RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C KSH1Q8TGJ3 72 aa2.51□□□□□ -2.01
RPN6YDL097C HMRA2P0CY13 119 aa2.5□□□□□ -2.01
RPN6YDL097C UBC4P15731 148 aa2.5□□□□□ -2.01
RPN6YDL097C MSA2P36157 363 aa2.5□□□□□ -2.01
RPN6YDL097C DSE2P38844 325 aa2.5□□□□□ -2.01
RPN6YDL097C VTC1P40046 129 aaRIP-Chip data2.5□□□□□ -2.01not detected
RPN6YDL097C EMC6Q12431 108 aa2.5□□□□□ -2.01
RPN6YDL097C DCV1P43595 202 aa2.49□□□□□ -2.01
RPN6YDL097C YMR141CP40211 102 aa2.48□□□□□ -2.01
RPN6YDL097C HUA1P40325 198 aa2.48□□□□□ -2.01
RPN6YDL097C SFT1P43682 97 aa2.48□□□□□ -2.01
RPN6YDL097C YER187WP40102 141 aa2.47□□□□□ -2.01
RPN6YDL097C PEX17P40155 199 aa2.47□□□□□ -2.01
RPN6YDL097C RPL37BP51402 88 aaKnown RBP2.47□□□□□ -2.01
RPN6YDL097C YKL183C-AQ3E765 70 aa2.47□□□□□ -2.01
RPN6YDL097C YOR008C-AQ3E7B9 74 aa2.47□□□□□ -2.01
RPN6YDL097C BET1P22804 142 aa2.46□□□□□ -2.02
RPN6YDL097C MRPS12P53732 153 aa2.46□□□□□ -2.02
RPN6YDL097C YDR246W-AQ3E763 66 aa2.46□□□□□ -2.02
RPN6YDL097C HUR1P45820 110 aa2.45□□□□□ -2.02
RPN6YDL097C YMR122W-AQ3E842 84 aa2.45□□□□□ -2.02
RPN6YDL097C RPL28P02406 149 aaKnown RBP2.44□□□□□ -2.02
RPN6YDL097C QCR8P08525 94 aa2.44□□□□□ -2.02
RPN6YDL097C YLR156WP0CE96 114 aa2.44□□□□□ -2.02
RPN6YDL097C YLR159WP0CE97 114 aa2.44□□□□□ -2.02
RPN6YDL097C YLR161WP0CE98 114 aa2.44□□□□□ -2.02
RPN6YDL097C SMD1Q02260 146 aaPredicted RBP2.44□□□□□ -2.02
RPN6YDL097C TDA8Q6B2U8 126 aa2.44□□□□□ -2.02
RPN6YDL097C YAL065CO13511 128 aa2.43□□□□□ -2.02
RPN6YDL097C ATP15P21306 62 aa2.43□□□□□ -2.02
RPN6YDL097C YAR029WP39549 74 aa2.43□□□□□ -2.02
RPN6YDL097C AIM4P38305 123 aaPredicted RBP2.42□□□□□ -2.02
RPN6YDL097C SHU1P38751 150 aa2.42□□□□□ -2.02
RPN6YDL097C YAL064WP39711 94 aa2.42□□□□□ -2.02
RPN6YDL097C RPS29AP41057 56 aaKnown RBP2.42□□□□□ -2.02
RPN6YDL097C YJR146WP47174 117 aa2.42□□□□□ -2.02
RPN6YDL097C RGM1Q00453 211 aa2.42□□□□□ -2.02
RPN6YDL097C YLR285C-AQ3E771 56 aa2.42□□□□□ -2.02
RPN6YDL097C YBL008W-AQ3E821 79 aa2.42□□□□□ -2.02
RPN6YDL097C YLR236CA0A023PZG4 107 aa2.42□□□□□ -2.02
RPN6YDL097C ARC15P40518 154 aaRIP-Chip data2.42□□□□□ -2.02not detected
RPN6YDL097C YGL034CP53186 121 aa2.42□□□□□ -2.02
RPN6YDL097C YNL190WP53872 204 aa2.42□□□□□ -2.02
RPN6YDL097C PMP3P87284 55 aa2.42□□□□□ -2.02
RPN6YDL097C IRC21Q04772 201 aa2.42□□□□□ -2.02
RPN6YDL097C YOR314WQ12506 109 aa2.42□□□□□ -2.02
RPN6YDL097C YBR200W-AQ3E755 54 aa2.42□□□□□ -2.02
RPN6YDL097C YDR182W-AQ3E796 67 aa2.42□□□□□ -2.02
RPN6YDL097C YFL019CP43576 117 aa2.41□□□□□ -2.02
RPN6YDL097C ICY1Q04329 127 aa2.41□□□□□ -2.02
RPN6YDL097C YOR268CQ08734 132 aa2.41□□□□□ -2.02
RPN6YDL097C ATP20Q12233 115 aa2.41□□□□□ -2.02
RPN6YDL097C YKL065W-AQ2V2P2 73 aa2.41□□□□□ -2.02
RPN6YDL097C YOR020W-AQ3E824 90 aa2.41□□□□□ -2.02
RPN6YDL097C RPL36BO14455 100 aaKnown RBP2.4□□□□□ -2.03
RPN6YDL097C RPL36AP05745 100 aaPredicted RBP2.4□□□□□ -2.03
RPN6YDL097C YJR107C-AP0CT86 78 aa2.4□□□□□ -2.03
RPN6YDL097C YBR209WP38311 105 aa2.4□□□□□ -2.03
RPN6YDL097C RSM18P40033 138 aa2.4□□□□□ -2.03
RPN6YDL097C YLR162WQ06235 118 aa2.4□□□□□ -2.03
RPN6YDL097C ICS3P47034 131 aa2.39□□□□□ -2.03
RPN6YDL097C YGR121W-AQ3E816 71 aa2.39□□□□□ -2.03
RPN6YDL097C YHL005CP38752 130 aa2.38□□□□□ -2.03
RPN6YDL097C ATP18P81450 59 aa2.38□□□□□ -2.03
RPN6YDL097C YMR295CQ03559 197 aa2.38□□□□□ -2.03
RPN6YDL097C MIC10Q96VH5 97 aa2.38□□□□□ -2.03
RPN6YDL097C MPC3P53311 146 aa2.37□□□□□ -2.03
RPN6YDL097C RPL26AP05743 127 aaKnown RBP2.36□□□□□ -2.03
RPN6YDL097C YEL008WP40001 126 aa2.36□□□□□ -2.03
RPN6YDL097C RPL26BP53221 127 aaKnown RBP2.36□□□□□ -2.03
RPN6YDL097C YGL041C-BQ3E750 60 aa2.36□□□□□ -2.03
RPN6YDL097C YOR381W-AQ3E804 55 aa2.36□□□□□ -2.03
RPN6YDL097C YOL166W-AQ8TGJ1 51 aa2.36□□□□□ -2.03
RPN6YDL097C EDC1P53080 175 aaPredicted RBP2.35□□□□□ -2.03
RPN6YDL097C NOP10Q6Q547 58 aaPredicted RBP2.35□□□□□ -2.03
RPN6YDL097C RPC10P40422 70 aa2.34□□□□□ -2.04
RPN6YDL097C YOR034C-AQ3E735 80 aa2.34□□□□□ -2.04
RPN6YDL097C YER188C-AP0C0V2 99 aa2.33□□□□□ -2.04
RPN6YDL097C YFR009W-AP0C5M9 85 aa2.33□□□□□ -2.04
RPN6YDL097C TDA2P40045 126 aa2.33□□□□□ -2.04
RPN6YDL097C YGL193CP53097 103 aa2.33□□□□□ -2.04
RPN6YDL097C YMR122CQ03879 124 aa2.33□□□□□ -2.04
RPN6YDL097C YML100W-AQ8TGT0 57 aa2.33□□□□□ -2.04
RPN6YDL097C SPG1P50088 95 aa2.32□□□□□ -2.04
RPN6YDL097C TSC3Q3E790 80 aa2.32□□□□□ -2.04
RPN6YDL097C YLL006W-AQ3E814 58 aa2.32□□□□□ -2.04
RPN6YDL097C OST5Q92316 86 aa2.32□□□□□ -2.04
RPN6YDL097C RPL29P05747 59 aaPredicted RBP2.31□□□□□ -2.04
RPN6YDL097C RPS30AP0CX33 63 aaKnown RBP2.3□□□□□ -2.04
RPN6YDL097C RPS30BP0CX34 63 aaKnown RBP2.3□□□□□ -2.04
RPN6YDL097C RPS29BP41058 56 aaKnown RBP2.3□□□□□ -2.04
RPN6YDL097C COX23P38824 151 aa2.29□□□□□ -2.04
RPN6YDL097C RPL38P49167 78 aaKnown RBP2.29□□□□□ -2.04
RPN6YDL097C YOR376W-AQ3E805 51 aa2.29□□□□□ -2.04
RPN6YDL097C YBR219CP38317 127 aa2.28□□□□□ -2.04
RPN6YDL097C YGL088WP53151 121 aa2.28□□□□□ -2.04
RPN6YDL097C YPR153WQ06537 140 aa2.28□□□□□ -2.04
RPN6YDL097C YDL241WQ07738 123 aa2.28□□□□□ -2.04
RPN6YDL097C HUB1Q6Q546 73 aa2.28□□□□□ -2.04
RPN6YDL097C YDL012CQ12489 107 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms