RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeastyeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF3YDL194W YNL190WP53872 204 aa3.43□□□□□ -1.86
SNF3YDL194W GLT1Q12680 2145 aaKnown RBP3.43□□□□□ -1.86
SNF3YDL194W CCW14O13547 238 aa3.43□□□□□ -1.86
SNF3YDL194W YPR096CO13587 100 aa3.42□□□□□ -1.86
SNF3YDL194W YOL166W-AQ8TGJ1 51 aa3.4□□□□□ -1.86
SNF3YDL194W LCL2Q08045 131 aa3.4□□□□□ -1.87
SNF3YDL194W CCW12Q12127 133 aa3.4□□□□□ -1.87
SNF3YDL194W RPS11AP0CX47 156 aaKnown RBP3.39□□□□□ -1.87
SNF3YDL194W RPS11BP0CX48 156 aaKnown RBP3.39□□□□□ -1.87
SNF3YDL194W YPR053CQ6Q5F3 151 aa3.39□□□□□ -1.87
SNF3YDL194W FLO1P32768 1537 aa3.39□□□□□ -1.87
SNF3YDL194W BRR2P32639 2163 aaKnown RBP3.39□□□□□ -1.87
SNF3YDL194W YBR219CP38317 127 aa3.38□□□□□ -1.87
SNF3YDL194W YDR210WQ03482 75 aa3.38□□□□□ -1.87
SNF3YDL194W YSF3P0C074 85 aaPredicted RBP3.38□□□□□ -1.87
SNF3YDL194W RPL33AP05744 107 aaKnown RBP3.37□□□□□ -1.87
SNF3YDL194W HUB1Q6Q546 73 aa3.37□□□□□ -1.87
SNF3YDL194W YJL144WP47009 104 aa3.37□□□□□ -1.87
SNF3YDL194W ACC1Q00955 2233 aaKnown RBP3.36□□□□□ -1.87
SNF3YDL194W MRPS12P53732 153 aa3.36□□□□□ -1.87
SNF3YDL194W YGL041C-BQ3E750 60 aa3.36□□□□□ -1.87
SNF3YDL194W ATP17Q06405 101 aa3.35□□□□□ -1.87
SNF3YDL194W FIG2P25653 1609 aa3.35□□□□□ -1.87
SNF3YDL194W YER084WP40057 128 aa3.35□□□□□ -1.87
SNF3YDL194W YCR001WP25347 104 aa3.34□□□□□ -1.87
SNF3YDL194W SGF11Q03067 99 aa3.34□□□□□ -1.87
SNF3YDL194W YHR007C-AQ07074 71 aa3.33□□□□□ -1.88
SNF3YDL194W YNL122CP53921 115 aaPredicted RBP3.32□□□□□ -1.88
SNF3YDL194W TAR1Q8TGM6 124 aa3.32□□□□□ -1.88
SNF3YDL194W COA2Q3E823 68 aa3.32□□□□□ -1.88
SNF3YDL194W YJR146WP47174 117 aa3.31□□□□□ -1.88
SNF3YDL194W YMR122W-AQ3E842 84 aa3.31□□□□□ -1.88
SNF3YDL194W VAM10Q08474 114 aa3.3□□□□□ -1.88
SNF3YDL194W AQY2P0CD90 149 aa3.3□□□□□ -1.88
SNF3YDL194W SHU1P38751 150 aa3.28□□□□□ -1.88
SNF3YDL194W MGR2Q02889 113 aa3.28□□□□□ -1.88
SNF3YDL194W YBR201C-AQ2V2Q3 67 aa3.27□□□□□ -1.89
SNF3YDL194W YGR240C-AQ3E786 66 aa3.27□□□□□ -1.89
SNF3YDL194W HKR1P41809 1802 aa3.26□□□□□ -1.89
SNF3YDL194W YLR255CO13574 117 aa3.26□□□□□ -1.89
SNF3YDL194W RPL38P49167 78 aaKnown RBP3.26□□□□□ -1.89
SNF3YDL194W YMR007WQ03675 126 aa3.26□□□□□ -1.89
SNF3YDL194W YMR001C-AQ8TGS9 76 aa3.25□□□□□ -1.89
SNF3YDL194W COX9P07255 59 aa3.25□□□□□ -1.89
SNF3YDL194W YLR157W-DP0CE99 70 aa3.25□□□□□ -1.89
SNF3YDL194W YDR114CQ04597 100 aa3.25□□□□□ -1.89
SNF3YDL194W YEL008WP40001 126 aa3.24□□□□□ -1.89
SNF3YDL194W YIL102CP40488 101 aa3.24□□□□□ -1.89
SNF3YDL194W TOM1Q03280 3268 aa3.23□□□□□ -1.89
SNF3YDL194W SDH6Q3E785 79 aa3.23□□□□□ -1.89
SNF3YDL194W YJR107C-AP0CT86 78 aa3.22□□□□□ -1.89
SNF3YDL194W MVB12P42939 101 aa3.22□□□□□ -1.89
SNF3YDL194W ATP18P81450 59 aa3.22□□□□□ -1.89
SNF3YDL194W Q0032Q9ZZX7 96 aa3.22□□□□□ -1.89
SNF3YDL194W RDS3Q06835 107 aaPredicted RBP3.21□□□□□ -1.9
SNF3YDL194W BLM10P43583 2143 aa3.19□□□□□ -1.9
SNF3YDL194W YOL097W-AQ3E7Y9 61 aa3.18□□□□□ -1.9
SNF3YDL194W TOS6P48560 102 aa3.17□□□□□ -1.9
SNF3YDL194W YNL162W-AQ3E7A8 72 aa3.16□□□□□ -1.9
SNF3YDL194W HUA1P40325 198 aa3.16□□□□□ -1.9
SNF3YDL194W YIL086CP40503 102 aa3.16□□□□□ -1.9
SNF3YDL194W YMR230W-AQ3E7B5 62 aa3.16□□□□□ -1.9
SNF3YDL194W YBL039W-BP0C268 59 aa3.15□□□□□ -1.91
SNF3YDL194W LCL1Q02786 101 aa3.15□□□□□ -1.91
SNF3YDL194W YPR010C-AA5Z2X5 72 aa3.14□□□□□ -1.91
SNF3YDL194W BEM2P39960 2167 aaKnown RBP3.14□□□□□ -1.91
SNF3YDL194W YMR141CP40211 102 aa3.14□□□□□ -1.91
SNF3YDL194W YOR072WQ08486 104 aa3.12□□□□□ -1.91
SNF3YDL194W YDL012CQ12489 107 aa3.12□□□□□ -1.91
SNF3YDL194W TOM7P53507 60 aa3.11□□□□□ -1.91
SNF3YDL194W YPR108W-AQ3E7B3 70 aa3.1□□□□□ -1.91
SNF3YDL194W YOL013W-AP0C272 63 aaPredicted RBP3.1□□□□□ -1.91
SNF3YDL194W YCL042WP25572 119 aa3.09□□□□□ -1.91
SNF3YDL194W YFR009W-AP0C5M9 85 aa3.09□□□□□ -1.91
SNF3YDL194W COX7P10174 60 aa3.08□□□□□ -1.92
SNF3YDL194W YBR200W-AQ3E755 54 aa3.08□□□□□ -1.92
SNF3YDL194W YJL009WP47078 108 aa3.07□□□□□ -1.92
SNF3YDL194W YOR008C-AQ3E7B9 74 aa3.07□□□□□ -1.92
SNF3YDL194W YJR128WP47162 119 aa3.06□□□□□ -1.92
SNF3YDL194W HUG1Q6Q5K6 68 aa3.06□□□□□ -1.92
SNF3YDL194W YGL260WP53056 76 aa3.05□□□□□ -1.92
SNF3YDL194W YNL146C-AQ3E7Z1 64 aa3.05□□□□□ -1.92
SNF3YDL194W YOR011W-AQ3E807 68 aa3.05□□□□□ -1.92
SNF3YDL194W VPS13Q07878 3144 aa3.04□□□□□ -1.92
SNF3YDL194W YGR025WP53216 100 aa3.03□□□□□ -1.92
SNF3YDL194W YDR524C-BQ3E6R4 66 aa3.03□□□□□ -1.92
SNF3YDL194W POL2P21951 2222 aaKnown RBP3.02□□□□□ -1.93
SNF3YDL194W URA2P07259 2214 aaKnown RBP2.99□□□□□ -1.93
SNF3YDL194W YLR342W-AQ3E810 57 aa2.99□□□□□ -1.93
SNF3YDL194W SEN1Q00416 2231 aaKnown RBP2.99□□□□□ -1.93
SNF3YDL194W YOR394C-AQ8TGJ0 55 aa2.98□□□□□ -1.93
SNF3YDL194W FAB1P34756 2278 aa2.98□□□□□ -1.93
SNF3YDL194W SEC16P48415 2195 aaKnown RBP2.97□□□□□ -1.93
SNF3YDL194W AUA1P32450 94 aa2.97□□□□□ -1.93
SNF3YDL194W RPC10P40422 70 aa2.95□□□□□ -1.94
SNF3YDL194W GIS2P53849 153 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
SNF3YDL194W YHR213W-BQ8TGK1 99 aa2.93□□□□□ -1.94
SNF3YDL194W YBR230W-AQ3E762 66 aa2.92□□□□□ -1.94
SNF3YDL194W SIP18P50263 79 aa2.92□□□□□ -1.94
SNF3YDL194W OLI1P61829 76 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 66.8 ms