RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W RPL36BO14455 100 aaKnown RBP0.89□□□□□ -2.27
TRM3YDL112W YNL184CP53876 108 aa0.89□□□□□ -2.27
TRM3YDL112W CUE4Q04201 117 aaPredicted RBP0.89□□□□□ -2.27
TRM3YDL112W RPL28P02406 149 aaKnown RBP0.89□□□□□ -2.27
TRM3YDL112W YBR027CP38220 110 aa0.89□□□□□ -2.27
TRM3YDL112W YHR130CP38834 111 aa0.89□□□□□ -2.27
TRM3YDL112W OST2P46964 130 aa0.89□□□□□ -2.27
TRM3YDL112W YLR157W-DP0CE99 70 aa0.89□□□□□ -2.27
TRM3YDL112W YGL230CP53074 147 aa0.89□□□□□ -2.27
TRM3YDL112W YHR007C-AQ07074 71 aa0.88□□□□□ -2.27
TRM3YDL112W YHR073W-AP0C5N7 58 aa0.88□□□□□ -2.27
TRM3YDL112W MRPL44P19956 98 aa0.88□□□□□ -2.27
TRM3YDL112W POP7P38291 140 aa0.88□□□□□ -2.27
TRM3YDL112W BET1P22804 142 aa0.88□□□□□ -2.27
TRM3YDL112W YAR1P46683 200 aa0.88□□□□□ -2.27
TRM3YDL112W YDR210WQ03482 75 aa0.88□□□□□ -2.27
TRM3YDL112W FYV7Q12247 151 aa0.88□□□□□ -2.27
TRM3YDL112W MID2P36027 376 aa0.87□□□□□ -2.27
TRM3YDL112W DSE2P38844 325 aa0.87□□□□□ -2.27
TRM3YDL112W RSM18P40033 138 aa0.87□□□□□ -2.27
TRM3YDL112W YGR164WP53291 111 aa0.87□□□□□ -2.27
TRM3YDL112W RSM19P53733 91 aaPredicted RBP0.87□□□□□ -2.27
TRM3YDL112W YDL157CQ12082 118 aa0.86□□□□□ -2.27
TRM3YDL112W YJR128WP47162 119 aa0.86□□□□□ -2.27
TRM3YDL112W YDL012CQ12489 107 aa0.86□□□□□ -2.27
TRM3YDL112W YLR162WQ06235 118 aa0.86□□□□□ -2.27
TRM3YDL112W MSL1P40567 111 aaPredicted RBP0.85□□□□□ -2.27
TRM3YDL112W CWC27Q02770 301 aa0.85□□□□□ -2.27
TRM3YDL112W YLR296WQ05898 108 aa0.85□□□□□ -2.27
TRM3YDL112W YHR139C-AO13536 103 aa0.85□□□□□ -2.27
TRM3YDL112W ECM19Q06011 112 aa0.85□□□□□ -2.27
TRM3YDL112W RPS29AP41057 56 aaKnown RBP0.85□□□□□ -2.27
TRM3YDL112W RPS29BP41058 56 aaKnown RBP0.85□□□□□ -2.27
TRM3YDL112W TSC3Q3E790 80 aa0.85□□□□□ -2.27
TRM3YDL112W ISD11Q6Q560 94 aa0.84□□□□□ -2.27
TRM3YDL112W MIC10Q96VH5 97 aa0.84□□□□□ -2.27
TRM3YDL112W YGL034CP53186 121 aa0.84□□□□□ -2.27
TRM3YDL112W MPC3P53311 146 aa0.84□□□□□ -2.27
TRM3YDL112W HUR1P45820 110 aa0.84□□□□□ -2.28
TRM3YDL112W COX23P38824 151 aa0.83□□□□□ -2.28
TRM3YDL112W ATP18P81450 59 aa0.83□□□□□ -2.28
TRM3YDL112W YIL002W-AQ3E7Z5 69 aa0.83□□□□□ -2.28
TRM3YDL112W YJL009WP47078 108 aa0.83□□□□□ -2.28
TRM3YDL112W ELC1Q03071 99 aa0.83□□□□□ -2.28
TRM3YDL112W LSM6Q06406 86 aaKnown RBP0.83□□□□□ -2.28
TRM3YDL112W YLR255CO13574 117 aa0.83□□□□□ -2.28
TRM3YDL112W YER181CP40097 107 aa0.83□□□□□ -2.28
TRM3YDL112W SSS1P35179 80 aa0.83□□□□□ -2.28
TRM3YDL112W YFR009W-AP0C5M9 85 aa0.82□□□□□ -2.28
TRM3YDL112W YML108WQ03759 105 aa0.82□□□□□ -2.28
TRM3YDL112W YIL134C-AQ45U18 67 aa0.82□□□□□ -2.28
TRM3YDL112W YJR107C-AP0CT86 78 aa0.82□□□□□ -2.28
TRM3YDL112W YJL133C-AQ3E7A3 74 aa0.82□□□□□ -2.28
TRM3YDL112W YHR213W-BQ8TGK1 99 aa0.82□□□□□ -2.28
TRM3YDL112W COF1Q03048 143 aaKnown RBP0.81□□□□□ -2.28
TRM3YDL112W PAI3P01094 68 aa0.81□□□□□ -2.28
TRM3YDL112W LIP1Q03579 150 aa0.81□□□□□ -2.28
TRM3YDL112W YLR363W-AQ3E747 85 aa0.81□□□□□ -2.28
TRM3YDL112W YDL085C-AQ3E7B7 68 aaKnown RBP0.81□□□□□ -2.28
TRM3YDL112W YCR050CP25630 102 aa0.8□□□□□ -2.28
TRM3YDL112W ICS3P47034 131 aa0.8□□□□□ -2.28
TRM3YDL112W NAT5Q08689 176 aa0.8□□□□□ -2.28
TRM3YDL112W YOR034C-AQ3E735 80 aa0.8□□□□□ -2.28
TRM3YDL112W YBR016WP38216 128 aa0.8□□□□□ -2.28
TRM3YDL112W RPL36AP05745 100 aaPredicted RBP0.8□□□□□ -2.28
TRM3YDL112W YPR153WQ06537 140 aa0.8□□□□□ -2.28
TRM3YDL112W EDC1P53080 175 aaPredicted RBP0.79□□□□□ -2.28
TRM3YDL112W YML054C-AQ3E809 52 aa0.79□□□□□ -2.28
TRM3YDL112W YER187WP40102 141 aa0.79□□□□□ -2.28
TRM3YDL112W YIL102C-AQ2V2P5 75 aa0.79□□□□□ -2.28
TRM3YDL112W YOR316C-AQ3E806 69 aa0.79□□□□□ -2.28
TRM3YDL112W RAD6P06104 172 aa0.78□□□□□ -2.28
TRM3YDL112W YOR304C-AO14468 76 aa0.78□□□□□ -2.28
TRM3YDL112W YDR381C-AQ3E6R5 114 aa0.78□□□□□ -2.28
TRM3YDL112W GLC8P41818 229 aa0.78□□□□□ -2.29
TRM3YDL112W SEN15Q04675 128 aa0.78□□□□□ -2.29
TRM3YDL112W YBL008W-AQ3E821 79 aa0.78□□□□□ -2.29
TRM3YDL112W YAR064WP39563 99 aa0.77□□□□□ -2.29
TRM3YDL112W SAE3P89114 91 aa0.77□□□□□ -2.29
TRM3YDL112W TDA2P40045 126 aa0.77□□□□□ -2.29
TRM3YDL112W YOL014WQ08110 124 aa0.76□□□□□ -2.29
TRM3YDL112W YHL042WP38729 150 aa0.76□□□□□ -2.29
TRM3YDL112W SKI6P46948 246 aaPredicted RBP0.76□□□□□ -2.29
TRM3YDL112W LSM8P47093 109 aaKnown RBP0.75□□□□□ -2.29
TRM3YDL112W ATP20Q12233 115 aa0.75□□□□□ -2.29
TRM3YDL112W RPL37AP49166 88 aaKnown RBP0.75□□□□□ -2.29
TRM3YDL112W YHR086W-AQ3E746 53 aa0.75□□□□□ -2.29
TRM3YDL112W YCR085WP25650 117 aa0.75□□□□□ -2.29
TRM3YDL112W AIM4P38305 123 aaPredicted RBP0.75□□□□□ -2.29
TRM3YDL112W YLR361C-AQ3E795 98 aa0.75□□□□□ -2.29
TRM3YDL112W YHR032W-AP0C5N6 59 aa0.74□□□□□ -2.29
TRM3YDL112W YPR170W-BP0C5R9 85 aa0.74□□□□□ -2.29
TRM3YDL112W RPA12P32529 125 aaKnown RBP0.74□□□□□ -2.29
TRM3YDL112W YGR146C-AQ8TGT9 53 aa0.74□□□□□ -2.29
TRM3YDL112W YNL198CP40166 100 aa0.73□□□□□ -2.29
TRM3YDL112W COX8P04039 78 aa0.72□□□□□ -2.29
TRM3YDL112W YJL144WP47009 104 aa0.71□□□□□ -2.3
TRM3YDL112W TIM11P81449 96 aaPredicted RBP0.71□□□□□ -2.3
TRM3YDL112W YOL013W-AP0C272 63 aaPredicted RBP0.71□□□□□ -2.3
TRM3YDL112W PBI2P0CT04 75 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms