RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C PAU7P39545 55 aa1.63□□□□□ -2.15
YPK3YBR028C SNQ2P32568 1501 aaKnown RBP1.62□□□□□ -2.15
YPK3YBR028C MMS1Q06211 1407 aa1.62□□□□□ -2.15
YPK3YBR028C RPO21P04050 1733 aaKnown RBP1.62□□□□□ -2.15
YPK3YBR028C DNF3Q12674 1656 aa1.62□□□□□ -2.15
YPK3YBR028C YBR201C-AQ2V2Q3 67 aa1.62□□□□□ -2.15
YPK3YBR028C YDR246W-AQ3E763 66 aa1.62□□□□□ -2.15
YPK3YBR028C Q0032Q9ZZX7 96 aa1.61□□□□□ -2.15
YPK3YBR028C YOL097W-AQ3E7Y9 61 aa1.6□□□□□ -2.15
YPK3YBR028C SSK2P53599 1579 aa1.6□□□□□ -2.15
YPK3YBR028C HAP1P0CE41 1502 aa1.6□□□□□ -2.15
YPK3YBR028C SPO14P36126 1683 aa1.6□□□□□ -2.15
YPK3YBR028C SPT6P23615 1451 aaKnown RBP1.6□□□□□ -2.15
YPK3YBR028C HHY1P39982 102 aa1.59□□□□□ -2.15
YPK3YBR028C ATP18P81450 59 aa1.59□□□□□ -2.15
YPK3YBR028C BCK1Q01389 1478 aa1.59□□□□□ -2.16
YPK3YBR028C COX7P10174 60 aa1.59□□□□□ -2.16
YPK3YBR028C SGF11Q03067 99 aa1.59□□□□□ -2.16
YPK3YBR028C TY3B-GQ99315 1547 aa1.58□□□□□ -2.16
YPK3YBR028C BLM10P43583 2143 aa1.58□□□□□ -2.16
YPK3YBR028C TY2B-LR1P0C2J3 1770 aa1.58□□□□□ -2.16
YPK3YBR028C TY2B-FP0CX63 1770 aa1.58□□□□□ -2.16
YPK3YBR028C TY2B-GR2P0CX64 1770 aa1.58□□□□□ -2.16
YPK3YBR028C TY2B-DR2Q03494 1770 aa1.58□□□□□ -2.16
YPK3YBR028C TY2B-OR1Q12113 1770 aa1.58□□□□□ -2.16
YPK3YBR028C TY2B-BQ12491 1770 aa1.58□□□□□ -2.16
YPK3YBR028C TY2B-OR2Q12501 1770 aa1.58□□□□□ -2.16
YPK3YBR028C APC1P53886 1748 aa1.58□□□□□ -2.16
YPK3YBR028C ARO1P08566 1588 aaKnown RBP1.58□□□□□ -2.16
YPK3YBR028C ATP17Q06405 101 aa1.58□□□□□ -2.16
YPK3YBR028C YHR213W-BQ8TGK1 99 aa1.58□□□□□ -2.16
YPK3YBR028C VTH1P40438 1549 aa1.58□□□□□ -2.16
YPK3YBR028C VTH2P40890 1549 aa1.58□□□□□ -2.16
YPK3YBR028C TY2B-DR3Q07791 1770 aaKnown RBP1.58□□□□□ -2.16
YPK3YBR028C YKL023C-AQ2V2P3 75 aa1.57□□□□□ -2.16
YPK3YBR028C YDR182W-AQ3E796 67 aa1.57□□□□□ -2.16
YPK3YBR028C RIM15P43565 1770 aa1.57□□□□□ -2.16
YPK3YBR028C DNF2Q12675 1612 aa1.57□□□□□ -2.16
YPK3YBR028C YMR141CP40211 102 aa1.56□□□□□ -2.16
YPK3YBR028C YOR032W-AQ8TGS1 66 aa1.56□□□□□ -2.16
YPK3YBR028C YBR072C-AQ3E794 53 aa1.55□□□□□ -2.16
YPK3YBR028C YKL018C-AQ3E7A7 99 aa1.55□□□□□ -2.16
YPK3YBR028C CDC25P04821 1589 aa1.55□□□□□ -2.16
YPK3YBR028C SDH6Q3E785 79 aa1.55□□□□□ -2.16
YPK3YBR028C URA2P07259 2214 aaKnown RBP1.54□□□□□ -2.16
YPK3YBR028C HUB1Q6Q546 73 aa1.54□□□□□ -2.16
YPK3YBR028C RPL38P49167 78 aaKnown RBP1.52□□□□□ -2.17
YPK3YBR028C YOR034C-AQ3E735 80 aa1.52□□□□□ -2.17
YPK3YBR028C YNL190WP53872 204 aa1.51□□□□□ -2.17
YPK3YBR028C RPS30AP0CX33 63 aaKnown RBP1.51□□□□□ -2.17
YPK3YBR028C RPS30BP0CX34 63 aaKnown RBP1.51□□□□□ -2.17
YPK3YBR028C YBT1P32386 1661 aa1.5□□□□□ -2.17
YPK3YBR028C IRC20Q06554 1556 aa1.5□□□□□ -2.17
YPK3YBR028C YPR108W-AQ3E7B3 70 aa1.5□□□□□ -2.17
YPK3YBR028C YBR032WP38223 100 aa1.49□□□□□ -2.17
YPK3YBR028C PEP1P32319 1579 aa1.49□□□□□ -2.17
YPK3YBR028C VMR1P38735 1592 aa1.49□□□□□ -2.17
YPK3YBR028C RPC10P40422 70 aa1.48□□□□□ -2.17
YPK3YBR028C AUA1P32450 94 aa1.47□□□□□ -2.17
YPK3YBR028C YOL166W-AQ8TGJ1 51 aa1.47□□□□□ -2.17
YPK3YBR028C EDC1P53080 175 aaPredicted RBP1.46□□□□□ -2.18
YPK3YBR028C YJR107C-AP0CT86 78 aa1.45□□□□□ -2.18
YPK3YBR028C YLR146W-AQ2V2P1 62 aa1.45□□□□□ -2.18
YPK3YBR028C ULS1Q08562 1619 aa1.45□□□□□ -2.18
YPK3YBR028C NUP188P52593 1655 aaKnown RBP1.44□□□□□ -2.18
YPK3YBR028C RPL43AP0CX25 92 aaKnown RBP1.44□□□□□ -2.18
YPK3YBR028C RPL43BP0CX26 92 aa1.44□□□□□ -2.18
YPK3YBR028C USO1P25386 1790 aa1.44□□□□□ -2.18
YPK3YBR028C YOR093CQ12275 1648 aa1.44□□□□□ -2.18
YPK3YBR028C YBL039W-BP0C268 59 aa1.42□□□□□ -2.18
YPK3YBR028C YOR011W-AQ3E807 68 aa1.42□□□□□ -2.18
YPK3YBR028C SNF2P22082 1703 aa1.42□□□□□ -2.18
YPK3YBR028C YBR200W-AQ3E755 54 aa1.41□□□□□ -2.18
YPK3YBR028C PDR15Q04182 1529 aaKnown RBP1.41□□□□□ -2.18
YPK3YBR028C HKR1P41809 1802 aa1.4□□□□□ -2.18
YPK3YBR028C YMR001C-AQ8TGS9 76 aa1.39□□□□□ -2.19
YPK3YBR028C KOG1P38873 1557 aa1.39□□□□□ -2.19
YPK3YBR028C YOR192C-CQ3E736 78 aa1.38□□□□□ -2.19
YPK3YBR028C YLR307C-AQ3E825 87 aa1.38□□□□□ -2.19
YPK3YBR028C THO2P53552 1597 aaKnown RBP1.38□□□□□ -2.19
YPK3YBR028C YLR157W-EP0CF00 54 aa1.38□□□□□ -2.19
YPK3YBR028C STU1P38198 1513 aa1.37□□□□□ -2.19
YPK3YBR028C YLR157W-DP0CE99 70 aa1.37□□□□□ -2.19
YPK3YBR028C YOR394C-AQ8TGJ0 55 aa1.37□□□□□ -2.19
YPK3YBR028C RKR1Q04781 1562 aa1.34□□□□□ -2.19
YPK3YBR028C RPS27AP35997 82 aaKnown RBP1.34□□□□□ -2.2
YPK3YBR028C OLI1P61829 76 aa1.34□□□□□ -2.2
YPK3YBR028C YOL164W-AQ3E7A5 60 aa1.34□□□□□ -2.2
YPK3YBR028C NUP192P47054 1683 aa1.33□□□□□ -2.2
YPK3YBR028C YGR025WP53216 100 aa1.31□□□□□ -2.2
YPK3YBR028C YBR016WP38216 128 aa1.3□□□□□ -2.2
YPK3YBR028C YBR230W-AQ3E762 66 aa1.29□□□□□ -2.2
YPK3YBR028C NUP170P38181 1502 aa1.29□□□□□ -2.2
YPK3YBR028C YFR009W-AP0C5M9 85 aa1.27□□□□□ -2.21
YPK3YBR028C HIR3P47171 1648 aa1.26□□□□□ -2.21
YPK3YBR028C MLP2P40457 1679 aa1.25□□□□□ -2.21
YPK3YBR028C BUD3P25558 1636 aa1.24□□□□□ -2.21
YPK3YBR028C YBL044WP38194 122 aa1.24□□□□□ -2.21
YPK3YBR028C SEN1Q00416 2231 aaKnown RBP1.22□□□□□ -2.21
YPK3YBR028C SMX2P40204 77 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms