RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C IMP2P46972 177 aa2.15□□□□□ -2.07
XRN1YGL173C YHR213W-AQ8TGT4 77 aa2.15□□□□□ -2.07
XRN1YGL173C RTC6O14464 93 aa2.15□□□□□ -2.07
XRN1YGL173C YOR343CQ12484 108 aa2.15□□□□□ -2.07
XRN1YGL173C RPL39P04650 51 aa2.14□□□□□ -2.07
XRN1YGL173C YBR013CP38215 129 aa2.14□□□□□ -2.07
XRN1YGL173C YBL071CP38185 102 aa2.14□□□□□ -2.07
XRN1YGL173C RRT15Q3E811 62 aa2.14□□□□□ -2.07
XRN1YGL173C ICY1Q04329 127 aa2.13□□□□□ -2.07
XRN1YGL173C PAU23Q07987 124 aa2.13□□□□□ -2.07
XRN1YGL173C YOL131WQ08270 108 aa2.13□□□□□ -2.07
XRN1YGL173C PAU17Q12370 124 aa2.13□□□□□ -2.07
XRN1YGL173C YJL197C-AP0C5P0 93 aa2.12□□□□□ -2.07
XRN1YGL173C YDR042CQ03205 200 aa2.12□□□□□ -2.07
XRN1YGL173C YCR085WP25650 117 aa2.12□□□□□ -2.07
XRN1YGL173C RGM1Q00453 211 aa2.12□□□□□ -2.07
XRN1YGL173C RPA12P32529 125 aaKnown RBP2.12□□□□□ -2.07
XRN1YGL173C MRPL31P14063 131 aaPredicted RBP2.11□□□□□ -2.07
XRN1YGL173C MIX17Q03667 156 aa2.11□□□□□ -2.07
XRN1YGL173C CCW12Q12127 133 aa2.11□□□□□ -2.07
XRN1YGL173C SSS1P35179 80 aa2.1□□□□□ -2.07
XRN1YGL173C ICS3P47034 131 aa2.1□□□□□ -2.07
XRN1YGL173C YGR240C-AQ3E786 66 aa2.1□□□□□ -2.07
XRN1YGL173C YPR145C-AQ2V2P0 78 aa2.09□□□□□ -2.07
XRN1YGL173C RDS3Q06835 107 aaPredicted RBP2.09□□□□□ -2.07
XRN1YGL173C MRX7P53869 86 aa2.09□□□□□ -2.08
XRN1YGL173C AVO2Q04749 426 aa2.08□□□□□ -2.08
XRN1YGL173C YMR007WQ03675 126 aa2.08□□□□□ -2.08
XRN1YGL173C AIM19P40502 157 aa2.08□□□□□ -2.08
XRN1YGL173C SGF11Q03067 99 aa2.08□□□□□ -2.08
XRN1YGL173C YDR010CQ12426 110 aa2.08□□□□□ -2.08
XRN1YGL173C YNR034W-AQ3E841 98 aa2.08□□□□□ -2.08
XRN1YGL173C AQY2P0CD90 149 aa2.07□□□□□ -2.08
XRN1YGL173C HOR7Q05827 59 aa2.07□□□□□ -2.08
XRN1YGL173C YOR072WQ08486 104 aa2.07□□□□□ -2.08
XRN1YGL173C YHL005CP38752 130 aa2.07□□□□□ -2.08
XRN1YGL173C YLR146W-AQ2V2P1 62 aa2.07□□□□□ -2.08
XRN1YGL173C YJL009WP47078 108 aa2.07□□□□□ -2.08
XRN1YGL173C COX12Q01519 83 aa2.07□□□□□ -2.08
XRN1YGL173C YBR292CP38357 123 aa2.06□□□□□ -2.08
XRN1YGL173C BSC4P53841 131 aa2.06□□□□□ -2.08
XRN1YGL173C COX9P07255 59 aa2.06□□□□□ -2.08
XRN1YGL173C TOM6P33448 61 aa2.05□□□□□ -2.08
XRN1YGL173C YMR105W-AQ8TGS8 64 aa2.04□□□□□ -2.08
XRN1YGL173C MPC2P38857 129 aa2.04□□□□□ -2.08
XRN1YGL173C YMR082CQ04276 118 aa2.04□□□□□ -2.08
XRN1YGL173C YHR212W-AP0CX91 67 aa2.04□□□□□ -2.08
XRN1YGL173C HUG1Q6Q5K6 68 aa2.03□□□□□ -2.08
XRN1YGL173C YOL013W-AP0C272 63 aaPredicted RBP2.03□□□□□ -2.08
XRN1YGL173C YJR107C-AP0CT86 78 aa2.03□□□□□ -2.09
XRN1YGL173C MRPL38P35996 138 aaPredicted RBP2.03□□□□□ -2.09
XRN1YGL173C YDR381C-AQ3E6R5 114 aa2.03□□□□□ -2.09
XRN1YGL173C HHY1P39982 102 aa2.02□□□□□ -2.09
XRN1YGL173C YIL102CP40488 101 aa2.02□□□□□ -2.09
XRN1YGL173C YCR001WP25347 104 aa2.01□□□□□ -2.09
XRN1YGL173C SHU1P38751 150 aa2.01□□□□□ -2.09
XRN1YGL173C YBR201C-AQ2V2Q3 67 aa2.01□□□□□ -2.09
XRN1YGL173C YHR173CP38864 112 aa2□□□□□ -2.09
XRN1YGL173C GIS2P53849 153 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
XRN1YGL173C PAU7P39545 55 aa2□□□□□ -2.09
XRN1YGL173C Q0032Q9ZZX7 96 aa2□□□□□ -2.09
XRN1YGL173C YKL065W-AQ2V2P2 73 aa2□□□□□ -2.09
XRN1YGL173C SDH6Q3E785 79 aa1.98□□□□□ -2.09
XRN1YGL173C QCR9P22289 66 aa1.98□□□□□ -2.09
XRN1YGL173C YIL134C-AQ45U18 67 aa1.98□□□□□ -2.09
XRN1YGL173C YOR314WQ12506 109 aa1.96□□□□□ -2.09
XRN1YGL173C YHR213W-BQ8TGK1 99 aa1.96□□□□□ -2.09
XRN1YGL173C YAR064WP39563 99 aa1.96□□□□□ -2.1
XRN1YGL173C LCL1Q02786 101 aa1.96□□□□□ -2.1
XRN1YGL173C MGR2Q02889 113 aa1.96□□□□□ -2.1
XRN1YGL173C YJR128WP47162 119 aa1.96□□□□□ -2.1
XRN1YGL173C ATP18P81450 59 aa1.95□□□□□ -2.1
XRN1YGL173C YOR011W-AQ3E807 68 aa1.95□□□□□ -2.1
XRN1YGL173C SWM2P40342 146 aa1.95□□□□□ -2.1
XRN1YGL173C YHR086W-AQ3E746 53 aa1.95□□□□□ -2.1
XRN1YGL173C NOP10Q6Q547 58 aaPredicted RBP1.95□□□□□ -2.1
XRN1YGL173C RPL38P49167 78 aaKnown RBP1.95□□□□□ -2.1
XRN1YGL173C YOR192C-CQ3E736 78 aa1.95□□□□□ -2.1
XRN1YGL173C POC4Q12245 148 aaPredicted RBP1.95□□□□□ -2.1
XRN1YGL173C YFL041W-AQ3E817 63 aa1.95□□□□□ -2.1
XRN1YGL173C YNL042W-BQ3E7Z2 85 aa1.94□□□□□ -2.1
XRN1YGL173C YER188C-AP0C0V2 99 aa1.94□□□□□ -2.1
XRN1YGL173C YMR141CP40211 102 aa1.94□□□□□ -2.1
XRN1YGL173C YAL065CO13511 128 aa1.94□□□□□ -2.1
XRN1YGL173C MRPS12P53732 153 aa1.93□□□□□ -2.1
XRN1YGL173C YGL258W-AQ3E740 77 aa1.93□□□□□ -2.1
XRN1YGL173C YIL102C-AQ2V2P5 75 aa1.93□□□□□ -2.1
XRN1YGL173C YNL122CP53921 115 aaPredicted RBP1.93□□□□□ -2.1
XRN1YGL173C YSY6P38374 65 aa1.93□□□□□ -2.1
XRN1YGL173C SPI1P40092 148 aa1.92□□□□□ -2.1
XRN1YGL173C YPR108W-AQ3E7B3 70 aa1.92□□□□□ -2.1
XRN1YGL173C VMA9Q3E7B6 73 aa1.92□□□□□ -2.1
XRN1YGL173C HUB1Q6Q546 73 aa1.91□□□□□ -2.1
XRN1YGL173C YNL190WP53872 204 aa1.91□□□□□ -2.1
XRN1YGL173C COX7P10174 60 aa1.91□□□□□ -2.1
XRN1YGL173C YBR072C-AQ3E794 53 aa1.91□□□□□ -2.1
XRN1YGL173C RPS11AP0CX47 156 aaKnown RBP1.9□□□□□ -2.11
XRN1YGL173C RPS11BP0CX48 156 aaKnown RBP1.9□□□□□ -2.11
XRN1YGL173C RPC10P40422 70 aa1.9□□□□□ -2.11
XRN1YGL173C YPR010C-AA5Z2X5 72 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms