04
NUP85YJR042W RPL33AP05744 107 aaKnown RBP2.31□□□□□ -2.04
NUP85YJR042W YSY6P38374 65 aa2.31□□□□□ -2.04
NUP85YJR042W MVB12P42939 101 aa2.31□□□□□ -2.04
NUP85YJR042W ATP18P81450 59 aa2.31□□□□□ -2.04
NUP85YJR042W YDL012CQ12489 107 aa2.31□□□□□ -2.04
NUP85YJR042W YCR095W-AQ3E787 52 aa2.31□□□□□ -2.04
NUP85YJR042W YGR035W-AQ45U48 73 aa2.31□□□□□ -2.04
NUP85YJR042W SGF11Q03067 99 aa2.3□□□□□ -2.04
NUP85YJR042W YMR122CQ03879 124 aa2.3□□□□□ -2.04
NUP85YJR042W YLR162WQ06235 118 aa2.3□□□□□ -2.04
NUP85YJR042W TOM6P33448 61 aa2.3□□□□□ -2.04
NUP85YJR042W YHL005CP38752 130 aa2.3□□□□□ -2.04
NUP85YJR042W YBL039W-BP0C268 59 aa2.29□□□□□ -2.04
NUP85YJR042W AQY2P0CD90 149 aa2.29□□□□□ -2.04
NUP85YJR042W YCL042WP25572 119 aa2.27□□□□□ -2.05
NUP85YJR042W YFR009W-AP0C5M9 85 aa2.27□□□□□ -2.05
NUP85YJR042W EDC1P53080 175 aaPredicted RBP2.26□□□□□ -2.05
NUP85YJR042W YBR230W-AQ3E762 66 aa2.26□□□□□ -2.05
NUP85YJR042W YLR307C-AQ3E825 87 aa2.26□□□□□ -2.05
NUP85YJR042W YLL066W-BQ8TGJ7 56 aa2.25□□□□□ -2.05
NUP85YJR042W YJL127C-BQ3E828 52 aa2.25□□□□□ -2.05
NUP85YJR042W RPL38P49167 78 aaKnown RBP2.24□□□□□ -2.05
NUP85YJR042W LCL2Q08045 131 aa2.24□□□□□ -2.05
NUP85YJR042W YHR086W-AQ3E746 53 aa2.24□□□□□ -2.05
NUP85YJR042W YDR246W-AQ3E763 66 aa2.24□□□□□ -2.05
NUP85YJR042W YNL042W-BQ3E7Z2 85 aa2.24□□□□□ -2.05
NUP85YJR042W TOR1P35169 2470 aa2.24□□□□□ -2.05
NUP85YJR042W SNA2P56508 79 aa2.23□□□□□ -2.05
NUP85YJR042W YLR255CO13574 117 aa2.22□□□□□ -2.05
NUP85YJR042W YOR314WQ12506 109 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 146.7 ms