RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 PAU10Q03050 120 aa-2.72□□□□□ -2.84
snR78snR78 YBR201C-AQ2V2Q3 67 aa-2.72□□□□□ -2.84
snR78snR78 PAU9Q3E770 120 aa-2.72□□□□□ -2.84
snR78snR78 TY2B-LR1P0C2J3 1770 aa-2.72□□□□□ -2.85
snR78snR78 TY2B-FP0CX63 1770 aa-2.72□□□□□ -2.85
snR78snR78 TY2B-GR2P0CX64 1770 aa-2.72□□□□□ -2.85
snR78snR78 TY2B-CP25384 1770 aa-2.72□□□□□ -2.85
snR78snR78 TY2B-DR2Q03494 1770 aa-2.72□□□□□ -2.85
snR78snR78 TY2B-DR3Q07791 1770 aaKnown RBP-2.72□□□□□ -2.85
snR78snR78 TY2B-OR1Q12113 1770 aa-2.72□□□□□ -2.85
snR78snR78 TY2B-DR1Q12472 1770 aa-2.72□□□□□ -2.85
snR78snR78 TY2B-BQ12491 1770 aa-2.72□□□□□ -2.85
snR78snR78 TY2B-OR2Q12501 1770 aa-2.72□□□□□ -2.85
snR78snR78 YDR182W-AQ3E796 67 aa-2.73□□□□□ -2.85
snR78snR78 RPO21P04050 1733 aaKnown RBP-2.75□□□□□ -2.85
snR78snR78 APS2Q00381 147 aa-2.75□□□□□ -2.85
snR78snR78 YBL071CP38185 102 aa-2.76□□□□□ -2.85
snR78snR78 YLR365WQ7LIF2 110 aa-2.77□□□□□ -2.85
snR78snR78 TY1B-MR1Q04214 1755 aa-2.78□□□□□ -2.85
snR78snR78 PAU4P53427 120 aa-2.79□□□□□ -2.86
snR78snR78 YOR008C-AQ3E7B9 74 aa-2.8□□□□□ -2.86
snR78snR78 STT4P37297 1900 aa-2.8□□□□□ -2.86
snR78snR78 BPT1P14772 1559 aa-2.81□□□□□ -2.86
snR78snR78 NKP2Q06162 153 aa-2.81□□□□□ -2.86
snR78snR78 YKL018C-AQ3E7A7 99 aa-2.81□□□□□ -2.86
snR78snR78 BUD23P25627 275 aaPredicted RBP-2.82□□□□□ -2.86
snR78snR78 VMA21P41806 77 aa-2.83□□□□□ -2.86
snR78snR78 TY1B-NL1Q12112 1755 aa-2.83□□□□□ -2.86
snR78snR78 TY1B-GR3Q12316 1755 aa-2.83□□□□□ -2.86
snR78snR78 SPO14P36126 1683 aa-2.83□□□□□ -2.86
snR78snR78 YBR032WP38223 100 aa-2.84□□□□□ -2.86
snR78snR78 ATP18P81450 59 aa-2.84□□□□□ -2.86
snR78snR78 RTR2Q12378 196 aa-2.84□□□□□ -2.86
snR78snR78 UBC5P15732 148 aa-2.85□□□□□ -2.87
snR78snR78 TY1B-NL2Q99337 1749 aaKnown RBP-2.85□□□□□ -2.87
snR78snR78 PAU5P43575 122 aa-2.86□□□□□ -2.87
snR78snR78 YPR108W-AQ3E7B3 70 aa-2.86□□□□□ -2.87
snR78snR78 YMR122W-AQ3E842 84 aa-2.86□□□□□ -2.87
snR78snR78 VTH1P40438 1549 aa-2.87□□□□□ -2.87
snR78snR78 VTH2P40890 1549 aa-2.87□□□□□ -2.87
snR78snR78 YHR214C-DP0CX93 97 aa-2.87□□□□□ -2.87
snR78snR78 YCR085WP25650 117 aa-2.87□□□□□ -2.87
snR78snR78 RPB11P38902 120 aa-2.87□□□□□ -2.87
snR78snR78 YAR029WP39549 74 aa-2.89□□□□□ -2.87
snR78snR78 SWC7Q06707 132 aa-2.9□□□□□ -2.87
snR78snR78 TY1B-ER2Q03619 1755 aa-2.9□□□□□ -2.87
snR78snR78 TY1B-LR1Q12088 1755 aaKnown RBP-2.9□□□□□ -2.87
snR78snR78 SPC1P46965 94 aa-2.91□□□□□ -2.88
snR78snR78 ECM29P38737 1868 aa-2.92□□□□□ -2.88
snR78snR78 MRP49P32388 137 aa-2.92□□□□□ -2.88
snR78snR78 YBR090CP38253 122 aa-2.92□□□□□ -2.88
snR78snR78 TOS6P48560 102 aa-2.92□□□□□ -2.88
snR78snR78 YAL065CO13511 128 aa-2.93□□□□□ -2.88
snR78snR78 KRE5P22023 1365 aa-2.93□□□□□ -2.88
snR78snR78 NHP10Q03435 203 aa-2.94□□□□□ -2.88
snR78snR78 LYS2P07702 1392 aa-2.97□□□□□ -2.88
snR78snR78 EMC5P40540 141 aa-2.97□□□□□ -2.88
snR78snR78 SPC2Q04969 178 aa-2.97□□□□□ -2.88
snR78snR78 TY3B-IQ7LHG5 1498 aaKnown RBP-2.97□□□□□ -2.89
snR78snR78 SIP18P50263 79 aa-2.98□□□□□ -2.89
snR78snR78 YOR289WQ12012 251 aaPredicted RBP-2.98□□□□□ -2.89
snR78snR78 BSC4P53841 131 aa-3□□□□□ -2.89
snR78snR78 YOS1Q3E834 85 aa-3.01□□□□□ -2.89
snR78snR78 GNA1P43577 159 aaPredicted RBP-3.03□□□□□ -2.89
snR78snR78 DYN2Q02647 92 aa-3.03□□□□□ -2.89
snR78snR78 YOL097W-AQ3E7Y9 61 aa-3.03□□□□□ -2.89
snR78snR78 YLR099W-AQ3E798 87 aa-3.04□□□□□ -2.9
snR78snR78 RPS27AP35997 82 aaKnown RBP-3.07□□□□□ -2.9
snR78snR78 YHL005CP38752 130 aa-3.08□□□□□ -2.9
snR78snR78 MOT1P32333 1867 aa-3.08□□□□□ -2.9
snR78snR78 FPR2P32472 135 aa-3.09□□□□□ -2.9
snR78snR78 NHP2P32495 156 aaPredicted RBP-3.1□□□□□ -2.91
snR78snR78 RSM19P53733 91 aaPredicted RBP-3.1□□□□□ -2.91
snR78snR78 VMA7P39111 118 aa-3.12□□□□□ -2.91
snR78snR78 SNU13P39990 126 aaKnown RBP-3.12□□□□□ -2.91
snR78snR78 UBC4P15731 148 aa-3.13□□□□□ -2.91
snR78snR78 OLI1P61829 76 aa-3.14□□□□□ -2.91
snR78snR78 YKL068W-AQ3E826 78 aa-3.14□□□□□ -2.91
snR78snR78 PAU23Q07987 124 aa-3.15□□□□□ -2.91
snR78snR78 POC4Q12245 148 aaPredicted RBP-3.15□□□□□ -2.91
snR78snR78 PAU17Q12370 124 aa-3.15□□□□□ -2.91
snR78snR78 LHP1P33399 275 aaKnown RBP-3.16□□□□□ -2.92
snR78snR78 HMRA1P0CY11 126 aa-3.17□□□□□ -2.92
snR78snR78 XRN1P22147 1528 aaKnown RBP-3.18□□□□□ -2.92
snR78snR78 YMR103CQ04436 120 aa-3.18□□□□□ -2.92
snR78snR78 SMC4Q12267 1418 aa-3.19□□□□□ -2.92
snR78snR78 IRC20Q06554 1556 aa-3.2□□□□□ -2.92
snR78snR78 YDR029WQ12111 104 aa-3.2□□□□□ -2.92
snR78snR78 YOR343CQ12484 108 aa-3.2□□□□□ -2.92
snR78snR78 YLL006W-AQ3E814 58 aa-3.2□□□□□ -2.92
snR78snR78 QCR6P00127 147 aa-3.21□□□□□ -2.92
snR78snR78 LSM2P38203 95 aaKnown RBP-3.21□□□□□ -2.92
snR78snR78 YMR090WQ04304 227 aaKnown RBP-3.21□□□□□ -2.92
snR78snR78 YDR524C-BQ3E6R4 66 aa-3.21□□□□□ -2.92
snR78snR78 FYV7Q12247 151 aa-3.22□□□□□ -2.92
snR78snR78 COA2Q3E823 68 aa-3.24□□□□□ -2.93
snR78snR78 NOP10Q6Q547 58 aaPredicted RBP-3.25□□□□□ -2.93
snR78snR78 PDR11P40550 1411 aa-3.27□□□□□ -2.93
snR78snR78 YDR119W-AQ2V2P9 66 aa-3.27□□□□□ -2.93
snR78snR78 RRT15Q3E811 62 aa-3.27□□□□□ -2.93
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms