RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W RPS11BP0CX48 156 aaKnown RBP3.12□□□□□ -1.91
SSB1YDL229W SNA2P56508 79 aa3.12□□□□□ -1.91
SSB1YDL229W ECM19Q06011 112 aa3.12□□□□□ -1.91
SSB1YDL229W YPR013CQ12145 317 aa3.12□□□□□ -1.91
SSB1YDL229W IGD1P43598 195 aa3.12□□□□□ -1.91
SSB1YDL229W YLR111WQ12528 110 aa3.1□□□□□ -1.91
SSB1YDL229W YER078W-AQ3E7A2 54 aa3.1□□□□□ -1.91
SSB1YDL229W YDR034W-BQ6Q5X2 51 aa3.1□□□□□ -1.91
SSB1YDL229W YLR236CA0A023PZG4 107 aa3.09□□□□□ -1.91
SSB1YDL229W BSC4P53841 131 aa3.09□□□□□ -1.91
SSB1YDL229W CCW12Q12127 133 aa3.09□□□□□ -1.91
SSB1YDL229W YOR008C-AQ3E7B9 74 aa3.09□□□□□ -1.91
SSB1YDL229W QCR8P08525 94 aa3.09□□□□□ -1.92
SSB1YDL229W ATP18P81450 59 aa3.09□□□□□ -1.92
SSB1YDL229W YGL258W-AQ3E740 77 aa3.09□□□□□ -1.92
SSB1YDL229W SEN1Q00416 2231 aaKnown RBP3.09□□□□□ -1.92
SSB1YDL229W YSF3P0C074 85 aaPredicted RBP3.07□□□□□ -1.92
SSB1YDL229W FPR1P20081 114 aaKnown RBP3.07□□□□□ -1.92
SSB1YDL229W YBR219CP38317 127 aa3.07□□□□□ -1.92
SSB1YDL229W YIL102CP40488 101 aa3.07□□□□□ -1.92
SSB1YDL229W YFR009W-AP0C5M9 85 aa3.06□□□□□ -1.92
SSB1YDL229W YCR022CP25620 114 aa3.06□□□□□ -1.92
SSB1YDL229W YBR027CP38220 110 aa3.05□□□□□ -1.92
SSB1YDL229W FAB1P34756 2278 aa3.05□□□□□ -1.92
SSB1YDL229W AQY2P0CD90 149 aa3.05□□□□□ -1.92
SSB1YDL229W CMC4Q3E7A9 73 aa3.05□□□□□ -1.92
SSB1YDL229W YLR342W-AQ3E810 57 aa3.05□□□□□ -1.92
SSB1YDL229W COX14P39103 70 aa3.04□□□□□ -1.92
SSB1YDL229W YJR146WP47174 117 aa3.04□□□□□ -1.92
SSB1YDL229W HUB1Q6Q546 73 aa3.04□□□□□ -1.92
SSB1YDL229W YCR001WP25347 104 aa3.03□□□□□ -1.92
SSB1YDL229W ATP17Q06405 101 aa3.03□□□□□ -1.92
SSB1YDL229W LCL2Q08045 131 aa3.03□□□□□ -1.92
SSB1YDL229W BEM2P39960 2167 aaKnown RBP3.03□□□□□ -1.92
SSB1YDL229W TOR2P32600 2474 aaKnown RBP3.03□□□□□ -1.92
SSB1YDL229W YPR010C-AA5Z2X5 72 aa3.03□□□□□ -1.93
SSB1YDL229W YLR157W-DP0CE99 70 aa3.02□□□□□ -1.93
SSB1YDL229W YHR125WP38831 101 aa3.01□□□□□ -1.93
SSB1YDL229W YMR001C-AQ8TGS9 76 aa3.01□□□□□ -1.93
SSB1YDL229W FMP27Q06179 2628 aa3.01□□□□□ -1.93
SSB1YDL229W YMR254CQ04838 102 aa3□□□□□ -1.93
SSB1YDL229W IRA2P19158 3079 aa3□□□□□ -1.93
SSB1YDL229W YCL048W-AQ2V2Q2 79 aa2.99□□□□□ -1.93
SSB1YDL229W SDH6Q3E785 79 aa2.99□□□□□ -1.93
SSB1YDL229W YGL014C-AP0C5N1 53 aa2.98□□□□□ -1.93
SSB1YDL229W YEL008WP40001 126 aa2.98□□□□□ -1.93
SSB1YDL229W YJL027CP47063 138 aaPredicted RBP2.98□□□□□ -1.93
SSB1YDL229W YNL122CP53921 115 aaPredicted RBP2.98□□□□□ -1.93
SSB1YDL229W NCE101Q02820 53 aa2.98□□□□□ -1.93
SSB1YDL229W YDR210WQ03482 75 aa2.98□□□□□ -1.93
SSB1YDL229W YDR114CQ04597 100 aa2.98□□□□□ -1.93
SSB1YDL229W YOL013W-AP0C272 63 aaPredicted RBP2.98□□□□□ -1.93
SSB1YDL229W SEC16P48415 2195 aaKnown RBP2.97□□□□□ -1.93
SSB1YDL229W SGF11Q03067 99 aa2.97□□□□□ -1.93
SSB1YDL229W VAM10Q08474 114 aa2.96□□□□□ -1.94
SSB1YDL229W YMR122W-AQ3E842 84 aa2.96□□□□□ -1.94
SSB1YDL229W YHR032W-AP0C5N6 59 aa2.96□□□□□ -1.94
SSB1YDL229W YEL014CP39999 101 aa2.96□□□□□ -1.94
SSB1YDL229W YJR085CP47131 105 aaKnown RBP2.96□□□□□ -1.94
SSB1YDL229W YLL006W-AQ3E814 58 aa2.96□□□□□ -1.94
SSB1YDL229W IRA1P18963 3092 aa2.95□□□□□ -1.94
SSB1YDL229W CSF1Q12150 2958 aa2.94□□□□□ -1.94
SSB1YDL229W YPR195CQ06594 109 aa2.93□□□□□ -1.94
SSB1YDL229W Q0032Q9ZZX7 96 aa2.93□□□□□ -1.94
SSB1YDL229W YOL085CQ99345 113 aa2.92□□□□□ -1.94
SSB1YDL229W YGR025WP53216 100 aa2.91□□□□□ -1.94
SSB1YDL229W ACC1Q00955 2233 aaKnown RBP2.91□□□□□ -1.94
SSB1YDL229W YBR200W-AQ3E755 54 aa2.91□□□□□ -1.94
SSB1YDL229W YDR115WQ04598 105 aa2.9□□□□□ -1.95
SSB1YDL229W COX8P04039 78 aa2.89□□□□□ -1.95
SSB1YDL229W YKR073CP36153 106 aa2.89□□□□□ -1.95
SSB1YDL229W SIP18P50263 79 aa2.89□□□□□ -1.95
SSB1YDL229W YHR213W-BQ8TGK1 99 aa2.89□□□□□ -1.95
SSB1YDL229W TEL1P38110 2787 aa2.89□□□□□ -1.95
SSB1YDL229W YBL039W-BP0C268 59 aa2.88□□□□□ -1.95
SSB1YDL229W YDL012CQ12489 107 aa2.88□□□□□ -1.95
SSB1YDL229W AUA1P32450 94 aa2.87□□□□□ -1.95
SSB1YDL229W YBR201C-AQ2V2Q3 67 aa2.87□□□□□ -1.95
SSB1YDL229W YJL133C-AQ3E7A3 74 aa2.87□□□□□ -1.95
SSB1YDL229W POL2P21951 2222 aaKnown RBP2.87□□□□□ -1.95
SSB1YDL229W YLR255CO13574 117 aa2.86□□□□□ -1.95
SSB1YDL229W YCL042WP25572 119 aa2.86□□□□□ -1.95
SSB1YDL229W MVB12P42939 101 aa2.86□□□□□ -1.95
SSB1YDL229W HFA1P32874 2273 aa2.85□□□□□ -1.95
SSB1YDL229W TOR1P35169 2470 aa2.85□□□□□ -1.95
SSB1YDL229W RPS27AP35997 82 aaKnown RBP2.85□□□□□ -1.95
SSB1YDL229W RPS27BP38711 82 aa2.85□□□□□ -1.95
SSB1YDL229W RPL33BP41056 107 aaKnown RBP2.83□□□□□ -1.96
SSB1YDL229W YOR072WQ08486 104 aa2.83□□□□□ -1.96
SSB1YDL229W YAL067W-AQ8TGK6 75 aa2.83□□□□□ -1.96
SSB1YDL229W YER084WP40057 128 aa2.82□□□□□ -1.96
SSB1YDL229W YIL086CP40503 102 aa2.82□□□□□ -1.96
SSB1YDL229W YGL041C-BQ3E750 60 aa2.8□□□□□ -1.96
SSB1YDL229W GCN1P33892 2672 aaKnown RBP2.8□□□□□ -1.96
SSB1YDL229W RPL29P05747 59 aaPredicted RBP2.79□□□□□ -1.96
SSB1YDL229W YAR064WP39563 99 aa2.79□□□□□ -1.96
SSB1YDL229W YIL046W-AQ3E7Z4 54 aa2.79□□□□□ -1.96
SSB1YDL229W URA2P07259 2214 aaKnown RBP2.79□□□□□ -1.96
SSB1YDL229W RPL33AP05744 107 aaKnown RBP2.79□□□□□ -1.96
SSB1YDL229W YNL162W-AQ3E7A8 72 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms