RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C OST2P46964 130 aa2.02□□□□□ -2.09
SGN1YIR001C YDL157CQ12082 118 aa2.02□□□□□ -2.09
SGN1YIR001C YOR034C-AQ3E735 80 aa2.02□□□□□ -2.09
SGN1YIR001C YAR1P46683 200 aa2.01□□□□□ -2.09
SGN1YIR001C FYV12Q08559 129 aa2□□□□□ -2.09
SGN1YIR001C SEC11P15367 167 aa1.99□□□□□ -2.09
SGN1YIR001C RSM18P40033 138 aa1.99□□□□□ -2.09
SGN1YIR001C MSL1P40567 111 aaPredicted RBP1.99□□□□□ -2.09
SGN1YIR001C CWC27Q02770 301 aa1.99□□□□□ -2.09
SGN1YIR001C YOL097W-AQ3E7Y9 61 aa1.99□□□□□ -2.09
SGN1YIR001C MPC3P53311 146 aa1.98□□□□□ -2.09
SGN1YIR001C CUE4Q04201 117 aaPredicted RBP1.98□□□□□ -2.09
SGN1YIR001C YDL012CQ12489 107 aa1.98□□□□□ -2.09
SGN1YIR001C COA6Q3E846 104 aa1.98□□□□□ -2.09
SGN1YIR001C Q0017Q9ZZX8 53 aa1.98□□□□□ -2.09
SGN1YIR001C FUN14P18411 198 aa1.97□□□□□ -2.09
SGN1YIR001C SSS1P35179 80 aa1.97□□□□□ -2.09
SGN1YIR001C YGL230CP53074 147 aa1.97□□□□□ -2.09
SGN1YIR001C YIL134C-AQ45U18 67 aa1.97□□□□□ -2.09
SGN1YIR001C TSC3Q3E790 80 aa1.96□□□□□ -2.1
SGN1YIR001C TDA8Q6B2U8 126 aa1.96□□□□□ -2.1
SGN1YIR001C NHP2P32495 156 aaPredicted RBP1.95□□□□□ -2.1
SGN1YIR001C HUR1P45820 110 aa1.95□□□□□ -2.1
SGN1YIR001C ELC1Q03071 99 aa1.95□□□□□ -2.1
SGN1YIR001C DSE2P38844 325 aa1.94□□□□□ -2.1
SGN1YIR001C COF1Q03048 143 aaKnown RBP1.94□□□□□ -2.1
SGN1YIR001C SEN15Q04675 128 aa1.94□□□□□ -2.1
SGN1YIR001C RSM19P53733 91 aaPredicted RBP1.93□□□□□ -2.1
SGN1YIR001C CGR1P53188 120 aa1.92□□□□□ -2.1
SGN1YIR001C YER181CP40097 107 aa1.91□□□□□ -2.1
SGN1YIR001C YLR162WQ06235 118 aa1.91□□□□□ -2.1
SGN1YIR001C YHR213W-BQ8TGK1 99 aa1.91□□□□□ -2.1
SGN1YIR001C MIC10Q96VH5 97 aa1.91□□□□□ -2.1
SGN1YIR001C YJR107C-AP0CT86 78 aa1.9□□□□□ -2.11
SGN1YIR001C YER187WP40102 141 aa1.9□□□□□ -2.11
SGN1YIR001C YDR210WQ03482 75 aa1.9□□□□□ -2.11
SGN1YIR001C NAT5Q08689 176 aa1.9□□□□□ -2.11
SGN1YIR001C YJL133C-AQ3E7A3 74 aa1.9□□□□□ -2.11
SGN1YIR001C YJR128WP47162 119 aa1.89□□□□□ -2.11
SGN1YIR001C SHH4Q06236 168 aa1.89□□□□□ -2.11
SGN1YIR001C PAI3P01094 68 aa1.88□□□□□ -2.11
SGN1YIR001C POP7P38291 140 aa1.88□□□□□ -2.11
SGN1YIR001C YJL009WP47078 108 aa1.88□□□□□ -2.11
SGN1YIR001C ECM19Q06011 112 aa1.88□□□□□ -2.11
SGN1YIR001C LSM6Q06406 86 aaKnown RBP1.88□□□□□ -2.11
SGN1YIR001C YLR361C-AQ3E795 98 aa1.88□□□□□ -2.11
SGN1YIR001C ICS3P47034 131 aa1.87□□□□□ -2.11
SGN1YIR001C YGL034CP53186 121 aa1.87□□□□□ -2.11
SGN1YIR001C YFR009W-AP0C5M9 85 aa1.86□□□□□ -2.11
SGN1YIR001C RPS29AP41057 56 aaKnown RBP1.86□□□□□ -2.11
SGN1YIR001C ATP18P81450 59 aa1.86□□□□□ -2.11
SGN1YIR001C YLR363W-AQ3E747 85 aa1.86□□□□□ -2.11
SGN1YIR001C YHR073W-AP0C5N7 58 aa1.85□□□□□ -2.11
SGN1YIR001C YML108WQ03759 105 aa1.85□□□□□ -2.11
SGN1YIR001C YLR296WQ05898 108 aa1.85□□□□□ -2.11
SGN1YIR001C YOR304C-AO14468 76 aa1.84□□□□□ -2.11
SGN1YIR001C RPS29BP41058 56 aaKnown RBP1.84□□□□□ -2.11
SGN1YIR001C ISD11Q6Q560 94 aa1.84□□□□□ -2.11
SGN1YIR001C EDC1P53080 175 aaPredicted RBP1.83□□□□□ -2.12
SGN1YIR001C COX23P38824 151 aa1.82□□□□□ -2.12
SGN1YIR001C YGR164WP53291 111 aa1.82□□□□□ -2.12
SGN1YIR001C YPR153WQ06537 140 aa1.82□□□□□ -2.12
SGN1YIR001C RPL36AP05745 100 aaPredicted RBP1.81□□□□□ -2.12
SGN1YIR001C TIM11P81449 96 aaPredicted RBP1.81□□□□□ -2.12
SGN1YIR001C YHL042WP38729 150 aa1.8□□□□□ -2.12
SGN1YIR001C TDA2P40045 126 aa1.8□□□□□ -2.12
SGN1YIR001C YJL144WP47009 104 aa1.8□□□□□ -2.12
SGN1YIR001C RPL38P49167 78 aaKnown RBP1.8□□□□□ -2.12
SGN1YIR001C SAE3P89114 91 aa1.8□□□□□ -2.12
SGN1YIR001C YOR316C-AQ3E806 69 aa1.8□□□□□ -2.12
SGN1YIR001C YOL014WQ08110 124 aa1.79□□□□□ -2.12
SGN1YIR001C YDR381C-AQ3E6R5 114 aa1.79□□□□□ -2.12
SGN1YIR001C YAR064WP39563 99 aa1.78□□□□□ -2.12
SGN1YIR001C GLC8P41818 229 aa1.78□□□□□ -2.12
SGN1YIR001C YDL085C-AQ3E7B7 68 aaKnown RBP1.78□□□□□ -2.12
SGN1YIR001C SKI6P46948 246 aaPredicted RBP1.77□□□□□ -2.13
SGN1YIR001C YCR050CP25630 102 aa1.76□□□□□ -2.13
SGN1YIR001C YBR016WP38216 128 aa1.75□□□□□ -2.13
SGN1YIR001C ATP20Q12233 115 aa1.74□□□□□ -2.13
SGN1YIR001C YIL102C-AQ2V2P5 75 aa1.74□□□□□ -2.13
SGN1YIR001C YML054C-AQ3E809 52 aa1.74□□□□□ -2.13
SGN1YIR001C PBI2P0CT04 75 aaKnown RBP1.73□□□□□ -2.13
SGN1YIR001C YLR255CO13574 117 aa1.71□□□□□ -2.14
SGN1YIR001C RAD6P06104 172 aa1.71□□□□□ -2.14
SGN1YIR001C LSM8P47093 109 aaKnown RBP1.71□□□□□ -2.14
SGN1YIR001C LIP1Q03579 150 aa1.7□□□□□ -2.14
SGN1YIR001C YNL198CP40166 100 aa1.69□□□□□ -2.14
SGN1YIR001C YPL080CQ02826 108 aa1.69□□□□□ -2.14
SGN1YIR001C YBL008W-AQ3E821 79 aa1.69□□□□□ -2.14
SGN1YIR001C RPA12P32529 125 aaKnown RBP1.68□□□□□ -2.14
SGN1YIR001C YGR039WP53225 103 aa1.68□□□□□ -2.14
SGN1YIR001C COX8P04039 78 aa1.66□□□□□ -2.14
SGN1YIR001C RPS30AP0CX33 63 aaKnown RBP1.66□□□□□ -2.14
SGN1YIR001C RPS30BP0CX34 63 aaKnown RBP1.66□□□□□ -2.14
SGN1YIR001C YBL044WP38194 122 aa1.66□□□□□ -2.14
SGN1YIR001C YIL156W-BQ2V2P4 73 aa1.66□□□□□ -2.14
SGN1YIR001C YAL067W-AQ8TGK6 75 aa1.66□□□□□ -2.14
SGN1YIR001C YGR146C-AQ8TGT9 53 aa1.65□□□□□ -2.15
SGN1YIR001C YPR170W-BP0C5R9 85 aa1.64□□□□□ -2.15
SGN1YIR001C YCR085WP25650 117 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms