RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C PDR12Q02785 1511 aa1.5□□□□□ -2.17
YIR043CYIR043C SPI1P40092 148 aa1.5□□□□□ -2.17
YIR043CYIR043C YBR201C-AQ2V2Q3 67 aa1.5□□□□□ -2.17
YIR043CYIR043C YNL042W-BQ3E7Z2 85 aa1.5□□□□□ -2.17
YIR043CYIR043C TY2B-CP25384 1770 aa1.49□□□□□ -2.17
YIR043CYIR043C TY2B-DR1Q12472 1770 aa1.49□□□□□ -2.17
YIR043CYIR043C YDR246W-AQ3E763 66 aa1.49□□□□□ -2.17
YIR043CYIR043C YKL018C-AQ3E7A7 99 aa1.49□□□□□ -2.17
YIR043CYIR043C FKS3Q04952 1785 aa1.49□□□□□ -2.17
YIR043CYIR043C YSY6P38374 65 aa1.48□□□□□ -2.17
YIR043CYIR043C YOR032W-AQ8TGS1 66 aa1.48□□□□□ -2.17
YIR043CYIR043C Q0032Q9ZZX7 96 aa1.48□□□□□ -2.17
YIR043CYIR043C HAP1P0CE41 1502 aa1.48□□□□□ -2.17
YIR043CYIR043C TY2B-LR1P0C2J3 1770 aa1.48□□□□□ -2.17
YIR043CYIR043C TY2B-FP0CX63 1770 aa1.48□□□□□ -2.17
YIR043CYIR043C TY2B-GR2P0CX64 1770 aa1.48□□□□□ -2.17
YIR043CYIR043C TY2B-DR2Q03494 1770 aa1.48□□□□□ -2.17
YIR043CYIR043C TY2B-DR3Q07791 1770 aaKnown RBP1.48□□□□□ -2.17
YIR043CYIR043C TY2B-OR1Q12113 1770 aa1.48□□□□□ -2.17
YIR043CYIR043C TY2B-BQ12491 1770 aa1.48□□□□□ -2.17
YIR043CYIR043C TY2B-OR2Q12501 1770 aa1.48□□□□□ -2.17
YIR043CYIR043C MON2P48563 1636 aaPredicted RBP1.48□□□□□ -2.17
YIR043CYIR043C PAU7P39545 55 aa1.47□□□□□ -2.17
YIR043CYIR043C YBR072C-AQ3E794 53 aa1.47□□□□□ -2.17
YIR043CYIR043C YNL190WP53872 204 aa1.45□□□□□ -2.18
YIR043CYIR043C SGF11Q03067 99 aa1.45□□□□□ -2.18
YIR043CYIR043C ATP18P81450 59 aa1.44□□□□□ -2.18
YIR043CYIR043C PRP8P33334 2413 aaKnown RBP1.44□□□□□ -2.18
YIR043CYIR043C RPO21P04050 1733 aaKnown RBP1.43□□□□□ -2.18
YIR043CYIR043C ATP17Q06405 101 aa1.43□□□□□ -2.18
YIR043CYIR043C SNQ2P32568 1501 aaKnown RBP1.43□□□□□ -2.18
YIR043CYIR043C APC1P53886 1748 aa1.43□□□□□ -2.18
YIR043CYIR043C DNF3Q12674 1656 aa1.42□□□□□ -2.18
YIR043CYIR043C YCF1P39109 1515 aaKnown RBP1.42□□□□□ -2.18
YIR043CYIR043C SPT6P23615 1451 aaKnown RBP1.42□□□□□ -2.18
YIR043CYIR043C IML1P47170 1584 aa1.42□□□□□ -2.18
YIR043CYIR043C PDR5P33302 1511 aaKnown RBP1.41□□□□□ -2.18
YIR043CYIR043C VTH1P40438 1549 aa1.41□□□□□ -2.18
YIR043CYIR043C VTH2P40890 1549 aa1.41□□□□□ -2.18
YIR043CYIR043C SNF2P22082 1703 aa1.41□□□□□ -2.18
YIR043CYIR043C MMS1Q06211 1407 aa1.4□□□□□ -2.18
YIR043CYIR043C DNF2Q12675 1612 aa1.4□□□□□ -2.18
YIR043CYIR043C RPS30AP0CX33 63 aaKnown RBP1.4□□□□□ -2.19
YIR043CYIR043C RPS30BP0CX34 63 aaKnown RBP1.4□□□□□ -2.19
YIR043CYIR043C RPC10P40422 70 aa1.4□□□□□ -2.19
YIR043CYIR043C SDH6Q3E785 79 aa1.4□□□□□ -2.19
YIR043CYIR043C COX7P10174 60 aa1.39□□□□□ -2.19
YIR043CYIR043C EDC1P53080 175 aaPredicted RBP1.39□□□□□ -2.19
YIR043CYIR043C YDR182W-AQ3E796 67 aa1.39□□□□□ -2.19
YIR043CYIR043C YOL097W-AQ3E7Y9 61 aa1.39□□□□□ -2.19
YIR043CYIR043C TY3B-GQ99315 1547 aa1.39□□□□□ -2.19
YIR043CYIR043C RIM15P43565 1770 aa1.38□□□□□ -2.19
YIR043CYIR043C CDC25P04821 1589 aa1.38□□□□□ -2.19
YIR043CYIR043C ARO1P08566 1588 aaKnown RBP1.38□□□□□ -2.19
YIR043CYIR043C SSK2P53599 1579 aa1.37□□□□□ -2.19
YIR043CYIR043C RPL38P49167 78 aaKnown RBP1.36□□□□□ -2.19
YIR043CYIR043C YKL023C-AQ2V2P3 75 aa1.36□□□□□ -2.19
YIR043CYIR043C YPR108W-AQ3E7B3 70 aa1.36□□□□□ -2.19
YIR043CYIR043C HUB1Q6Q546 73 aa1.36□□□□□ -2.19
YIR043CYIR043C BCK1Q01389 1478 aa1.36□□□□□ -2.19
YIR043CYIR043C YOL166W-AQ8TGJ1 51 aa1.35□□□□□ -2.19
YIR043CYIR043C SPO14P36126 1683 aa1.35□□□□□ -2.19
YIR043CYIR043C YOR192C-CQ3E736 78 aa1.34□□□□□ -2.19
YIR043CYIR043C YJR107C-AP0CT86 78 aa1.33□□□□□ -2.2
YIR043CYIR043C YLR146W-AQ2V2P1 62 aa1.33□□□□□ -2.2
YIR043CYIR043C YOL164W-AQ3E7A5 60 aa1.33□□□□□ -2.2
YIR043CYIR043C YBR032WP38223 100 aa1.32□□□□□ -2.2
YIR043CYIR043C YBL039W-BP0C268 59 aa1.31□□□□□ -2.2
YIR043CYIR043C YBR200W-AQ3E755 54 aa1.31□□□□□ -2.2
YIR043CYIR043C YBT1P32386 1661 aa1.31□□□□□ -2.2
YIR043CYIR043C PEP1P32319 1579 aa1.3□□□□□ -2.2
YIR043CYIR043C RPS29BP41058 56 aaKnown RBP1.3□□□□□ -2.2
YIR043CYIR043C YOR093CQ12275 1648 aa1.29□□□□□ -2.2
YIR043CYIR043C IRC20Q06554 1556 aa1.28□□□□□ -2.2
YIR043CYIR043C YOR011W-AQ3E807 68 aa1.27□□□□□ -2.21
YIR043CYIR043C YMR001C-AQ8TGS9 76 aa1.27□□□□□ -2.21
YIR043CYIR043C USO1P25386 1790 aa1.26□□□□□ -2.21
YIR043CYIR043C ULS1Q08562 1619 aa1.26□□□□□ -2.21
YIR043CYIR043C YLR157W-DP0CE99 70 aa1.25□□□□□ -2.21
YIR043CYIR043C VMR1P38735 1592 aa1.25□□□□□ -2.21
YIR043CYIR043C PDR15Q04182 1529 aaKnown RBP1.25□□□□□ -2.21
YIR043CYIR043C HKR1P41809 1802 aa1.24□□□□□ -2.21
YIR043CYIR043C NUP188P52593 1655 aaKnown RBP1.24□□□□□ -2.21
YIR043CYIR043C YOR394C-AQ8TGJ0 55 aa1.24□□□□□ -2.21
YIR043CYIR043C RPS27AP35997 82 aaKnown RBP1.23□□□□□ -2.21
YIR043CYIR043C STU1P38198 1513 aa1.19□□□□□ -2.22
YIR043CYIR043C YBR016WP38216 128 aa1.18□□□□□ -2.22
YIR043CYIR043C OLI1P61829 76 aa1.18□□□□□ -2.22
YIR043CYIR043C KOG1P38873 1557 aa1.17□□□□□ -2.22
YIR043CYIR043C SEN1Q00416 2231 aaKnown RBP1.16□□□□□ -2.22
YIR043CYIR043C YFR009W-AP0C5M9 85 aa1.16□□□□□ -2.22
YIR043CYIR043C YGR025WP53216 100 aa1.16□□□□□ -2.22
YIR043CYIR043C THO2P53552 1597 aaKnown RBP1.16□□□□□ -2.22
YIR043CYIR043C NUP192P47054 1683 aa1.14□□□□□ -2.23
YIR043CYIR043C SMX2P40204 77 aaKnown RBP1.14□□□□□ -2.23
YIR043CYIR043C RKR1Q04781 1562 aa1.13□□□□□ -2.23
YIR043CYIR043C NUP170P38181 1502 aa1.13□□□□□ -2.23
YIR043CYIR043C YBL044WP38194 122 aa1.12□□□□□ -2.23
YIR043CYIR043C YBR230W-AQ3E762 66 aa1.12□□□□□ -2.23
YIR043CYIR043C YPR010C-AA5Z2X5 72 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms