RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W YER187WP40102 141 aa5.16□□□□□ -1.58
SMK1YPR054W PPT2Q12036 173 aa5.16□□□□□ -1.58
SMK1YPR054W YBR200W-AQ3E755 54 aa5.16□□□□□ -1.58
SMK1YPR054W YMR175W-AQ3E766 64 aa5.16□□□□□ -1.58
SMK1YPR054W HFA1P32874 2273 aa5.16□□□□□ -1.58
SMK1YPR054W YHR022CP38763 256 aa5.15□□□□□ -1.59
SMK1YPR054W YGR025WP53216 100 aa5.15□□□□□ -1.59
SMK1YPR054W PBP4Q07362 185 aaKnown RBP5.15□□□□□ -1.59
SMK1YPR054W YLR042CQ07990 161 aa5.14□□□□□ -1.59
SMK1YPR054W YDL009CQ12210 107 aa5.14□□□□□ -1.59
SMK1YPR054W YLR412C-AQ3E742 68 aa5.14□□□□□ -1.59
SMK1YPR054W YOL085CQ99345 113 aa5.14□□□□□ -1.59
SMK1YPR054W TRA1P38811 3744 aa5.13□□□□□ -1.59
SMK1YPR054W YBR209WP38311 105 aa5.13□□□□□ -1.59
SMK1YPR054W KRE9P39005 276 aa5.13□□□□□ -1.59
SMK1YPR054W YNL194CP40169 301 aa5.13□□□□□ -1.59
SMK1YPR054W ARC15P40518 154 aaRIP-Chip data5.13□□□□□ -1.59not detected
SMK1YPR054W KEG1P43614 200 aa5.13□□□□□ -1.59
SMK1YPR054W RGM1Q00453 211 aa5.13□□□□□ -1.59
SMK1YPR054W KSH1Q8TGJ3 72 aa5.13□□□□□ -1.59
SMK1YPR054W BET1P22804 142 aa5.12□□□□□ -1.59
SMK1YPR054W YRA2P36036 203 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
SMK1YPR054W YGR164WP53291 111 aa5.12□□□□□ -1.59
SMK1YPR054W YML122CQ03207 126 aa5.12□□□□□ -1.59
SMK1YPR054W YDR246W-AQ3E763 66 aa5.12□□□□□ -1.59
SMK1YPR054W YLR285C-AQ3E771 56 aa5.12□□□□□ -1.59
SMK1YPR054W CCW12Q12127 133 aa5.11□□□□□ -1.59
SMK1YPR054W UBC4P15731 148 aa5.1□□□□□ -1.59
SMK1YPR054W YEL008WP40001 126 aa5.1□□□□□ -1.59
SMK1YPR054W YNL046WP53956 172 aa5.1□□□□□ -1.59
SMK1YPR054W SED1Q01589 338 aa5.1□□□□□ -1.59
SMK1YPR054W HAL1Q01766 294 aa5.1□□□□□ -1.59
SMK1YPR054W IRC21Q04772 201 aa5.1□□□□□ -1.59
SMK1YPR054W YOR034C-AQ3E735 80 aa5.1□□□□□ -1.59
SMK1YPR054W YLR236CA0A023PZG4 107 aa5.09□□□□□ -1.59
SMK1YPR054W YBR056W-AI2HB52 66 aa5.09□□□□□ -1.59
SMK1YPR054W YJR107C-AP0CT86 78 aa5.09□□□□□ -1.59
SMK1YPR054W WWM1P43582 211 aaKnown RBP5.09□□□□□ -1.59
SMK1YPR054W YLR156WP0CE96 114 aa5.08□□□□□ -1.6
SMK1YPR054W YLR159WP0CE97 114 aa5.08□□□□□ -1.6
SMK1YPR054W YLR161WP0CE98 114 aa5.08□□□□□ -1.6
SMK1YPR054W AIM4P38305 123 aaPredicted RBP5.08□□□□□ -1.6
SMK1YPR054W YGL088WP53151 121 aa5.08□□□□□ -1.6
SMK1YPR054W YOR020W-AQ3E824 90 aa5.08□□□□□ -1.6
SMK1YPR054W RPL43AP0CX25 92 aaKnown RBP5.07□□□□□ -1.6
SMK1YPR054W RPL43BP0CX26 92 aa5.07□□□□□ -1.6
SMK1YPR054W MIG3P39943 394 aa5.07□□□□□ -1.6
SMK1YPR054W YMR320WQ04897 101 aa5.06□□□□□ -1.6
SMK1YPR054W YLR281CQ05863 155 aa5.06□□□□□ -1.6
SMK1YPR054W ATP20Q12233 115 aa5.06□□□□□ -1.6
SMK1YPR054W RSM19P53733 91 aaPredicted RBP5.05□□□□□ -1.6
SMK1YPR054W TDA8Q6B2U8 126 aa5.05□□□□□ -1.6
SMK1YPR054W YHL037CP38733 133 aa5.04□□□□□ -1.6
SMK1YPR054W RPR2P40571 144 aa5.04□□□□□ -1.6
SMK1YPR054W EDC1P53080 175 aaPredicted RBP5.04□□□□□ -1.6
SMK1YPR054W YCL048W-AQ2V2Q2 79 aa5.04□□□□□ -1.6
SMK1YPR054W YNL146C-AQ3E7Z1 64 aa5.04□□□□□ -1.6
SMK1YPR054W SPS100P13130 326 aa5.03□□□□□ -1.6
SMK1YPR054W GAT4P40569 121 aa5.03□□□□□ -1.6
SMK1YPR054W ATP18P81450 59 aa5.03□□□□□ -1.6
SMK1YPR054W COX14P39103 70 aa5.02□□□□□ -1.61
SMK1YPR054W YFL019CP43576 117 aa5.02□□□□□ -1.61
SMK1YPR054W YFR035CP43608 114 aa5.02□□□□□ -1.61
SMK1YPR054W SFT1P43682 97 aa5.02□□□□□ -1.61
SMK1YPR054W ERI1P62651 68 aaKnown RBP5.02□□□□□ -1.61
SMK1YPR054W SRL1Q08673 210 aa5.02□□□□□ -1.61
SMK1YPR054W YPR013CQ12145 317 aa5.02□□□□□ -1.61
SMK1YPR054W YOR011W-AQ3E807 68 aa5.02□□□□□ -1.61
SMK1YPR054W YLL006W-AQ3E814 58 aa5.02□□□□□ -1.61
SMK1YPR054W MPC3P53311 146 aa5.01□□□□□ -1.61
SMK1YPR054W YMR295CQ03559 197 aa5.01□□□□□ -1.61
SMK1YPR054W YAL065CO13511 128 aa5□□□□□ -1.61
SMK1YPR054W YER135CP40082 130 aa5□□□□□ -1.61
SMK1YPR054W SPG4Q04438 115 aa5□□□□□ -1.61
SMK1YPR054W YKL183C-AQ3E765 70 aa5□□□□□ -1.61
SMK1YPR054W YNL277W-AQ3E7Z0 62 aa5□□□□□ -1.61
SMK1YPR054W YAR029WP39549 74 aa4.99□□□□□ -1.61
SMK1YPR054W BPH1P25356 2167 aa4.98□□□□□ -1.61
SMK1YPR054W YBR219CP38317 127 aa4.97□□□□□ -1.61
SMK1YPR054W PMP3P87284 55 aa4.97□□□□□ -1.61
SMK1YPR054W ICY1Q04329 127 aa4.97□□□□□ -1.61
SMK1YPR054W VAM10Q08474 114 aa4.97□□□□□ -1.61
SMK1YPR054W YFR009W-AP0C5M9 85 aa4.96□□□□□ -1.62
SMK1YPR054W YOR314WQ12506 109 aa4.96□□□□□ -1.62
SMK1YPR054W NOP10Q6Q547 58 aaPredicted RBP4.96□□□□□ -1.62
SMK1YPR054W RSM18P40033 138 aa4.95□□□□□ -1.62
SMK1YPR054W RPL38P49167 78 aaKnown RBP4.95□□□□□ -1.62
SMK1YPR054W YMR244WQ04018 355 aa4.95□□□□□ -1.62
SMK1YPR054W YDR182W-AQ3E796 67 aa4.95□□□□□ -1.62
SMK1YPR054W RRT15Q3E811 62 aa4.95□□□□□ -1.62
SMK1YPR054W RPL36BO14455 100 aaKnown RBP4.94□□□□□ -1.62
SMK1YPR054W RPL36AP05745 100 aaPredicted RBP4.94□□□□□ -1.62
SMK1YPR054W MRPS8Q03799 155 aa4.94□□□□□ -1.62
SMK1YPR054W YLR162WQ06235 118 aa4.94□□□□□ -1.62
SMK1YPR054W YOR268CQ08734 132 aa4.94□□□□□ -1.62
SMK1YPR054W TDA2P40045 126 aa4.93□□□□□ -1.62
SMK1YPR054W YGR121W-AQ3E816 71 aa4.93□□□□□ -1.62
SMK1YPR054W RPL26AP05743 127 aaKnown RBP4.92□□□□□ -1.62
SMK1YPR054W ICS3P47034 131 aa4.92□□□□□ -1.62
SMK1YPR054W RPL26BP53221 127 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms