RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C YDR010CQ12426 110 aa3.64□□□□□ -1.83
SHO1YER118C YLR255CO13574 117 aa3.63□□□□□ -1.83
SHO1YER118C YOL131WQ08270 108 aa3.63□□□□□ -1.83
SHO1YER118C YOR072WQ08486 104 aa3.63□□□□□ -1.83
SHO1YER118C YFL041W-AQ3E817 63 aa3.63□□□□□ -1.83
SHO1YER118C YAR064WP39563 99 aa3.61□□□□□ -1.83
SHO1YER118C SMX2P40204 77 aaKnown RBP3.61□□□□□ -1.83
SHO1YER118C YCR001WP25347 104 aa3.6□□□□□ -1.83
SHO1YER118C LCL1Q02786 101 aa3.6□□□□□ -1.83
SHO1YER118C YAL065CO13511 128 aa3.59□□□□□ -1.83
SHO1YER118C YOL013W-AP0C272 63 aaPredicted RBP3.59□□□□□ -1.83
SHO1YER118C TIM12P32830 109 aa3.59□□□□□ -1.83
SHO1YER118C FPR2P32472 135 aa3.58□□□□□ -1.84
SHO1YER118C MGR2Q02889 113 aa3.58□□□□□ -1.84
SHO1YER118C SLH1P53327 1967 aaKnown RBP3.57□□□□□ -1.84
SHO1YER118C YGR121W-AQ3E816 71 aa3.57□□□□□ -1.84
SHO1YER118C ECM29P38737 1868 aa3.56□□□□□ -1.84
SHO1YER118C YBR032WP38223 100 aa3.56□□□□□ -1.84
SHO1YER118C YIL086CP40503 102 aa3.56□□□□□ -1.84
SHO1YER118C MVB12P42939 101 aa3.56□□□□□ -1.84
SHO1YER118C NOP10Q6Q547 58 aaPredicted RBP3.56□□□□□ -1.84
SHO1YER118C QCR9P22289 66 aa3.55□□□□□ -1.84
SHO1YER118C YIL156W-BQ2V2P4 73 aa3.55□□□□□ -1.84
SHO1YER118C HUG1Q6Q5K6 68 aa3.55□□□□□ -1.84
SHO1YER118C VPS13Q07878 3144 aa3.55□□□□□ -1.84
SHO1YER118C MOT1P32333 1867 aa3.54□□□□□ -1.84
SHO1YER118C ACC1Q00955 2233 aaKnown RBP3.53□□□□□ -1.84
SHO1YER118C SHU1P38751 150 aa3.52□□□□□ -1.85
SHO1YER118C COX19Q3E731 98 aa3.52□□□□□ -1.85
SHO1YER118C YNL198CP40166 100 aa3.51□□□□□ -1.85
SHO1YER118C YHR173CP38864 112 aa3.5□□□□□ -1.85
SHO1YER118C YDR524C-BQ3E6R4 66 aa3.5□□□□□ -1.85
SHO1YER118C YMR007WQ03675 126 aa3.49□□□□□ -1.85
SHO1YER118C YIL102CP40488 101 aa3.47□□□□□ -1.85
SHO1YER118C YNL042W-BQ3E7Z2 85 aa3.46□□□□□ -1.86
SHO1YER118C YGR035W-AQ45U48 73 aa3.46□□□□□ -1.86
SHO1YER118C YJR128WP47162 119 aa3.45□□□□□ -1.86
SHO1YER118C VMA9Q3E7B6 73 aa3.45□□□□□ -1.86
SHO1YER118C YIL134C-AQ45U18 67 aa3.43□□□□□ -1.86
SHO1YER118C YMR122W-AQ3E842 84 aa3.42□□□□□ -1.86
SHO1YER118C BRR2P32639 2163 aaKnown RBP3.42□□□□□ -1.86
SHO1YER118C YBR201C-AQ2V2Q3 67 aa3.41□□□□□ -1.86
SHO1YER118C YDL022C-AP0C5L6 82 aa3.4□□□□□ -1.87
SHO1YER118C SPI1P40092 148 aa3.4□□□□□ -1.87
SHO1YER118C Q0032Q9ZZX7 96 aa3.39□□□□□ -1.87
SHO1YER118C ERI1P62651 68 aaKnown RBP3.38□□□□□ -1.87
SHO1YER118C HHY1P39982 102 aa3.37□□□□□ -1.87
SHO1YER118C YIL102C-AQ2V2P5 75 aa3.37□□□□□ -1.87
SHO1YER118C YKL018C-AQ3E7A7 99 aa3.36□□□□□ -1.87
SHO1YER118C PAU7P39545 55 aa3.35□□□□□ -1.87
SHO1YER118C TAO3P40468 2376 aa3.34□□□□□ -1.87
SHO1YER118C YSY6P38374 65 aa3.33□□□□□ -1.88
SHO1YER118C SGF11Q03067 99 aa3.33□□□□□ -1.88
SHO1YER118C ATP18P81450 59 aa3.31□□□□□ -1.88
SHO1YER118C YDR246W-AQ3E763 66 aa3.31□□□□□ -1.88
SHO1YER118C YOR032W-AQ8TGS1 66 aa3.31□□□□□ -1.88
SHO1YER118C STT4P37297 1900 aa3.31□□□□□ -1.88
SHO1YER118C YHR213W-BQ8TGK1 99 aa3.3□□□□□ -1.88
SHO1YER118C YMR141CP40211 102 aa3.28□□□□□ -1.88
SHO1YER118C SEC16P48415 2195 aaKnown RBP3.28□□□□□ -1.88
SHO1YER118C COX7P10174 60 aa3.27□□□□□ -1.89
SHO1YER118C YDR034W-BQ6Q5X2 51 aa3.27□□□□□ -1.89
SHO1YER118C HUA1P40325 198 aa3.25□□□□□ -1.89
SHO1YER118C ATP17Q06405 101 aa3.25□□□□□ -1.89
SHO1YER118C YOL097W-AQ3E7Y9 61 aa3.23□□□□□ -1.89
SHO1YER118C HFA1P32874 2273 aa3.22□□□□□ -1.89
SHO1YER118C YNL190WP53872 204 aa3.22□□□□□ -1.89
SHO1YER118C YOR034C-AQ3E735 80 aa3.21□□□□□ -1.9
SHO1YER118C SDH6Q3E785 79 aa3.2□□□□□ -1.9
SHO1YER118C YBR072C-AQ3E794 53 aa3.2□□□□□ -1.9
SHO1YER118C RPL38P49167 78 aaKnown RBP3.17□□□□□ -1.9
SHO1YER118C BEM2P39960 2167 aaKnown RBP3.17□□□□□ -1.9
SHO1YER118C YPR117WQ06116 2489 aa3.16□□□□□ -1.9
SHO1YER118C RPC10P40422 70 aa3.15□□□□□ -1.91
SHO1YER118C YDR182W-AQ3E796 67 aa3.15□□□□□ -1.91
SHO1YER118C CSF1Q12150 2958 aa3.14□□□□□ -1.91
SHO1YER118C COX9P07255 59 aa3.13□□□□□ -1.91
SHO1YER118C AUA1P32450 94 aa3.13□□□□□ -1.91
SHO1YER118C RPS27AP35997 82 aaKnown RBP3.13□□□□□ -1.91
SHO1YER118C RPS27BP38711 82 aa3.13□□□□□ -1.91
SHO1YER118C NCE101Q02820 53 aa3.13□□□□□ -1.91
SHO1YER118C RPS30AP0CX33 63 aaKnown RBP3.12□□□□□ -1.91
SHO1YER118C RPS30BP0CX34 63 aaKnown RBP3.12□□□□□ -1.91
SHO1YER118C YPR108W-AQ3E7B3 70 aa3.12□□□□□ -1.91
SHO1YER118C POL2P21951 2222 aaKnown RBP3.12□□□□□ -1.91
SHO1YER118C HUB1Q6Q546 73 aa3.11□□□□□ -1.91
SHO1YER118C BPH1P25356 2167 aa3.1□□□□□ -1.91
SHO1YER118C YKL023C-AQ2V2P3 75 aa3.1□□□□□ -1.91
SHO1YER118C YIL046W-AQ3E7Z4 54 aa3.08□□□□□ -1.92
SHO1YER118C IRA2P19158 3079 aa3.08□□□□□ -1.92
SHO1YER118C FMP27Q06179 2628 aa3.07□□□□□ -1.92
SHO1YER118C RPL43AP0CX25 92 aaKnown RBP3.06□□□□□ -1.92
SHO1YER118C RPL43BP0CX26 92 aa3.06□□□□□ -1.92
SHO1YER118C IRA1P18963 3092 aa3.06□□□□□ -1.92
SHO1YER118C EDC1P53080 175 aaPredicted RBP3.05□□□□□ -1.92
SHO1YER118C YJR107C-AP0CT86 78 aa3.04□□□□□ -1.92
SHO1YER118C YLR146W-AQ2V2P1 62 aa3.02□□□□□ -1.93
SHO1YER118C TRA1P38811 3744 aa3.02□□□□□ -1.93
SHO1YER118C BLM10P43583 2143 aa3.01□□□□□ -1.93
SHO1YER118C YOL166W-AQ8TGJ1 51 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms